Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_018285.1 Length=40758 Score E Sequences producing significant alignments: (Bits) Value seq219614 86.0 2e-12 >seq219614 Length=1033 Score = 86.0 bits (94), Expect = 2e-12 Identities = 250/382 (65%), Gaps = 11/382 (3%) Strand=Plus/Minus Query 26584 GTTGACACGGGACAGCCAACAGCGCTTATGCCGTGGCAAGAGTTTTTGCTTAGTCAATCT 26643 || || || ||| |||| || ||| ||||| ||||| | ||| | | |||| | Sbjct 448 GTCGATACCGGAGAGCCTACCAAGCTCATGCCTTGGCAGGCTTTTATATTGTCTCAACTT 389 Query 26644 TTTGGCTGGCGCAATGAAACGGGTGGCAAACGCTTTTCACAGGTCATTGTATCTGTTGGT 26703 | |||||||| ||| || ||||| ||||| ||| | | ||||| ||||| Sbjct 388 ATAGGCTGGCGTAATCAAGACGGTGGTAAACGGTTTAGTCGTGCAATTGTTAGTGTTGCA 329 Query 26704 CGTAGTCAAGGGAAAACGTACATTCAGGCTATTTCTATGTGTTTCTCTTACCTTTTCGAA 26763 ||| ||||||| || |||||||| | | || | ||||| ||| || | | ||| Sbjct 328 CGTGGTCAAGGCAAGACGTACATGATGTCAATCATTGCGTGTTACTCATATTTAGTTGAA 269 Query 26764 GGACTTGGACTATCTAACCAAGATTATCTGGTAAGCTCAATCAACTTCAAGCAGACTATG 26823 || ||| | ||||||||||||| | ||| || || || | |||||| || | Sbjct 268 TCGCTGGGATTGTCTAACCAAGATTTCTTAGTAGCATCGATTAATTACAAGCAAACCGGG 209 Query 26824 AAGTTA-ATGGGCTATATTAAGAATATGCTTAAACAGATAATCACCAAAGAACCTTTTAA 26882 || || ||||| || || || ||| | ||| |||| || | || |||||||||| Sbjct 208 AAAATATATGGG-TACATCAAAGGAATGATGAAAAAGATCATTGCTAATGAACCTTTTAG 150 Query 26883 GTCTCTAGCTGAAGAGTTGGACTT--AT-------CTATCCAGTCAGAACAAGTCATTAT 26933 ||| || || | ||| | | ||| || ||| |||||||| || || |||| Sbjct 149 GTCGCTTGCGGCTGAGGTTGGCTTGGATACCCATAGTATTCAGTCAGACCAGATCCTTAT 90 Query 26934 GAGAACGAATAACAACGTTTTA 26955 | | | || || ||||| ||| Sbjct 89 GCGTAACAACAATAACGTGTTA 68 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129890502081920