Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_019400.1 Length=147940 Score E Sequences producing significant alignments: (Bits) Value seq158858 82.4 7e-11 >seq158858 Length=235449 Score = 82.4 bits (90), Expect = 7e-11 Identities = 154/224 (69%), Gaps = 2/224 (1%) Strand=Plus/Plus Query 82565 TATGGGACATCTTTGGTGGGGAAGTTAACTCCAAAGGTTACAAGGTTCTTGATACTCACG 82624 ||||||| ||||||||||| | ||| || ||||| || | | |||||||| Sbjct 214619 TATGGGATATCTTTGGTGGAACAATTACTGAGAAGGGTTATAAACTATTAGATACTCATA 214678 Query 82625 TAGGCCTGATCTACGGTGACTCGATTACCGTTGCTCGTGCAAAAGATATCTTTGA-ACGT 82683 | || ||||| |||||||| ||||| ||| |||||||||| ||| |||| | || Sbjct 214679 TTGGTGCAATCTATGGTGACTCTATTACTCTTGAGCGTGCAAAAGCTATTGTTGAGAAGT 214738 Query 82684 CTGAAAGATAAAGGTTTTGCATCCAGCAATATCGTGTTTGGTGTTGGTTCTTATACCACT 82743 | |||| ||||| ||||| || | || | || || || || || |||||||| Sbjct 214739 -TAGAAGAAAAAGGCTTTGCTTCAACAAACGTTGTTTTCGGCGTGGGATCTTATACTTTC 214797 Query 82744 CAGTACACAACCCGCGATTCACTGGGTATGGCTGTTAAAGCGAC 82787 || || || |||||||| || || | ||| | ||||| || Sbjct 214798 CAATATCAGACTCGCGATTCTCTAGGGTTTGCTATGAAAGCTAC 214841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471699079152000