Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_020478.1 Length=49259 Score E Sequences producing significant alignments: (Bits) Value seq78791 499 9e-137 seq222169 136 1e-27 >seq78791 Length=51567 Score = 499 bits (552), Expect = 9e-137 Identities = 1118/1658 (67%), Gaps = 72/1658 (4%) Strand=Plus/Plus Query 3173 ATGTCAACAGTTTTTCTaaaaaaaGTTA--AGGAGTTGTTAAAATGCGAGACATGACAGC 3230 ||||||| ||||||| |||| | ||| ||||| ||||| | || |||| Sbjct 19660 ATGTCAATAGTTTTTTTAAATTTATTTATGAGGAGGCAACCAAATGGAATACT---CAGC 19716 Query 3231 AGAAGAAATaaaaaaaaTGCGTAACGTTTTGCGTGATCCAGTAGGCTTTACCGAGAAGAC 3290 ||| || | || || ||||| |||||| || | || || | || || || |||| ||| Sbjct 19717 AGAGCAACTCAAGAAGATGCGGAACGTTATGAGAGACCCTATCGGATTCACTGAGACGAC 19776 Query 3291 AGGAACCGTAAAGGGTAAACCCTTCAAGTTTAAGCACCGAGAGCACTTGTATGATGTATA 3350 || || || ||||||||| | |||||||| | ||||||| ||||| | || || || Sbjct 19777 TGGGACTGTCAAGGGTAAAGCTTTCAAGTTCGACCACCGAGGTCACTTACACGAGGTCTA 19836 Query 3351 CCGAGACAAACACCCTCGTATAGTTATCGTAGCAGGTCGTCAGGTTGAGAAGTCCGAGAC 3410 | ||||| |||||| | | || || ||||| || || || || |||||||| ||||| Sbjct 19837 CAGAGACCCTCACCCTAGAGTTGTCATAGTAGCTGGACGACAAGTAGAGAAGTCTGAGAC 19896 Query 3411 AGTAAACCGTCTCATTCTCTTTCATGGATACACGAGACCGCACACAACCATTACATATAC 3470 || |||||| | | |||| || |||||| | || | || || || ||||| || || Sbjct 19897 GGTTAACCGTTTGCTACTCTACCACGGATACCAGCGAGCCCATACTACGATTACCTACAC 19956 Query 3471 GGCACCTCGTAACGAACAAACAACCCGTTTTGTCAACGACCGTTTCAGAAAGTCCATT-- 3528 || || ||||| || |||||||| ||||| ||||||||||| || |||||||| || Sbjct 19957 AGCTCCACGTAATGAGCAAACAACACGTTTCGTCAACGACCGCTTTAGAAAGTCTATACA 20016 Query 3529 GCAACTTCAAATGGAGCAATT-CTTGAAGGAGATGTCAACAAAAACCGAGATGCAAAGAC 3587 | || || || | || || || ||| || || |||| || || || || ||||| Sbjct 20017 GGAA--TCTAA-GCAGGGCTTACTCGAAAGAATGGTAGACAAGAAGCGTGACGCTAAGAC 20073 Query 3588 AGCTATCGGGCTAAAGAACAACACAACGTACTATTTTGGCTCCTCATGGGCTGATGGGGA 3647 |||||| || |||| ||| ||| ||||||||||||||| | |||||||| || || Sbjct 20074 AGCTATTGGACTAATTAACTCTACAGTGTACTATTTTGGCTCAGCGTGGGCTGACGGAGA 20133 Query 3648 TGCTCTTCGAGGTATCTCAGGGGATATGGTGTTCTTTGACGAGGTTCAGGACATCGGGCA 3707 |||||| || ||||| | || ||||| || | || || ||||| ||||| || || Sbjct 20134 TGCTCTCCGTGGTATTGCTGGCGATATAGTTATGTTCGATGAGGTACAGGATATTACACA 20193 Query 3708 GACAGCCATCGAGTCGATTGAGAAGAGTGTATCCCACTCAGAGATACAGGATGCGGTAAC 3767 |||||| |||||||| ||||||||| ||| || || ||||| | || | || || Sbjct 20194 GACAGCTATCGAGTCAATTGAGAAGTCTGTCTCACATAGCGAGATTAAAGACCCTGTTAC 20253 Query 3768 CGAGATAAACGGACGTTGCTTCTACACGGGAACACCCAAACAGAAGGGCTCCTATTACGA 3827 ||| | || || || |||||||| || || || |||||||| ||||| || ||||| Sbjct 20254 TGAGCTGAATGGTAAGTGTTTCTACACAGGTACGCCAAAACAGAAAGGCTCTTACTACGA 