Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_019500.1 Length=168066 Score E Sequences producing significant alignments: (Bits) Value seq249645 118 1e-21 >seq249645 Length=476466 Score = 118 bits (130), Expect = 1e-21 Identities = 274/409 (67%), Gaps = 8/409 (2%) Strand=Plus/Plus Query 94849 TCATTACCAACTCCTATTATGGCTGGAGCACGTACACCAACCCGTCAATTTAGTTCTTGT 94908 ||| ||||||| || || ||| | || | ||||| ||| | ||||| ||||| || || Sbjct 264553 TCACTACCAACGCCAATCATGTCAGGTGTGCGTACGCCATCGCGTCAGTTTAGCTCGTGC 264612 Query 94909 GTGGTTATTGAAGCAGGCGACTCACTGAAA-TCTATTAACAAAACTGCTAACTCAATAAT 94967 || | || ||| || || | || | | ||||| ||| || ||| | | || | Sbjct 264613 GTCTTAATCGAATGTGGTGA-TAGCTTAGACTCTATCAACGCCACCACTAGCGCCATCGT 264671 Query 94968 TGAATACATTTCTAAACGTGCCGGTATTGGTATCAACGTTGGTATGATTCGTGCTGAAGG 95027 || | || | ||||| ||||| || ||||||| ||| || ||||| || Sbjct 264672 ACGCTATGTGTCACAGCGTGCTGGTATCGGCATCAACGCAGGTCGTATCCGTGCCCTTGG 264731 Query 95028 TTCTCGTAT---TGGCATGGGCGAAGTCAAGCATACCGGTGTTATTCCATTCTGGAAACA 95084 | | ||| |||| || |||| ||||||| || |||||| || | ||| Sbjct 264732 TAGCCCTATCCGTGGC---GGTGAAGCACAGCATACTGGCTGTATTCCTTTTTATAAATT 264788 Query 95085 TTTCCAGACTGCTGTTAAATCATGTTCACAAGGTGGAATCCGTGGCGGCGCTGCTACTGC 95144 ||||| || || ||||||| || ||||||||||| | |||||||| ||||| || Sbjct 264789 GTTCCAAACGGCCGTTAAATGCTGCTCACAAGGTGGCGTACGTGGCGGTGCTGCGACGTT 264848 Query 95145 TTATTATCCTATTTGGCATTTGGAAGTTGAAAATCTGCTCGTTCTGAAAAACAACAAAGG 95204 | || || | |||||||| |||||||| | || || || ||||| ||| || Sbjct 264849 GTTCTACCCACTATGGCATTTAGAAGTTGAGTCATTACTGGTACTCAAAAATAACCGCGG 264908 Query 95205 TGTCGATGAGAACCGTATTCGCCATATGGACTACGGAATCCAGATGAAC 95253 ||| || || |||||| | || |||||||||||||| | ||| | ||| Sbjct 264909 TGTTGAAGACAACCGTGTCCGTCATATGGACTACGGCGTACAGTTAAAC 264957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 535887149922880