Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_019782.1 Length=36566 Score E Sequences producing significant alignments: (Bits) Value seq232480 105 2e-18 >seq232480 Length=511 Score = 105 bits (116), Expect = 2e-18 Identities = 160/225 (71%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 28385 AACGGCATTGATGTTGGAGCAACTAGATTATTCCGCTGGCTGCGTGAGAATGGCTATCTG 28444 |||||| |||| |||| || | | || ||| ||||| |||||| | || ||| || Sbjct 21 AACGGCGTTGACATTGGTGCCAAGCGGTTGTTCGCATGGCTACGTGAGCAAGGATATTTG 80 Query 28445 ATCAATCGGAAGGGCAGTGATTGGAACATGCCAACTCAAAAAGCTATGGACTTAGGGCTG 28504 ||||| |||| || || | ||| ||| || ||| || ||||| |||| || Sbjct 81 ATCAAACGGATTGGTGCCGACTATAACTCGCCGACACAACGCGCGATGGAGCTAGGCTTG 140 Query 28505 TTCAAGATTAAGGAGACAACCATTAATCACCCAGATGGCACTACTTCAAT-CAGCAAGAC 28563 ||| || | || ||||| | || | |||| | || ||| | || | ||| ||||| Sbjct 141 TTCGAGGTCAAAGAGACGGCGATCAGTCACTCGGACGGCCATGTAACAGTTCAG-AAGAC 199 Query 28564 GCCAAAGGTGACCGGCAAAGGTCAGCAATACTTTATCAACAAGTT 28608 |||||||||||||||||||| ||||| || |||||||||||||| Sbjct 200 CCCAAAGGTGACCGGCAAAGGCCAGCAGTATTTTATCAACAAGTT 244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116518670433408