20313 Query 3828 CAAAGTCCTCTGGGGTAACTCTGATCAGAAGAAATGGTCAGT---ATGCTGTGAGAAATG 3884 | ||| |||||||| | ||| | |||||||||||| || |||| | || Sbjct 20314 CCGAGTACTCTGGGGACAATCTAACCAGAAGAAATGGAGCGTTGAGTGCTCT------TG 20367 Query 3885 CGGTCATGATCAGTTCTTGTCGATGAAAAACGTCATGGTTCAAAACGAAAAAGAAGAAAA 3944 ||||| | || || || | ||||||||||| |||||| || || | || | Sbjct 20368 TGGTCACCACCAATTTATGACTATGAAAAACGTAATGGTTATGAATGAGGGAACTGACGA 20427 Query 3945 CGAGCGGAGATACTTTGGGTGCCTTGAGTGTGAAGCAGAATTGAACCGTGAGAATGGACA 4004 ||||| | |||||||| || || ||||||| | || || |||||||| ||| Sbjct 20428 GGAGCGTCGCTACTTTGGCTGTCTGGAGTGTGGCGAGGAGTTAGACCGTGAGCGTGGCTC 20487 Query 4005 ATGGGTCAAAACACGACCAAACAACAAGCGTTACAGCGGGTACCTGTTCAACCAACTCAA 4064 ||||| ||| ||| | |||||| ||||| || ||| |||||||||| || || Sbjct 20488 GTGGGTAGTAACGAAACCTCATAACAAGATGTACAGTGGCTACTTGTTCAACCAGCTTAA 20547 Query 4065 TATGCCATGGATCAGCGCCAACCAAATCTGGCACGACTATAACAACATGGATGACATGAC 4124 |||| | ||||| || || ||||||||||||| |||| || | ||||| |||||| Sbjct 20548 TATGACTTGGATTAGTGCAAACCAAATCTGGCGTGACTTTACGACTATGGACTCCATGAC 20607 Query 4125 CTTCCACAACGAGGTACTAGGGGAATTCTACTCGGGGGATGAACAGCCACTTTCTTATGA 4184 ||||||||||||||||| || || || || || ||||| || ||| | | ||| Sbjct 20608 ATTCCACAACGAGGTACTGGGAGAGTTTTATAGCGGAGATGAGCAACCAGTAACCCTTGA 20667 Query 4185 GGACGTACTGGCATGTACAGATAAGA-GCTTGTCCTTACAAAGTAAATGTGATATCCCAA 4243 ||| ||||| || ||| || | |||| |||| | || | ||| | |||| Sbjct 20668 GGATGTACTAGCTTGTTGTGACCGCACGCTT-AGCTTAAAGAGACGCTCTGACACGCCAA 20726 Query 4244 CCGTCATGGGTATTGACTATGGCTCTGGTGGGCAATCCAAGACGATCATTACAATTGGTC 4303 | || ||||| ||||||||||| |||| | | || || || || ||||| |||||| Sbjct 20727 CTGTAATGGGGATTGACTATGGTAGTGGTAGTAAGTCTAAAACAATTATTACTATTGGT- 20785 Query 4304 ACGAAACAATGCACAAAGGCAAGAAAAAGCTCCTAATCGTCCACATGGAGAGCGCTCCTA 4363 || || | || ||||| | || | |||||| |||||| ||| Sbjct 20786 -----------CATAATTGGGAGGGTAAGCTTGTGATTGACCACATTGAGAGC-TGGCTA 20833 Query 4364 ACATGGATACAGACGA-GCGTATTGCTTATAT---CAACTCTTTG-----------AAGC 4408 || |||| |||| | | | | | || |||||| ||| |||| Sbjct 20834 CCA--GATAAAGACAACCCAGACAACCAACATGACCAACTCATTGAGTATCTGTGCAAGC 20891 Query 4409 -ACAA-----ATACAATGTCCAGAAGATCAATGGTGATATTGGGTATGGTCAATATGAG- 4461 |||| ||||| || |||| || ||||| || || || ||| || ||| Sbjct 20892 TACAAGCCATCTACAACGTTGAGAAAATAGTCGGTGACATCGGTTACGGTTCTTACGAGT 20951 Query 4462 -GGGGAATCCTTCTATGCCATGTACGGAAGAGAAGCCATCTCTACAAGATACGTAACCTA 4520 ||| | | |||| ||| || || || | || ||||| |||||||| || || Sbjct 20952 CTCAGAAGC--TATATGGCATCTATGGTAGGAACGCTATCTCATGTAGATACGTTACGTA 21009 Query 4521 CCAGACTAACCCTAAAAAGCGTGA-AATAAAAGA-TAAATTCGTC----CTACAAGTAGA 4574 || | |||| || ||||| ||||| || | ||| || ||||| ||||| Sbjct 21010 