Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq146431 138 1e-27 >seq146431 Length=15796 Score = 138 bits (152), Expect = 1e-27 Identities = 350/527 (66%), Gaps = 9/527 (2%) Strand=Plus/Plus Query 37173 AAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTT 37232 ||||| || |||||||| ||||||||||| |||| |||||||| ||||| |||||| Sbjct 4125 AAACAAGCGAAATCACAGTGTAAACCTTCGTCTCGTGAGATCAATTCGTTAGAGAAGGTT 4184 Query 37233 AATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGAT-CCAGAAAA 37291 ||||| ||||| | || | ||| |||| ||| || || | || ||| | || || || Sbjct 4185 AATCCAGGCATGAGTCCACGTTTCTTAAGCCAGAAAATCG-AACAGAAGCTACCTGAGAA 4243 Query 37292 GAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATC 37351 ||| ||||||||||| || || ||||| | ||| | | |||||| | | | Sbjct 4244 GAAGATACCTTCAACACAAGCGAAAGCTACGATTCGTTCAGCAAAAGTT---TGAGATCC 4300 Query 37352 AGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGC 37411 | ||||| | | | ||| | || || |||||| ||||||||| | ||| Sbjct 4301 ATCGATCCAAGTCATAGCCCATTGAGCTTTCTTAGCAACACAAGGAATTGTTTCGACTGC 4360 Query 37412 TTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATA 37471 || ||| | | | |||| ||||| | || |||||||| | || | |||||| Sbjct 4361 GCGGAATAGATGATCTCTCTCTTTGTTATCTTTGATGTAAGTATCGAGTAAGAGACTATA 4420 Query 37472 CATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGA 37531 ||| ||||| || ||||| ||||| || || ||||| || || || | ||||| || Sbjct 4421 CATCTCAGAATGGATATTCTCAATCGCGATTTGAAATCCGTAGAATGCACGCGCTTCGGA 4480 Query 37532 TAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGC 37591 | ||| ||||| | || | ||| | ||||| || || || ||| || Sbjct 4481 GACTTGTACATCTGACATGAATCGAGAAGCGAGATTTTCGAGGACGATTCCGTCAGATGC 4540 Query 37592 TGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAT--TTGATAATTTTTTC 37649 || ||||| || || || | ||| || || || | ||| | | |||| | |||| | Sbjct 4541 GGCGAAGAAGGCGAGGACGTGTTTGATGAAGTGACGTTCTCCGTCGTTGAGA--TTTTCC 4598 Query 37650 CAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAA 37696 || ||| |||| ||||| ||| ||||| || ||||||| || Sbjct 4599 CAGTCACGTCCGTCTTGTGATAGATCTACTTCTTCGGCGGTCCAGAA 4645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590338254577120