Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_019486.1 Length=42606 Score E Sequences producing significant alignments: (Bits) Value seq64498 98.7 3e-16 >seq64498 Length=562 Score = 98.7 bits (108), Expect = 3e-16 Identities = 171/249 (69%), Gaps = 11/249 (4%) Strand=Plus/Plus Query 22997 GATGCCGGCTACACGGCAATTCTTTATGGTTACAAGAGTTTCTTGATCAACCAT-TTAGG 23055 ||||| || ||||| |||| ||||| || || |||||||||||||| | ||| ||| Sbjct 261 GATGCTGGTTACACACCAATGCTTTACGGGTATAAGAGTTTCTTGATGAGCCACATTAA- 319 Query 23056 ATCGGCCGGCCTGCAAGAAATTGCTAGTCAGTACCCGCTGTGGCTCGCAGAGTATCCGAA 23115 | || | | |||||||||| || | |||||||| || || ||||| | Sbjct 320 ---------CTTGTCACAGATTGCTAGTCGCTATCAACTGTGGCTTGCCGAATATCCTGA 370 Query 23116 CTACAACGTTACACCGGAGCCAAATTACAACTATTTCCCGTCCTTTATCAACGTTCAGAT 23175 ||||| || || | | ||| ||||| ||| |||||| ||| || || || Sbjct 371 TTACAATGTAACCACCGTGCCGAATTATGGCTACTTCCCGAGTTTTGATAATGTAGGTAT 430 Query 23176 GTTGCAGTTCACGTCAACCTACGTTGCTGGTGGGTTGGACGGCAACGTTGACTTTACTGG 23235 || ||||||||||||||||| ||||| || | || ||||||||||| | ||||| Sbjct 431 CTTCCAGTTCACGTCAACCTATCGCGCTGGCGGTCTTGATGGCAACGTTGATCTAACTGG 490 Query 23236 TATTACAGA 23244 || || || Sbjct 491 CATCACTGA 499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135785336262848