Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_019405.1 Length=215710 Score E Sequences producing significant alignments: (Bits) Value seq78640 136 5e-27 >seq78640 Length=167548 Score = 136 bits (150), Expect = 5e-27 Identities = 276/406 (68%), Gaps = 4/406 (1%) Strand=Plus/Minus Query 136644 CTAGCCCTTCACGCAGAGGACTTGCTTGAGGGTGTGGACGATGTCCACGAGGTCCTTCTG 136703 ||| ||||| || || | || ||| | ||| || || | || || | ||| | || Sbjct 136892 CTATCCCTTAACACAAACCACCTGCCGCAAGGTATGCACCACTTCTACCAAGTCGCTTTG 136833 Query 136704 GGCCTCCATGACCGCGTCGATGTCCTTGTAGGCCATCGGGATTTCGTCGATCACGCCAGC 136763 || | ||| || | ||||||| |||||| || || || || || || || |||| Sbjct 136832 CGCGTTCATCACGTCATCGATGTTCTTGTATGCTGCTGGAATCTCATCAATAACCTCAGC 136773 Query 136764 GTCCTTGCGGCACTCCACGCCCTCGGTGGCCTTGATCTGGTCCTCCAGGGTGAAGGTCGC 136823 ||| |||||||| || ||||| || || | ||| || || | | || || Sbjct 136772 GTCTTTGCGGCATTCTACGCCTTCAGTCTGCGCGATTTGATCGGCTATCGTAAATAATTT 136713 Query 136824 CTTGGCCTGGGTCCGCGACATCGTCCGGCCCGCGCCGTGCGAGCACGAGCAGAACGAGTC 136883 || |||| || || |||||| || || ||||| |||||||| ||||| || || || Sbjct 136712 TTTCGCCTCAGTACGTGACATCACGCGACCTGCGCCATGCGAGCAAGAGCAAAAGGACTC 136653 Query 136884 CGCATTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATGATCCC 136943 | || || || ||||||||||| |||| || || ||||| || || |||||||| || Sbjct 136652 TTCGTTACCTTTACCGCGCACGATAAAGGATTTTGCACCCATTGACCCAGGGATGATACC 136593 Query 136944 GAACTGGTCCTTCTGCGCCGAC--ACCGCGCCCTTGCGGGTCACGAAGACCCACTCGTCG 137001 | | | | || | ||| || |||||||| || || || || || || |||| || Sbjct 136592 GTATTCG-CCAAC-GCGAGCACGTACCGCGCCTTTACGTGTGACAAATACTTCCTCGCCG 136535 Query 137002 AAGTGGAATTCCTTCTGGACGTAGTTGTGGTGGCAGTTCACCGCTT 137047 |||| ||| || | ||| ||||| || || ||||||||||||| Sbjct 136534 TAGTGCTCTTCTTTATCGACATAGTTATGATGACAGTTCACCGCTT 136489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 687838677489600