Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_019410.1
Length=221828
Score E
Sequences producing significant alignments: (Bits) Value
seq78640 114 2e-20
>seq78640
Length=167548
Score = 114 bits (126), Expect = 2e-20
Identities = 211/306 (69%), Gaps = 4/306 (1%)
Strand=Plus/Minus
Query 137303 ATTTCGTCGATCACGCCGGCGTCCTTGCGGCACTCCACGCCCTCGGTGGCCTTGATCTGG 137362
|| || || || || | ||||| |||||||| || ||||| || || | ||| ||
Sbjct 136792 ATCTCATCAATAACCTCAGCGTCTTTGCGGCATTCTACGCCTTCAGTCTGCGCGATTTGA 136733
Query 137363 TCCTCCAGAGTGAAGGTCGCCTTGGCCTGGGTCCGCGACATCGTCCGGCCCGCGCCGTGC 137422
|| | | || || || |||| || || |||||| || || ||||| |||
Sbjct 136732 TCGGCTATCGTAAATAATTTTTTCGCCTCAGTACGTGACATCACGCGACCTGCGCCATGC 136673
Query 137423 GAGCACGAGCAGAACGAGTCCGCATTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCC 137482
||||| ||||| || || || | || || || ||||||||||| |||| || || |||
Sbjct 136672 GAGCAAGAGCAAAAGGACTCTTCGTTACCTTTACCGCGCACGATAAAGGATTTTGCACCC 136613
Query 137483 ATCGAGCCGGGGATGATCCCGAACTGGTCCTTCTGCGCCGAC--ACCGCGCCCTTGCGGG 137540
|| || || |||||||| ||| | | | || | ||| || |||||||| || || |
Sbjct 136612 ATTGACCCAGGGATGATACCGTATTCG-CCAAC-GCGAGCACGTACCGCGCCTTTACGTG 136555
Query 137541 TCACGAAGACCCACTCGTCGAAGTGGAATTCCTTCTGGACGTAGTTGTGGTGGCAGTTCA 137600
| || || || |||| || |||| ||| || | ||| ||||| || || |||||||
Sbjct 136554 TGACAAATACTTCCTCGCCGTAGTGCTCTTCTTTATCGACATAGTTATGATGACAGTTCA 136495
Query 137601 CCGCTT 137606
||||||
Sbjct 136494 CCGCTT 136489
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 707350881453440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |