Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_017972.1 Length=280538 Score E Sequences producing significant alignments: (Bits) Value seq249645 113 8e-20 >seq249645 Length=476466 Score = 113 bits (124), Expect = 8e-20 Identities = 177/248 (71%), Gaps = 8/248 (3%) Strand=Plus/Plus Query 22979 CATCAGATTCAAAGAACAGAATTTGTGCGCAACCTTCGCCAGCGTAGATCAGTGCCGGGC 23038 ||||| || ||||||| |||||||| ||||| || || || || | || || Sbjct 450825 CATCACTTTGGAAGAACAACATTTGTGCTACGCCTTCCCCCGCATAAATACGCGCTGGTA 450884 Query 23039 --TTGGT-GTGGTATTGGAAAACTCCAGAGTAAGCGAG-CCTTTCCATTCTGGTTCCAGC 23094 ||||| ||| || | |||||| | || | || | |||| |||||| || || ||| Sbjct 450885 AATTGGTTGTGTTACT---AAACTCTAAGGTGA-CGTGTCCTTCCCATTCAGGCTCAAGC 450940 Query 23095 GGCGTGACGTTTACGATGATGCCGCAACGCGCATACGTCGATTTGCCGAGGCAGATAACT 23154 ||||||||||| |||||||| ||||| ||||| ||||| |||||||| || || ||| | Sbjct 450941 GGCGTGACGTTGACGATGATACCGCAGCGCGCGTACGTTGATTTGCCAAGACAAATAGTT 451000 Query 23155 AATACGTCACGCGGAATGTTGAAGTGTTCCGGCGTGTTTGCCAGTGCGAAACTGTTCGGC 23214 |||||||| || ||||| ||| | ||| ||| ||| || || || ||| ||| Sbjct 451001 AATACGTCGCGTGGAATACGGAAATACTCCATCGTACGTGCTAGCGCAAACGAGTTAGGC 451060 Query 23215 GGAATGAT 23222 || || || Sbjct 451061 GGGATAAT 451068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 894595323218240