Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_020081.2 Length=149844 Score E Sequences producing significant alignments: (Bits) Value seq149378 87.8 2e-12 >seq149378 Length=35185 Score = 87.8 bits (96), Expect = 2e-12 Identities = 131/186 (70%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 117207 CCTGTTGCTCCTCCTCTATTCGGGAAGTTAATTTCTGAGGGGTCAATAGAATAAATGGAA 117266 || || ||||| || | ||| || |||||||||||| || | ||| |||| || | Sbjct 23288 CCAGTAGCTCCCCCACGATTAGGAAAGTTAATTTCTTCTGGCTGAATTTGGTAAACGGCA 23229 Query 117267 CAGATAACGTTGATCAAGTAGTTTAGCCACTTCTCGAACTCCATATCTTTCGACGACTGT 117326 ||||| | || | |||||| | |||| || || |||||||| || | |||| Sbjct 23228 GCAATAACATAAATTAGGTAGTTCAAAAACTTTTCAAATTCCATATCCTTACTAGTCTGT 23169 Query 117327 GTCATGTTGACAAACTTAACGTCTTCTGCTGTAATAACGGGTATCTTCCAAGCTCCGTTT 117386 |||||||| ||||||||| | |||| ||| ||| | || | ||||||||| || || Sbjct 23168 GTCATGTTAACAAACTTAGCATCTTGACCTGAAATCATTGGAACCTTCCAAGCGCCATTC 23109 Query 117387 ATTCCA 117392 || ||| Sbjct 23108 ATACCA 23103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477771527067520