Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_019411.1 Length=219216 Score E Sequences producing significant alignments: (Bits) Value seq78640 118 1e-21 >seq78640 Length=167548 Score = 118 bits (130), Expect = 1e-21 Identities = 201/288 (70%), Gaps = 4/288 (1%) Strand=Plus/Minus Query 136085 GCGTCCTTGCGGCACTCCACGCCCTCGGTGGCCTTGATCTGGTCCTCCAGGGTGAAGGTC 136144 ||||| |||||||| || ||||| || || | ||| || || | | || || Sbjct 136774 GCGTCTTTGCGGCATTCTACGCCTTCAGTCTGCGCGATTTGATCGGCTATCGTAAATAAT 136715 Query 136145 GCCTTGGCCTGGGTCCGCGACATCGTCCGGCCCGCGCCGTGCGAGCACGAGCAGAACGAG 136204 || |||| || || |||||| || || ||||| |||||||| ||||| || || Sbjct 136714 TTTTTCGCCTCAGTACGTGACATCACGCGACCTGCGCCATGCGAGCAAGAGCAAAAGGAC 136655 Query 136205 TCCGCGTTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATGATC 136264 || |||| || || ||||||||||| |||| || || ||||| || || |||||||| Sbjct 136654 TCTTCGTTACCTTTACCGCGCACGATAAAGGATTTTGCACCCATTGACCCAGGGATGATA 136595 Query 136265 CCGAACTGGTCCTTCTGCGCCGAC--ACCGCGCCCTTGCGGGTCACGAAGACCCACTCGT 136322 ||| | | | || | ||| || |||||||| || || || || || || |||| Sbjct 136594 CCGTATTCG-CCAAC-GCGAGCACGTACCGCGCCTTTACGTGTGACAAATACTTCCTCGC 136537 Query 136323 CGAAGTGGAATTCCTTCTGGACGTAGTTGTGGTGGCAGTTCACCGCTT 136370 || |||| ||| || | ||| ||||| || || ||||||||||||| Sbjct 136536 CGTAGTGCTCTTCTTTATCGACATAGTTATGATGACAGTTCACCGCTT 136489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 699020401434880