Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_019910.1 Length=159624 Score E Sequences producing significant alignments: (Bits) Value seq249645 129 6e-25 >seq249645 Length=476466 Score = 129 bits (142), Expect = 6e-25 Identities = 277/408 (68%), Gaps = 12/408 (3%) Strand=Plus/Plus Query 73413 CTTCCCACCCCGATTATGGCAGGTGTTCGTACTCCTACCCGTCAGTTCAGTTCCTGTGTC 73472 || || || || || ||| ||||||| ||||| || | |||||||| || || || ||| Sbjct 264556 CTACCAACGCCAATCATGTCAGGTGTGCGTACGCCATCGCGTCAGTTTAGCTCGTGCGTC 264615 Query 73473 CTGATCAAAACTGGTGACACCCTGGACTCTATCAACGCAACGGCCAAGACCATCGTTGAC 73532 | ||| || |||||| | | | |||||||||||||| || | | ||||||| | Sbjct 264616 TTAATCGAATGTGGTGATAGCTTAGACTCTATCAACGCCACCACTAGCGCCATCGTACGC 264675 Query 73533 TATGTGTCCAAACGCGCAGGTATCGGCTTCGACGTCGGGGCTATCCGTGGGATTGGCAGT 73592 |||||||| | || || ||||||||| || ||| || |||||||| |||| || Sbjct 264676 TATGTGTCACAGCGTGCTGGTATCGGCATCAACGCAGGTCGTATCCGTGCCCTTGGTAGC 264735 Query 73593 CCTATTCGCGGCGGAGAGATGGTTCACACAGGC-CTGATCCCATTCATCAAGTATCTCAC 73651 ||||| || ||||| || || || ||| | ||| || || || | | || Sbjct 264736 CCTATCCGTGGCGGTGAAGCACAGCATACTGGCTGTATTCCTTTTTATAAATTGTTCCAA 264795 Query 73652 TGGGGCGCTCAAGTCGTGCTCCCAGGGCGGCATTCGTGGTGGTGCGGCAACAGCGTACAT 73711 || || | || | ||||| || || ||| | ||||| ||||| || || || | Sbjct 264796 ACGGCCG-TTAAATGCTGCTCACAAGGTGGCGTACGTGGCGGTGCTGCGACGTTGTTCTA 264854 Query 73712 CCCTCTGTGGCA-TTACCAGTTCGATGACGTCGTT----GTACTGAAGAATAACCGTGGT 73766 ||| || ||||| ||| |||| || ||| || ||||| || |||||||| ||| Sbjct 264855 CCCACTATGGCATTTAGAAGTT-GA----GTCATTACTGGTACTCAAAAATAACCGCGGT 264909 Query 73767 ACTGAAGAGAACCGCGAACGCCGTATCGACTATGGTATTCAGATCAAC 73814 |||||| ||||| | || | ||| ||||| || | ||| | ||| Sbjct 264910 GTTGAAGACAACCGTGTCCGTCATATGGACTACGGCGTACAGTTAAAC 264957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 508962987473920