TGCGAATGACCCACGGAAACGTGAGTATAAAGGATTCAATAACTCAACTCTACAGGTAGA 21069 Query 4575 CAGAACGTTCTCAATGGATTCACTTA-TCATGGCTTTCAAGCGTGGAGAGATCGTCATCC 4633 | | || |||||||||||| |||| | || || || || | | || || || | Sbjct 21070 CCGTACTTTCTCAATGGATAAGCTTATTGATATGTTCCATAAGTCTA-ACATAGTTATTC 21128 Query 4634 CTTACAGTGACCCAGATAAGGTAGAAATGTTCTTTGACCACTATACAGCCATTGAGGCGG 4693 | |||| | ||||| |||| || |||||||||||||| ||||| ||||| | Sbjct 21129 CGTACAAGCAACCAGAGGAGGTTGAGTACTTCTTTGACCACTACACAGCTATTGAAATGA 21188 Query 4694 TCTTCTCAGAGTC-AACTCAAGGTACTGGACGCAAGAGATACGACCACAGAACGCCAGAC 4752 | ||| | ||||| ||| | || || |||| || |||||| | || |||||| Sbjct 21189 TATTCACCGAGTCGAACAC-TTCCACAGGTGTTAAGAAGTATGACCACCGTACTCCAGAC 21247 Query 4753 GATGCATTCCACTCCCTGAACTATGTCCGAGAAGGTAT 4790 |||||||||||| | ||||||| || |||| ||||| Sbjct 21248 GATGCATTCCACAGCTTGAACTACGTTAGAGAGGGTAT 21285 Score = 363 bits (402), Expect = 5e-96 Identities = 723/1060 (68%), Gaps = 13/1060 (1%) Strand=Plus/Plus Query 5107 GAGCGACCAGATCAAGAAGACTTTAACCCTACAGACTTTTCCCTTGAAGTATATGAAAAG 5166 ||||| ||||| || |||||||||||| |||||||| ||||||||||| || || Sbjct 21605 GAGCGTCCAGACCAGTTAGACTTTAACCCCTCAGACTTTGACCTTGAAGTATGGGACAAA 21664 Query 5167 ATGCTTACAGATGGTCAAGTTAAGTCAGCCCTTGACATGATCAAGCTATCAGCAACCGCA 5226 ||| | || || || || ||||| | | | | || ||||| |||||||| | || Sbjct 21665 ATGATGACCGACGGACAGGTTAAAGCTGGCTTAGATATGATTAAGCTATCTTGCTCGGCT 21724 Query 5227 AAAGGCTTCACCGTAACAGGTGACGACGATGAGTCTAAAAAGTATGCCGACTTCATCAAT 5286 |||||||| | |||||||||||||| ||| ||||||||||||| || || || Sbjct 21725 CGTGGCTTCACTATTACAGGTGACGACGAGGAGACTAAAAAGTATGCTGAGTTTATTTCA 21784 Query 5287 GAGAACTTTGAAATGATCAGGGGCAACATGGAAGATGTACTCAAAGAGATCATGACAGCC 5346 | |||||||| ||| | ||||||||||| || ||| | ||||| | |||| Sbjct 21785 TATAACTTTGAGTCGATTCGTGGCAACATGGAGGACGTAATTGGTGAGATGCTTTCAGCT 21844 Query 5347 CTTGAGTATGGCTATAGCTGTACAGAGAAGGTCTTCGAGTA---TAAAAATGGCAAGATC 5403 || ||||||||||| ||| || ||||| || ||||| |||| || | ||||| Sbjct 21845 CTAGAGTATGGCTACTCAGTTACGGAAAAGGTATTTGAGTACGATAAAGATAGAAAGATA 21904 Query 5404 ATGCTCAAGAAGCTGAAAACACTTGACCCTTATAGTGTGGCAGGCAAGACGGATCGTTTT 5463 | | |||||||| ||||| || ||||| | | | | |||| || ||| Sbjct 21905 GTTTTAAAGAAGCTTAAAACGCTAGACCCACACAAGTTAACTTTAAAGATTGACAAGTTT 21964 Query 5464 GGCGACCTCGTGTATGTCAAACAACGCATCGGA-AGCAAAACAATCAAAATACCTGCTGA 5522 || || | |||||||| || || || |||| | | | | | |||| ||| Sbjct 21965 GGTGATTTAGTGTATGTACGTCAGTCGATTGGTCAGCACGAGATTGATA-TACCAGCTAG 22023 Query 5523 TAAAGTCTTATGGTATGCC--CATCAAAAGCGCTTTGGTAATATCTACGGTCAATCCAGA 5580 ||| || || ||| | ||| | ||||||||||| || | |||||||| || Sbjct 22024 TAATGTG--ATTCTATACAGTCATGACAAGCGCTTTGGCAACCTTTACGGTCAGTCAGCT 22081 Query 5581 CTAAGAACGGTGTACAAGCACTGGTTCATCAAAGATAAAATGTACAGATTCGCCAACATT 