Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_016071.1 Length=145964 Score E Sequences producing significant alignments: (Bits) Value seq158858 89.7 5e-13 >seq158858 Length=235449 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/226 (69%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 72376 GTTGCTTTCACAGCCATACCCAGTGAATCACGAGTTGTGTACTGGGTTGTGTAAGAACCA 72435 || ||||||| ||| | || || ||||| ||||| || ||| || ||||| || Sbjct 214841 GTAGCTTTCATAGCAAACCCTAGAGAATCGCGAGTCTGATATTGGAAAGTATAAGATCCC 214782 Query 72436 ACACCGTACACGATGTTACTCGATGCAAAGCCACGATCTTTCAGTCGTTCAAAGATATCT 72495 || ||| | || | ||| | || |||||||| |||| | |||| ||| || Sbjct 214781 ACGCCGAAAACAACGTTTGTTGAAGCAAAGCCTTTTTCTTCTAACTTCTCAACAATAGCT 214722 Query 72496 TTTGCACGAGCAACAGTGATAGAGTCACCGTAGATCAGGCCGACATGACTATCAAGAACT 72555 |||||||| ||| ||| ||||||||||| ||||| || | |||| |||| | | | Sbjct 214721 TTTGCACGCTCAAGAGTAATAGAGTCACCATAGATTGCACCAATATGAGTATCTAATAGT 214662 Query 72556 TTGTA-CCCTTTGGAGTTAACTTCTCCACCAAAGATTTCCCACAAA 72600 || || ||||| ||| || | |||||||||||| ||||| ||| Sbjct 214661 TTATAACCCTTCTCAGT-AATTGTTCCACCAAAGATATCCCATAAA 214617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 465397000853120