Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_018269.1 Length=31766 Score E Sequences producing significant alignments: (Bits) Value seq6041 95.1 2e-15 >seq6041 Length=422222 Score = 95.1 bits (104), Expect = 2e-15 Identities = 174/254 (69%), Gaps = 6/254 (2%) Strand=Plus/Minus Query 25083 TGTCCAATGATCGCGTTATCACAGCTTAACCGAGGTCTTGAAAACAGACAGGATAAGCGC 25142 ||||| | || || |||| ||||||||||| |||| |||||| | | | |||| ||| Sbjct 190446 TGTCCCGTTATTGCCCTATCTCAGCTTAACCGTAGTCTAGAAAACCGTCCGAATAAACGC 190387 Query 25143 CCAATTAACTCAGACTTGCGCGAGTCTGGCGCGATAGAACAGGATGCTGATCTAATCGCA 25202 || || | || || |||| || ||||| ||||| || |||||||| ||| | || Sbjct 190386 CCTATCATGTCGGATCTGCGAGAATCTGGTGCGATTGAGCAGGATGCCGATTTGATTATG 190327 Query 25203 TTGATATACCGAGACGAAGTGTATAACCCCGACAGCTCTG---ACAAAGGCATTGCCGAG 25259 || || || || || || || ||||| || | ||| | ||||||| | || || Sbjct 190326 TTCATCTATCGTGATGAGGTTTATAA---TGAGAACTCCGACCACAAAGGGGTGGCTGAA 190270 Query 25260 ATTATCATTGGCAAACACAGGAATGGCGAGCTAGGCACAGTGAGAGCGGCATTCATTGGG 25319 || |||||||| ||||| | || ||| | | || || ||| || || || ||| Sbjct 190269 ATCATCATTGGTAAACAGCGTAACGGCCCGATTGGTACCGTGCGACTGGGTTTTGAGGGG 190210 Query 25320 CAGTACACGCGATT 25333 || | |||||| || Sbjct 190209 CAATTCACGCGCTT 190196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 101207412820608