5640 || ||||| || |||||||||||| |||| || ||||| ||||||||||||| |||||| Sbjct 22082 CTGAGAACAGTCTACAAGCACTGGCTCATTAAGGATAAGCTGTACAGATTCGCTAACATT 22141 Query 5641 GCTTATGAGCGCTATGGTACGCCCCTTTTAGTTGGATCAGTAGAGGACAAAAATGATGTA 5700 || || ||||| ||||| || || || ||||| || |||| ||||| || ||||| Sbjct 22142 GCCTACGAGCGTTATGGAACACCGCTATTAGTCGGTAAAGTACAGGACGCTAACGATGTT 22201 Query 5701 CCTGAGATCACACGCCTTTTGAGAAACATCAATGGTATGACTGGACTAGGACTATCTGGC 5760 | || | | || |||||| || || | |||||| || | ||||| Sbjct 22202 GACAAAATGAATAGTCTATTGAGACGGATTAACAGCATGACTTCTCTGTCCATCTCTGGT 22261 Query 5761 GGAGCTGATGTAAAAGCTATTCAGACAACTAACGCAGACTTCATTGGATACATTGAGCAC 5820 || || || ||||||||||| | | |||||| ||||||||||| |||||||||||| Sbjct 22262 CAAGACGACGTGAAAGCTATTCAAATGAGTAACGCTGACTTCATTGGTTACATTGAGCAC 22321 Query 5821 CACGACCGCAAGATCATGGAATCACTCCTTGTACCGCCATCCCTCCTAGGGTTGTCACGT 5880 || ||||||||||| ||||| | | || || || || | || || | || Sbjct 22322 CATGACCGCAAGATTATGGAGGCTATGCTAGTTCCACCTATGTTGCTTGGTATCGGTCGA 22381 Query 5881 GGTCAATCTGGCTCTTATGCACTGTCTTCAAACCAATTTGACATCTTTATGATCCACCTT 5940 || || |||||||| || || || || ||||| |||||| | || |||| || || Sbjct 22382 GGACAGTCTGGCTCATACGCTCTTACTAATAACCAGTTTGACGTATTCATGA-GCAGATT 22440 Query 5941 GAAAGCATT-CAGCGTGATATCAAATCACTTATCGAGGAAGAAATAATCAGACCCTTGGT 5999 |||| || |||||||| | || | ||||| ||||| ||| | || ||||| | | Sbjct 22441 AGAAGCGTTACAGCGTGACTTGAAGGCGCTTATTGAGGAGGAAGTCATTAGACCACTAAT 22500 Query 6000 TGACCTGAATTTCCCTAACGTTACAAGGTACCCTGCGTTCACATTCAAGCCTTTAGCAGA 6059 ||| | || || |||||||||| | |||||| | ||| |||| || | || | Sbjct 22501 CGACTTAAACTTTCCTAACGTTAAGAAATACCCTTCATTCCAATTCCGTCCACTTGC-TA 22559 Query 6060 TCGA-GACATCGACAAGCTGTCAAGTGTATTTGAGAAGTTGATCAACGCTTCTGTCATTG 6118 ||| ||||| | ||||| | | ||||| | || |||| | ||| || |||| Sbjct 22560 ACGAGGACATTCAAAAGCTTGCTAACGTATTCATGCAGATGATTACAGCTGGAGTTATTG 22619 Query 6119 CCCCTGAGGAAGACTGGTTACGTGAAGAGCTTGGCTTCCC 6158 || ||||| ||||||||||| || ||||||||||| Sbjct 22620 ATGCTAGTGAAGATTGGTTACGTGAGGAACTTGGCTTCCC 22659 Score = 302 bits (334), Expect = 1e-77 Identities = 412/566 (73%), Gaps = 12/566 (2%) Strand=Plus/Plus Query 30222 GGAATGCGTGACTTGTGTAAACAAGTTCAACCTACTGAGTTTAAACACATTGTAGCGATC 30281 ||||||| | || |||||| || || |||||| ||||| | || | |||||||| Sbjct 200 GGAATGCAACAATTATGTAAAGCTGTACAGCCTACTAAGTTTGAGCATCTCGTAGCGATT 259 Query 30282 AACGCTTTGTACCGTCCACCAGCTTTAGCCTCTGGAGATACTTGGAGATATGCCAATATC 30341 | || |||||| | |||||||| ||||| |||||| ||||||||||| || | || Sbjct 260 ACAGCATTGTACAGACCACCAGCATTAGCTAGTGGAGACACTTGGAGATACGCTGACATT 319 Query 30342 AAGAATGGCAGAGAGGAAGAGCGATACAGCCACCCAGAGGAAAAACAAATCACAGGTGAG 30401 |||||||| | || || |||| |||||||||||||| || || | || ||||||||| Sbjct 320 AAGAATGGTAAAGCTGAGGAGCATTACAGCCACCCAGACGAGAAGCGCATAACAGGTGAG 379 Query 30402 ACTTACGGGGTTATCACTTATCAGGAGCACGTTATGCAACTTGTACA-TCATTTTGCTGG 30460 || | || || || || | || |||||||||||| | ||||||| ||| |||||||| Sbjct 380 ACCTTTGGAGTCATTACCTTCCAAGAGCACGTTATGGAGATTGTACACTCA-TTTGCTGG 438 Query 30461 TTGGGATTACGGACGAGGTGACAAGCTCCGTAAGATGAGTGCAGAACAACTTGAAGAACT 30520 ||||||||| |||||||| ||||| || |||||| ||||| || ||||||||| || Sbjct 439 TTGGGATTATGGACGAGGCGACAAACTACGTAAGGCTAGTGCTGAGGAACTTGAAG--CT 496 Query 30521 AAGAG--CAGAATTTATCTGGGACTCTGTTTCGAACTTCGATTATGATCAAAACAACGTT 30578 | | | |||| ||||| ||| || ||| | | | || |||||| Sbjct 497 ATGCGCTCAGAGTTTATTGAGGATGCTTGCAAGAAGTACTCACACGA--CGCACAACGAA 554 Query 30579 GAGTTTATAG--CTCAGATGGGTGACTTATGGGATCGTATTGTCCAGTACATGGGTTACG 30636 || || | | ||||||||| ||| | ||| ||||||||| |||||||||||||||| Sbjct 555 CAGCTTTTCGCTCTCAGATGGATGAGCTTTGGAGTCGTATTGTACAGTACATGGGTTACG 614 Query 30637 GATTCAATAAGTCCCACGGAGTAGCTTACTCTATGTTGACATACCTCACGGTATTTCTGG 30696 | ||||||||||||||||||||||||||| ||||| | || || | || | || || | Sbjct 615 GTTTCAATAAGTCCCACGGAGTAGCTTACACTATGATTACTTATATGACAGCATGGCTAG 674 Query 30697 AGCATTACTATCCAGAGCAC-TACATGTCTGCGATTCTAACAAGTAAAATGTCTGACCAA 30755 |||| ||| ||||||||| | || | || | | | | | ||||||||| ||| || Sbjct 675 AGCACCACTTCCCAGAGCACTTCCAAGCCT-CACTAATGAGTACTAAAATGTCAGACAAA 733 Query 30756 GAAACTCTGGCTAAAGTGTTCCAAGA 30781 || | | ||| || | |||||||| Sbjct 734 GACAAAATAGCTCAAATATTCCAAGA 759 Score = 239 bits (264), Expect = 1e-58 Identities = 444/645 (69%), Gaps = 10/645 (2%) Strand=Plus/Plus Query 26990 AGAAGAGGCAAGAAAGTTCATTGAAAGAATGATGAGAAAGCAAGACAAAAAGGAG---CT 27046 ||| ||||| ||||||| || ||| ||||| || ||| | ||||| || | || Sbjct 43900 AGACGAGGCTCGAAAGTTTATCGAACAAATGAGGA---AGCGACACAAACAGCACACTCT 43956 Query 27047 CCCTACGTTTAAGATGCCAAGAATGAAACTAGCAAAGGTTAGCTCCTACAGAGGGTACTC 27106 || | || ||||| | || ||||| | || || || | | ||| ||||| ||||| Sbjct 43957 ACCAGCTTTCAAGATTCAAAATATGAAGTTTGCTAAAGTGAACGACTATAGAGGTTACTC 44016 Query 27107 AGAAGAGACTATCAAACATTGGAAGTT-CTTCCTTGCTAAAGATGGAGAGCTACAAGACA 27165 | |||| | | | ||||| | | |||| | ||| || || || |||||| Sbjct 44017 ACAAGAAGCGCTTGACTGGTGGAAAATACGATATTGC-ACAGAAGGCGAACTCAAAGACA 44075 Query 27166 GAATCATTATTCCCTTCGAGGATGTAGATAACCGCCTTGTTGGTATAACTGGCAGGGCAA 27225 |||| | || | | || |||||||| || | ||||| || |||||||| || |||| Sbjct 44076 GAATAGTCATGGCTCTGGAAGATGTAGACAAAAGACTTGTAGGCATAACTGGGAGAGCAA 44135 Query 27226 CCAAAGCAGATCAACCAGAAAAGTTCATGCACCGACCAAGAAACCTGCACACAGGGTTTT 27285 |||||||||| ||| |||||||||||||| || || |||||| | ||||| || | | Sbjct 44136 CCAAAGCAGAACAAGTGGAAAAGTTCATGCATCGTCCTAGAAACTTACACACTGGTTACT 44195 Query 27286 TCCTCACAGGGCTGGGAAGGAACAAGAAGTTCCTCGAAGAGTACGGCTACACGGTTAAAA 27345 | ||||||||||| || || ||| ||| | || |||| | |||| ||||| | Sbjct 44196 TTCTCACAGGGCTTGGTAGAAACTTGAAATATGTCCAAGAAGCAAACAACACAGTTAAGA 44255 Query 27346 TCGTTGAGGGTGTTTTTGATTGTGCTCGGTGGTATGACTCAGGACATAAAAACGTTTGCG 27405 | || ||||| |||||||||||||||| |||| ||||| || |||||||| || ||| Sbjct 44256 TTGTAGAGGGGCTTTTTGATTGTGCTCGCTGGTGGGACTCTGGTCATAAAAATGTATGCT 44315 Query 27406 CACCTATTGGTGTATTCTTCACAGAAGAGCATATTGACCAGCTTTACAAAGCAGGGGTAA 27465 || ||||| || |||||||| || |||||||| || || || || ||||| |||| Sbjct 44316 GTCCAATTGGAGTGTTCTTCACCGAGGAGCATATCTTACAACTCTATAAGGCAGGTGTAA 44375 Query 27466 TTGGCATCGACCTCGGGTTTGATAACGATCCAGCAGGAAGAAACGGGATCAGGAGAGC-T 27524 | || |||| ||||| || ||| |||||| | ||||| | | | || | Sbjct 44376 CAACTCTTGAAATCGGTTTTGACAATGATAAAGCAGGTCGTAACGGATTTCGTAAGGCGT 44435 Query 27525 ATCAAGAGAGCCAAGTACAAGTTTGATATTCATGTACTGGTTTACCCAGAAGGAAAAGAC 27584 | ||| | |||||| |||||||| | || || | ||||||||||| |||| Sbjct 44436 ACCAA-AAAGCCAAAGGTAAGTTTGAGGTCTATTACCTTATGTACCCAGAAGGGCAAGAT 44494 Query 27585 GCTGATGACTGCACCAAAGAAGAGCTTGACGAGGTAGACAAAAAT 27629 ||||| || | |||||||| || ||| | |||| || ||| Sbjct 44495 GCTGACGATTTGCGAAAAGAAGAACTCGACAAAGTAGCTAAGAAT 44539 Score = 181 bits (200), Expect = 3e-41 Identities = 217/288 (75%), Gaps = 5/288 (2%) Strand=Plus/Plus Query 10154 TTGAAAAACAAGAATATCCGTGACGCATTCCGTCAGAATAACACAGACGTTGCATTGCTT 10213 |||||| | || | || ||||| || |||||| |||| |||||||| ||||| ||| | Sbjct 26856 TTGAAACAAAAAGACATTCGTGATGCGTTCCGTGAGAACAACACAGATGTTGCTTTGTTA 26915 Query 10214 CGTGGATACATTGGCGACTTTATGGGTCTTAGC-TTTATTGTTGATTCTCACTTCCAAGA 10272 ||||| || ||||||||||| ||||| |||| | || || | ||| |||| || Sbjct 26916 CGTGGCTATATTGGCGACTTCATGGG-CTTATCGTTCATCGAGGATGAAAACTTTGCGGA 26974 Query 10273 GGACAACGCTTTAATCCTACAAAAGAAAGTAATCGGTGATATTGCTGATGCTGAGCCATT 10332 | ||| || || || | || || |||||||| |||||||| |||||| || Sbjct 26975 TGGTGACGTATTGTTCGTAGAGAAAAAGACTATCGGTGAAATTGCTGACGCTGAGGGCTT 27034 Query 10333 ACGCACATACACTTACAACGAGGAAAGCA-ACGAGCGTACTATTGTACGTGCAACTCGTT 10391 ||| || | |||||||||| ||||| | || ||||| ||||||||||||||||| | Sbjct 27035 ACGTACTAAGGTATACAACGAGG-AAGCAGAAGACCGTACGATTGTACGTGCAACTCGCT 27093 Query 10392 TCACTAACGCTTACTTAACAGACCCTAAAGCGGTTTACCTGATTAAAG 10439 |||| | |||||| |||||||||||||||||||||||||| |||||| Sbjct 27094 ACACTCAAGCTTACCTAACAGACCCTAAAGCGGTTTACCTG-TTAAAG 27140 Score = 141 bits (156), Expect = 3e-29 Identities = 404/613 (66%), Gaps = 16/613 (3%) Strand=Plus/Plus Query 25805 GTAGGTCAATCAGTTAAGAAGCTCGGTGAGGGTATCCGAGATAGGATGAAACAAAGGGCA 25864 |||| ||| |||||| ||||| || || ||||| |||| | | |||||| | || Sbjct 42514 GTAGCGCAAGGAGTTAAAAAGCTAGGGGAAGGTATTGGAGAGCGACTCAAACAACGAGCC 42573 Query 25865 ATGGCTCCCAAGGATGTAATAGGCATTAAAACTGGATGGGGAGCATTTGACTTAGCCGCA 25924 || || | || || ||||| | || || |||||| || || ||||||||| | Sbjct 42574 TTGAAGCCACAAGACGTTATAGGACTCAAGACAGGATGGCACGCTTTCGACTTAGCCTCT 42633 Query 25925 AGGGGTTTAGTTGACGGAGAGCTTACGGTCGTAGGAGCCAGACCAAAGGTCGGTAAATCT 25984 ||||||||| ||| ||| | || |||||||||| | | || |||||||| ||| Sbjct 42634 CAAGGTTTAGTTATCGGTGAGTTGACTATCGTAGGAGCTCGCTCCAAAGTCGGTAAGTCT 42693 Query 25985 ACAGTTTTACTTAATTGGTGCAAAAAGATATGTCTCGATGATGGTATTCCAGTTCTGTAT 26044 ||| ||||| || ||||| |||||||| ||| | || || || | || | | ||| Sbjct 42694 ACAACGTTACTAAACTGGTGTAAAAAGATTTGTGTTGACGACGGAGTACCTACTTTATAT 42753 Query 26045 ATCGACACTGAGAACTATTCCCATGAGCAGGAAGACAGATTACT-CTCATTATTGTCTGG 26103 ||||||||||||| || ||| ||||||||||| | |||| |||| | ||||| Sbjct 42754 ATCGACACTGAGATGTACGACCACGAGCAGGAAGATAAGCTACTGAGTATTA-TCTCTGG 42812 Query 26104 TGTTGACCATACAGAAATAGAAAACGGTCAATTCGCAAGGGATACGTTCAATGGTGATGC 26163 || | || |||||| ||||||| | || || | ||||| ||| || Sbjct 42813 AGTCCAGCACCATGAAATACGAAACGGTTACTTTGCTCGTAATACGGAGTTTGGAACTGG 42872 Query 26164 TAAAACGAAAATGAAAGCCGTGGCGGAAGCATCTAGGATTATCGAATCAGGTAACTTCCA 26223 || ||| |||| || || ||||| || | |||| | || | ||| | Sbjct 42873 CAAGGAGAAGGCTGAAGCGGTTGCAGAAGCTAGTAAGGCTATCTCAAAAGCTCCTTTCTA 42932 Query 26224 TCATATTTATTTACCATTCTTCACACCTGATAAGATTGAACACATCGTA---AGGGAGTA 26280 || || ||| | ||| ||| || | |||| | || |||| || || | Sbjct 42933 CCACATCTATATGCCAAACTTTACGTTAGCCGAGAT---AGCCAGCGTAATTAGAAAGCA 42989 Query 26281 CCAGATCAATCATGGTAT-CAGACTAGTGTGCTTTGATTATATCAAGTTACCA---TCGA 26336 |||||| | || ||||| ||| || || ||||||||| || ||| ||||| || | Sbjct 42990 CCAGATAGAACACGGTATACAG-CTCGTAGTCTTTGATTACATTAAGCTACCAAGCTCAA 43048 Query 26337 GTGATAGCAAACTCGGGGATAAAGAGTGGCAACAACTAGGGTACCTGACAAGCAAACTTA 26396 | || || | || || |||||||||||| || || ||||| ||||| ||| | Sbjct 43049 ---ACAGTAACTTAGGAGACAAAGAGTGGCAAGCTCTTGGATACCTTACAAGTGGACTAA 43105 Query 26397 AAGACTTAGCAGG 26409 |||||||||| || Sbjct 43106 AAGACTTAGCTGG 43118 Score = 87.8 bits (96), Expect = 6e-13 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 15745 CCGTTCTCCCCAGCTAAAGAAGGTCCATTGAAAGACCTTGACAAATCAGGTGAGTCATTC 15804 || ||||| ||||| || ||||| | | | ||||| |||||||| ||| |||||||| Sbjct 32580 CCATTCTCACCAGCCAAGAAAGGTGCTCTAAGCGACCTAGACAAATCTGGTAAGTCATTC 32639 Query 15805 TTCCCGACTTGGTACGAGGCGGCATTGAAAAAGGTTAGCCCGATGACTAAAGCAGTCGGA 15864 ||||| || ||||||||| | || | | | ||||| || ||||| | ||| |||| Sbjct 32640 TTCCCAACATGGTACGAGTCAGCTCTAACTCAAGTTAGACCAATGACGAGAGCTATCGGT 32699 Query 15865 GGAGCAATGAG 15875 ||||| ||||| Sbjct 32700 GGAGCTATGAG 32710 Score = 86.0 bits (94), Expect = 2e-12 Identities = 