Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_020201.1
Length=142349
Score E
Sequences producing significant alignments: (Bits) Value
seq249645 134 1e-26
>seq249645
Length=476466
Score = 134 bits (148), Expect = 1e-26
Identities = 211/302 (70%), Gaps = 0/302 (0%)
Strand=Plus/Minus
Query 76454 CTCACTGAACGCCCAAGTCTCTACCCATGTTTCCAGGGTGGTGTCGGATACGATCGGCAG 76513
|||| ||||| ||| ||||| | ||| || || || | | || || | |||||
Sbjct 268532 CTCAGAGAACGACCATGTCTCAATCCACGTCTCAAGCTCAGGGATAGACACTAGCGGCAA 268473
Query 76514 AAGAACTGCGTTCGGCCCACGGCCCTGTACAGAATCCAGGAGGATCTGGTACTTCAGGTT 76573
|| || |||| || | ||| || || | ||| || || ||| |||| ||||| |||||
Sbjct 268472 TAGTACCACGTTTGGACTACGACCTTGGATAGAGTCGAGTAGGGTCTGATACTTAAGGTT 268413
Query 76574 GCTGATGAAGATGTGCTTCTCGTGATCCGGCAGGTTCATGTAGTCGATTCGGTCACGGGT 76633
||| | || ||||||| |||||| | ||||| | | || || ||||| || |
Sbjct 268412 GCTCAAAAATATGTGCTGCTCGTGGGATGATAGGTTGCTAAAATCCATACGGTCGCGTGA 268353
Query 76634 CACGTTAACTTCTTCAGGTCGCCAGAAGAACGCCAGTTGCTTTTCAATCAGCTTCTCGAA 76693
||| | ||||||||| || ||||| ||||||| || ||||||||||||| | ||| ||
Sbjct 268352 CACATCAACTTCTTCTGGACGCCAAAAGAACGACAACTGCTTTTCAATCAATTGCTCAAA 268293
Query 76694 CTTCGCATGTTTCTGCTGGTCGTAGCGAGAAACGTTCGGTGTCTCTCCGAGGAACATCGG 76753
| | ||||| || ||||| ||||| | ||||| | || || | |||||||||
Sbjct 268292 GATTGGGTGTTTTTGTTGGTCATAGCGCGCTACGTTGACGGGCTGACCAAAGAACATCGG 268233
Query 76754 CT 76755
||
Sbjct 268232 CT 268231
Score = 86.0 bits (94), Expect = 6e-12
Identities = 149/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 77776 CACGAGGGGGCTCGAATCCGTTGGTGGAGTTGGTGATTTGGCTGGATGTCTCGCAAGGCA 77835
|||| || ||||||| |||||||| | |||| ||| || || || || || | ||||
Sbjct 265855 CACGTGGTGGCTCGATACCGTTGGTCGCATTGGCGATCTGACTTGAGGTTTCAGACGGCA 265796
Query 77836 TCATCGTGGACAGCGTGGAGTTACGCAGGCCATGAATGGCGATGTCGATACGCAGCTTTT 77895
||| | || || || ||||| ||||| || || | ||| ||| ||| ||| |||
Sbjct 265795 TCAAGGCGGTTAGGGTAGAGTTGCGCAGACCGTGCTCAGTGATCTCGCCACGTAGCGTTT 265736
Query 77896 CCCAATCCATCTTCAGTTCCGCAGTGTGGAGTCCATCCACTTCTTTCTTGTAACGGTCGA 77955
||||||| | | ||| | | | || ||||| ||||| ||||| || |
Sbjct 265735 CCCAATCTAAATGTAGTGGCTCTTGGCAGATCTTATCCAAGTCTTTTTTGTACGTATCAA 265676
Query 77956 TCGGTAGAATACCCTGAGAGTAGGTGGTCTCGTGGAA 77992
|||| | ||||| || |||||||||||||| | |||
Sbjct 265675 TCGGCAAGATACCTTGTGAGTAGGTGGTCTCATTGAA 265639
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 453867642021920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |