Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_017972.1
Length=280538
Score E
Sequences producing significant alignments: (Bits) Value
seq249645 113 8e-20
>seq249645
Length=476466
Score = 113 bits (124), Expect = 8e-20
Identities = 177/248 (71%), Gaps = 8/248 (3%)
Strand=Plus/Plus
Query 22979 CATCAGATTCAAAGAACAGAATTTGTGCGCAACCTTCGCCAGCGTAGATCAGTGCCGGGC 23038
||||| || ||||||| |||||||| ||||| || || || || | || ||
Sbjct 450825 CATCACTTTGGAAGAACAACATTTGTGCTACGCCTTCCCCCGCATAAATACGCGCTGGTA 450884
Query 23039 --TTGGT-GTGGTATTGGAAAACTCCAGAGTAAGCGAG-CCTTTCCATTCTGGTTCCAGC 23094
||||| ||| || | |||||| | || | || | |||| |||||| || || |||
Sbjct 450885 AATTGGTTGTGTTACT---AAACTCTAAGGTGA-CGTGTCCTTCCCATTCAGGCTCAAGC 450940
Query 23095 GGCGTGACGTTTACGATGATGCCGCAACGCGCATACGTCGATTTGCCGAGGCAGATAACT 23154
||||||||||| |||||||| ||||| ||||| ||||| |||||||| || || ||| |
Sbjct 450941 GGCGTGACGTTGACGATGATACCGCAGCGCGCGTACGTTGATTTGCCAAGACAAATAGTT 451000
Query 23155 AATACGTCACGCGGAATGTTGAAGTGTTCCGGCGTGTTTGCCAGTGCGAAACTGTTCGGC 23214
|||||||| || ||||| ||| | ||| ||| ||| || || || ||| |||
Sbjct 451001 AATACGTCGCGTGGAATACGGAAATACTCCATCGTACGTGCTAGCGCAAACGAGTTAGGC 451060
Query 23215 GGAATGAT 23222
|| || ||
Sbjct 451061 GGGATAAT 451068
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 894595323218240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |