Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_019410.1 Length=221828 Score E Sequences producing significant alignments: (Bits) Value seq78640 114 2e-20 >seq78640 Length=167548 Score = 114 bits (126), Expect = 2e-20 Identities = 211/306 (69%), Gaps = 4/306 (1%) Strand=Plus/Minus Query 137303 ATTTCGTCGATCACGCCGGCGTCCTTGCGGCACTCCACGCCCTCGGTGGCCTTGATCTGG 137362 || || || || || | ||||| |||||||| || ||||| || || | ||| || Sbjct 136792 ATCTCATCAATAACCTCAGCGTCTTTGCGGCATTCTACGCCTTCAGTCTGCGCGATTTGA 136733 Query 137363 TCCTCCAGAGTGAAGGTCGCCTTGGCCTGGGTCCGCGACATCGTCCGGCCCGCGCCGTGC 137422 || | | || || || |||| || || |||||| || || ||||| ||| Sbjct 136732 TCGGCTATCGTAAATAATTTTTTCGCCTCAGTACGTGACATCACGCGACCTGCGCCATGC 136673 Query 137423 GAGCACGAGCAGAACGAGTCCGCATTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCC 137482 ||||| ||||| || || || | || || || ||||||||||| |||| || || ||| Sbjct 136672 GAGCAAGAGCAAAAGGACTCTTCGTTACCTTTACCGCGCACGATAAAGGATTTTGCACCC 136613 Query 137483 ATCGAGCCGGGGATGATCCCGAACTGGTCCTTCTGCGCCGAC--ACCGCGCCCTTGCGGG 137540 || || || |||||||| ||| | | | || | ||| || |||||||| || || | Sbjct 136612 ATTGACCCAGGGATGATACCGTATTCG-CCAAC-GCGAGCACGTACCGCGCCTTTACGTG 136555 Query 137541 TCACGAAGACCCACTCGTCGAAGTGGAATTCCTTCTGGACGTAGTTGTGGTGGCAGTTCA 137600 | || || || |||| || |||| ||| || | ||| ||||| || || ||||||| Sbjct 136554 TGACAAATACTTCCTCGCCGTAGTGCTCTTCTTTATCGACATAGTTATGATGACAGTTCA 136495 Query 137601 CCGCTT 137606 |||||| Sbjct 136494 CCGCTT 136489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 707350881453440