Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_019502.1
Length=44401
Score E
Sequences producing significant alignments: (Bits) Value
seq158858 145 2e-30
seq230105 86.0 2e-12
>seq158858
Length=235449
Score = 145 bits (160), Expect = 2e-30
Identities = 176/240 (73%), Gaps = 0/240 (0%)
Strand=Plus/Plus
Query 37617 AAGTGTCCTTATACAATGAATCCAAAATTTATCACAGTTCACAATACGTATAATGATGCG 37676
|||||||||||| | ||||| || | | || ||||| || || || ||||||||||||
Sbjct 160030 AAGTGTCCTTATTCTATGAAAGCAGAGTACATTACAGTGCATAACACTTATAATGATGCG 160089
Query 37677 CCAGCTGAGAATGAAATTGCTTATATGATACGAAATAATAATGAGGTGTCATTCCACATT 37736
|| ||| |||| || | ||| ||||| |||||| ||| ||||| ||||||||| |
Sbjct 160090 CCTGCTAAGAACGAGGTAAATTACATGATCGGAAATACTAACGAGGTTTCATTCCACTTC 160149
Query 37737 GCAGTAGACGATAAAGAAGCTGTACAAGGCTTACCTTTAGAAAGGAATGCATGGGCTTGT 37796
|||||||| |||| |||| | | ||||| | || | || | ||||| ||| ||||
Sbjct 160150 GCAGTAGATGATATCGAAGTTATTCAAGGTATTCCGGTTGATCGTAATGCTTGGCATTGT 160209
Query 37797 GGAGATGGGAATGGTTCAGGAAACAGAAAGTCGATTAGTGTGGAGATTTGTTATTCTTTA 37856
|| ||||| |||| |||||| |||| || || |||| || || ||||| || |||
Sbjct 160210 GGTGATGGTGGTGGTAACGGAAACCGAAAATCTATCGGTGTTGAAATCTGTTACTCATTA 160269
>seq230105
Length=2871
Score = 86.0 bits (94), Expect = 2e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 1568 AAATGGACCTTATAGGATTTGAACCTATGACCGGACGGTTATGAGCCGTCTGCTCTGACC 1627
||||||||| | |||| | |||||| |||||||||||||||||||||| ||||| |||
Sbjct 2797 AAATGGACCCTGCAGGACTCGAACCTGCGACCGGACGGTTATGAGCCGTCAGCTCTAACC 2856
Query 1628 AACTGAGCTAAAGGT 1642
| ||||||||| |||
Sbjct 2857 AGCTGAGCTAAGGGT 2871
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 141511108640968
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |