Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_019925.1
Length=152427
Score E
Sequences producing significant alignments: (Bits) Value
seq249645 120 3e-22
>seq249645
Length=476466
Score = 120 bits (132), Expect = 3e-22
Identities = 275/408 (67%), Gaps = 12/408 (3%)
Strand=Plus/Minus
Query 51400 GTTGATCTGAATACCGTAGTCGATGCGACGTTCGCGGTTCTCTTCTGTTCCACGGTTGTT 51459
||| | ||| | |||||||| || |||| | ||||| ||||| || ||||| ||
Sbjct 264957 GTTTAACTGTACGCCGTAGTCCATATGACGGACACGGTTGTCTTCAACACCGCGGTTATT 264898
Query 51460 CTTCAGGAC----AACGACGTCATCGAACTGGTAG-TGCCACAGGGGGATGTACCCTGTC 51514
|| || || || ||| || |||| || ||||| || ||| | || |||
Sbjct 264897 TTTGAGTACCAGTAATGAC----TC-AACTTCTAAATGCCATAGTGGGTAGAACAACGTC 264843
Query 51515 GCTGCACCGCCGCGAATGCCGCCCTGAGAGCACGACTTGAGCGCCCCAGTGAGATACTTG 51574
|| |||||||| || | ||| || || ||||| | || | || || || | | ||
Sbjct 264842 GCAGCACCGCCACGTACGCCACCTTGTGAGCAGCATTTAA-CGGCCGTTTGGAACAATTT 264784
Query 51575 ATGAACGGGATCAG-GCCTGTGTGAACCATCTCTCCGCCGCGAATAGGACTACCAATACC 51633
|| || ||| | ||| || || || ||||| || ||||| ||||||| |
Sbjct 264783 ATAAAAAGGAATACAGCCAGTATGCTGTGCTTCACCGCCACGGATAGGGCTACCAAGGGC 264724
Query 51634 ACGGATTGCCCCGAAGTCGAAACCGATACCAGCGCGTTTTGACACATAGTCAACGATGGT 51693
|||||| || || || ||||||||||| || | |||||||||| |||||||
Sbjct 264723 ACGGATACGACCTGCGTTGATGCCGATACCAGCACGCTGTGACACATAGCGTACGATGGC 264664
Query 51694 CTTGGCCGTTGCGTTGATAGAGTCCAGGGTGTCACCAGTCTTGATCAACACACATGAGCT 51753
| | || |||||||||||||| | | | |||||| | ||| || || || |||||
Sbjct 264663 GCTAGTGGTGGCGTTGATAGAGTCTAAGCTATCACCACATTCGATTAAGACGCACGAGCT 264604
Query 51754 GAACTGACGGGTAGGAGTACGAACACCGGCCATGATCGGGGTTGGAAG 51801
|||||||| | || ||||| ||||| | |||||| || ||||| ||
Sbjct 264603 AAACTGACGCGATGGCGTACGCACACCTGACATGATTGGCGTTGGTAG 264556
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 486009517070560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |