Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_019488.1 Length=34117 Score E Sequences producing significant alignments: (Bits) Value seq213831 82.4 2e-11 >seq213831 Length=112690 Score = 82.4 bits (90), Expect = 2e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 11846 AATACTTTCGCTGCCTTCTCCACATCCCCAAACCCCCCAACATTACTCGGCATAATCCCC 11905 ||||||| || || |||| |||||||||||| || |||| |||| | | ||| Sbjct 50272 AATACTTCTGCAGCTTTCTTAGTATCCCCAAACCCACCTGCATTGTTCGGTACCACTCCC 50213 Query 11906 ATCATCTGCGGCGGAACGCGGTGTGCTGCCATCATGTCATCGCGGCTCACGTTCTTGATG 11965 || | || ||||| || || || |||| | |||||||||| | |||| ||| Sbjct 50212 ATAAGTTGAGGCGGTACTCGATGGCCTGCTAAAGTGTCATCGCGAGATGCAATCTTAATG 50153 Query 11966 TTCAAAAACTCATCCTTAGCTGCAACCTCCGAAAGTGGAATGATTTGGATACCGTCCTTT 12025 || |||||| || || || || ||||| | | |||||| | || | ||| || | Sbjct 50152 TTAGCAAACTCGTCTTTTGCAGCGACCTCTGCCAATGGAATAACTTTCACACCATCAGGT 50093 Query 12026 TTACCGTTGGGCGAGTACATAAACAGGTTGCGGAAGTTGCCCGGCCCTTT 12075 ||||| || |||| ||||| || | ||| ||||| || | |||||| Sbjct 50092 TTACCATTTGGCGTATACATGAATAAGTTCTTAAAGTTACCAGCCCCTTT 50043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108706739205544