Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_019501.1 Length=39646 Score E Sequences producing significant alignments: (Bits) Value seq104206 100 7e-17 >seq104206 Length=286 Score = 100 bits (110), Expect = 7e-17 Identities = 129/178 (72%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 4241 TTTGATCCTGCCATTTTCTTGTCCGCAATTTTCCTTCAAGATAAACCTCAGAGCCTTTTC 4300 ||||||||||||||||||| || ||||| |||||||| ||| || | ||| ||||||| Sbjct 58 TTTGATCCTGCCATTTTCTAGTTTGCAATGATCCTTCAATATATACTTGAGAACCTTTTC 117 Query 4301 GCAGATATTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATTACCACGCGGTGCCACTCCG 4360 | |||||||||| |||||||| || | ||| || | || | | ||||| || | Sbjct 118 GAAGATATTCGCCTGCAATTTCAGCTAATTTACCAAATAAAACTATTCTATGCCATTCAG 177 Query 4361 TCTGCTCCTTTTGCTCTCCAGTTTGCTTATCACGCCATTGTTCTGACGTAGCAACTGT 4418 | | || || | |||||||| | ||||| ||| | |||||| || || | ||| Sbjct 178 TTTTTTCTTTATTTTCTCCAGTATTTTTATCTTTCCAATTTTCTGAAGTTGCTAATGT 235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126343394068288