Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_019500.1
Length=168066
Score E
Sequences producing significant alignments: (Bits) Value
seq249645 118 1e-21
>seq249645
Length=476466
Score = 118 bits (130), Expect = 1e-21
Identities = 274/409 (67%), Gaps = 8/409 (2%)
Strand=Plus/Plus
Query 94849 TCATTACCAACTCCTATTATGGCTGGAGCACGTACACCAACCCGTCAATTTAGTTCTTGT 94908
||| ||||||| || || ||| | || | ||||| ||| | ||||| ||||| || ||
Sbjct 264553 TCACTACCAACGCCAATCATGTCAGGTGTGCGTACGCCATCGCGTCAGTTTAGCTCGTGC 264612
Query 94909 GTGGTTATTGAAGCAGGCGACTCACTGAAA-TCTATTAACAAAACTGCTAACTCAATAAT 94967
|| | || ||| || || | || | | ||||| ||| || ||| | | || |
Sbjct 264613 GTCTTAATCGAATGTGGTGA-TAGCTTAGACTCTATCAACGCCACCACTAGCGCCATCGT 264671
Query 94968 TGAATACATTTCTAAACGTGCCGGTATTGGTATCAACGTTGGTATGATTCGTGCTGAAGG 95027
|| | || | ||||| ||||| || ||||||| ||| || ||||| ||
Sbjct 264672 ACGCTATGTGTCACAGCGTGCTGGTATCGGCATCAACGCAGGTCGTATCCGTGCCCTTGG 264731
Query 95028 TTCTCGTAT---TGGCATGGGCGAAGTCAAGCATACCGGTGTTATTCCATTCTGGAAACA 95084
| | ||| |||| || |||| ||||||| || |||||| || | |||
Sbjct 264732 TAGCCCTATCCGTGGC---GGTGAAGCACAGCATACTGGCTGTATTCCTTTTTATAAATT 264788
Query 95085 TTTCCAGACTGCTGTTAAATCATGTTCACAAGGTGGAATCCGTGGCGGCGCTGCTACTGC 95144
||||| || || ||||||| || ||||||||||| | |||||||| ||||| ||
Sbjct 264789 GTTCCAAACGGCCGTTAAATGCTGCTCACAAGGTGGCGTACGTGGCGGTGCTGCGACGTT 264848
Query 95145 TTATTATCCTATTTGGCATTTGGAAGTTGAAAATCTGCTCGTTCTGAAAAACAACAAAGG 95204
| || || | |||||||| |||||||| | || || || ||||| ||| ||
Sbjct 264849 GTTCTACCCACTATGGCATTTAGAAGTTGAGTCATTACTGGTACTCAAAAATAACCGCGG 264908
Query 95205 TGTCGATGAGAACCGTATTCGCCATATGGACTACGGAATCCAGATGAAC 95253
||| || || |||||| | || |||||||||||||| | ||| | |||
Sbjct 264909 TGTTGAAGACAACCGTGTCCGTCATATGGACTACGGCGTACAGTTAAAC 264957
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 535887149922880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |