Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_019408.1
Length=223720
Score E
Sequences producing significant alignments: (Bits) Value
seq78640 109 8e-19
>seq78640
Length=167548
Score = 109 bits (120), Expect = 8e-19
Identities = 191/278 (69%), Gaps = 0/278 (0%)
Strand=Plus/Minus
Query 139505 GCGGCACTCGACGCCTTCGGTCGCCTTGATCTGGTCTTCCAGCGTGAAGGCGGCCTTGGC 139564
|||||| || |||||||| ||| | ||| || || | | ||| || || ||
Sbjct 136766 GCGGCATTCTACGCCTTCAGTCTGCGCGATTTGATCGGCTATCGTAAATAATTTTTTCGC 136707
Query 139565 GGCGGTGCGCGACATGGTCCGCCCCGCGCCGTGCGAGCACGAGCAGAACGAGTCGGCGTT 139624
| || || ||||| || || ||||| |||||||| ||||| || || || ||||
Sbjct 136706 CTCAGTACGTGACATCACGCGACCTGCGCCATGCGAGCAAGAGCAAAAGGACTCTTCGTT 136647
Query 139625 GCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATGATGCCGAACTG 139684
|| || ||||||||||| |||| || || ||||| || || |||||||| ||| | |
Sbjct 136646 ACCTTTACCGCGCACGATAAAGGATTTTGCACCCATTGACCCAGGGATGATACCGTATTC 136587
Query 139685 GTCCTTCTGAGCCGACACCGCGCCCTTGCGGGTCACGAAGACCCACTCGTCGAAGTGGAA 139744
| | |||| |||||||| || || || || || || |||| || ||||
Sbjct 136586 GCCAACGCGAGCACGTACCGCGCCTTTACGTGTGACAAATACTTCCTCGCCGTAGTGCTC 136527
Query 139745 CTCCTTCTGGACGTAGTTGTGGTGGCAGTTCACCGCTT 139782
|| || | ||| ||||| || || |||||||||||||
Sbjct 136526 TTCTTTATCGACATAGTTATGATGACAGTTCACCGCTT 136489
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 713385057638400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |