Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_019405.1
Length=215710
Score E
Sequences producing significant alignments: (Bits) Value
seq78640 136 5e-27
>seq78640
Length=167548
Score = 136 bits (150), Expect = 5e-27
Identities = 276/406 (68%), Gaps = 4/406 (1%)
Strand=Plus/Minus
Query 136644 CTAGCCCTTCACGCAGAGGACTTGCTTGAGGGTGTGGACGATGTCCACGAGGTCCTTCTG 136703
||| ||||| || || | || ||| | ||| || || | || || | ||| | ||
Sbjct 136892 CTATCCCTTAACACAAACCACCTGCCGCAAGGTATGCACCACTTCTACCAAGTCGCTTTG 136833
Query 136704 GGCCTCCATGACCGCGTCGATGTCCTTGTAGGCCATCGGGATTTCGTCGATCACGCCAGC 136763
|| | ||| || | ||||||| |||||| || || || || || || || ||||
Sbjct 136832 CGCGTTCATCACGTCATCGATGTTCTTGTATGCTGCTGGAATCTCATCAATAACCTCAGC 136773
Query 136764 GTCCTTGCGGCACTCCACGCCCTCGGTGGCCTTGATCTGGTCCTCCAGGGTGAAGGTCGC 136823
||| |||||||| || ||||| || || | ||| || || | | || ||
Sbjct 136772 GTCTTTGCGGCATTCTACGCCTTCAGTCTGCGCGATTTGATCGGCTATCGTAAATAATTT 136713
Query 136824 CTTGGCCTGGGTCCGCGACATCGTCCGGCCCGCGCCGTGCGAGCACGAGCAGAACGAGTC 136883
|| |||| || || |||||| || || ||||| |||||||| ||||| || || ||
Sbjct 136712 TTTCGCCTCAGTACGTGACATCACGCGACCTGCGCCATGCGAGCAAGAGCAAAAGGACTC 136653
Query 136884 CGCATTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATGATCCC 136943
| || || || ||||||||||| |||| || || ||||| || || |||||||| ||
Sbjct 136652 TTCGTTACCTTTACCGCGCACGATAAAGGATTTTGCACCCATTGACCCAGGGATGATACC 136593
Query 136944 GAACTGGTCCTTCTGCGCCGAC--ACCGCGCCCTTGCGGGTCACGAAGACCCACTCGTCG 137001
| | | | || | ||| || |||||||| || || || || || || |||| ||
Sbjct 136592 GTATTCG-CCAAC-GCGAGCACGTACCGCGCCTTTACGTGTGACAAATACTTCCTCGCCG 136535
Query 137002 AAGTGGAATTCCTTCTGGACGTAGTTGTGGTGGCAGTTCACCGCTT 137047
|||| ||| || | ||| ||||| || || |||||||||||||
Sbjct 136534 TAGTGCTCTTCTTTATCGACATAGTTATGATGACAGTTCACCGCTT 136489
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 687838677489600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |