Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_016071.1
Length=145964
Score E
Sequences producing significant alignments: (Bits) Value
seq158858 89.7 5e-13
>seq158858
Length=235449
Score = 89.7 bits (98), Expect = 5e-13
Identities = 157/226 (69%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 72376 GTTGCTTTCACAGCCATACCCAGTGAATCACGAGTTGTGTACTGGGTTGTGTAAGAACCA 72435
|| ||||||| ||| | || || ||||| ||||| || ||| || ||||| ||
Sbjct 214841 GTAGCTTTCATAGCAAACCCTAGAGAATCGCGAGTCTGATATTGGAAAGTATAAGATCCC 214782
Query 72436 ACACCGTACACGATGTTACTCGATGCAAAGCCACGATCTTTCAGTCGTTCAAAGATATCT 72495
|| ||| | || | ||| | || |||||||| |||| | |||| ||| ||
Sbjct 214781 ACGCCGAAAACAACGTTTGTTGAAGCAAAGCCTTTTTCTTCTAACTTCTCAACAATAGCT 214722
Query 72496 TTTGCACGAGCAACAGTGATAGAGTCACCGTAGATCAGGCCGACATGACTATCAAGAACT 72555
|||||||| ||| ||| ||||||||||| ||||| || | |||| |||| | | |
Sbjct 214721 TTTGCACGCTCAAGAGTAATAGAGTCACCATAGATTGCACCAATATGAGTATCTAATAGT 214662
Query 72556 TTGTA-CCCTTTGGAGTTAACTTCTCCACCAAAGATTTCCCACAAA 72600
|| || ||||| ||| || | |||||||||||| ||||| |||
Sbjct 214661 TTATAACCCTTCTCAGT-AATTGTTCCACCAAAGATATCCCATAAA 214617
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 465397000853120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |