Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_015293.1 Length=30651 Score E Sequences producing significant alignments: (Bits) Value seq104206 145 1e-30 >seq104206 Length=286 Score = 145 bits (160), Expect = 1e-30 Identities = 190/263 (72%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 2001 ACAACAATTTCAGTGGTGTACTTTTCTTGACCTTGTTGGTCAGTCCATTTGCGGGTTTTT 2060 ||||||||||| || ||||| |||| ||| | ||| || |||||| | |||| Sbjct 24 ACAACAATTTCTGTAGTGTAGCGTTCTAAACCATTTTGATCCTGCCATTTTCTAGTTTGC 83 Query 2061 AACTTGCCTTCAATGTATAGCTTACTACCCTTACGTACATACTCGCCGATTATTTCAGCT 2120 || |||||||| |||| | | ||| || || | ||| ||||| ||||||||| Sbjct 84 AATGATCCTTCAATATATACTTGAGAACCTTTTCGAAGATATTCGCCTGCAATTTCAGCT 143 Query 2121 AACTTTCCAAAAACAACAATTCTGTGCCACTCGGTTTCTTCTTTTGGCTCGCCAGTGCTT 2180 || || ||||| | ||| ||||| ||||| || |||| |||||| || ||||| || Sbjct 144 AATTTACCAAATAAAACTATTCTATGCCATTCAGTTTTTTCTTTATTTTCTCCAGTATTT 203 Query 2181 TTATCCTTCCATTTTTCGCTAGTTGCTAGAGTTAGGTTTGCCACTGCATTTCCGTTAGGT 2240 ||||| ||||| ||||| |||||||| || | || | || ||||| || ||||| Sbjct 204 TTATCTTTCCAATTTTCTGAAGTTGCTAATGTCATATTCACTACCGCATTACCATTAGGC 263 Query 2241 ATGTAACGAATTTCTGGATCTTG 2263 || ||||||| ||| |||||||| Sbjct 264 ATATAACGAACTTCAGGATCTTG 286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97650735270968