187/277 (68%), Gaps = 10/277 (4%) Strand=Plus/Plus Query 31883 TTCGTTGACAGAATAGATGGAGA---TAAAGACGACCCTTCTAGTTGGATCGTGACAGAC 31939 ||| ||||| ||||||| ||||| | ||||| |||||| |||||| || || || Sbjct 2300 TTCATTGACCGAATAGACGGAGACCCTTCAGACG---CTTCTACTTGGATTGTAACGGAT 2356 Query 31940 TACAAGACAGGATCAAACCCTAAGAGTAAACAATACTTAAGCGATGATCTACAGCTAGGT 31999 || || | || |||| |||| || | || | | ||||| ||||||| | | Sbjct 2357 TATAAATCTGGCTCAAGTGTTAAGTCAAAGCCATTTCTGACTAATGATATACAGCTCGCT 2416 Query 32000 TTGTACGTTGC--TCAGATTCACTCAGAGTTTGGAGCATACCCAAAAGCTGTACAATTTT 32057 |||||| | | | ||||| ||||||||| || ||||| ||| || | | Sbjct 2417 GTGTACGCTCAAATGATATTCAA--AGAGTTTGGGGCTTACCCTCAAGTAGTGAGCTACT 2474 Query 32058 ATCACCCTGTCATAGACAAATTCCAGACAGCTATACACCAAGGAGACGGAGTATACAGGT 32117 |||||| || ||| |||| | || | |||||||||||||||||||||| |||| | Sbjct 2475 TTCACCCAGTTATAAACAAGTGGCAAAAAGCTATACACCAAGGAGACGGAAACTACAAAT 2534 Query 32118 TCACCAATCAGCGTGCTCCAGTGGTTGAATTCTCTGT 32154 || || |||||| || || || |||||||| Sbjct 2535 ATACGAACCAGCGTAACCCTGTAGTCACTTTCTCTGT 2571 Score = 84.2 bits (92), Expect = 7e-12 Identities = 209/314 (67%), Gaps = 10/314 (3%) Strand=Plus/Plus Query 29460 GGCTCTGGAGCTGGCTCTCTTGTCGCTTACCTTCTGGATATCACAGAGGTTGACCCAATC 29519 ||||| | || |||||| || || |||||| | || ||||| || ||||||||||| || Sbjct 50960 GGCTCAGCAGGTGGCTCACTCGTAGCTTACTTACTTGATATTACGGAGGTTGACCCTATA 51019 Query 29520 AAACATGGTCTGTTCTTCGAGCGCTTCCTAGATATCACCAGACAGAAGATGCCCGATATT 29579 ||| ||| | | || |||||||||||||| | || | |||| | || ||||| Sbjct 51020 CCACACGGTTTATATTTTGAGCGCTTCCTAGACGTTACTCGCTTGAAGTTTCCAGATATC 51079 Query 29580 GATACAGACATCCAGTCAGAGCGCCGCCACGAGTTGTTCACTTATCTTA-AAGAGAAGTA 29638 || ||||| || || | ||| ||| | ||| || | | || |||| ||||||| Sbjct 51080 GACACAGATATTGAGGACGTGCGACGCTATGAGCTGATTAAGTA-CTTACGTCAGAAGTA 51138 Query 29639 CGGATATAATCGAGTCGCTCAAGTGACGAAC----TATACAAAGATGTCTGCAAAATCAG 29694 ||| | | || |||||| | |||| | ||| ||| || || ||| Sbjct 51139 TGGAGCTGACAAGGTAGCTCAAATAGTGAACATGGTTTAC----ATGAACGCTAAGACAG 51194 Query 29695 CCTTCAAGAATGCATTGATGATTTATGATGTACCCTTTGGAAAGTCTCAAGAGATCACAA 29754 | | ||||||||| ||| | ||||| | || ||||| | || || |||| || | Sbjct 51195 CTTACAAGAATGCTCTGACAGTCTATGACATTCCGTTTGGCGACTCACAGAAGATTACTA 51254 Query 29755 ATTTGATCCCTGAC 29768 | |||| |||||| Sbjct 51255 ACATGATACCTGAC 51268 >seq222169 Length=327 Score = 136 bits (150), Expect = 1e-27 Identities = 132/170 (78%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 3226 ACAGCAGAAGAAATaaaaaaaaTGCGTAACGTTTTGCGTGATCCAGTAGGCTTTACCGAG 3285 ||||||||| | | | || ||||||||| || ||||||| || ||||| || || ||| Sbjct 172 ACAGCAGAACAGCTCCACAAGATGCGTAACATTATGCGTGACCCTGTAGGATTCACTGAG 113 Query 3286 AAGACAGGAACCGTAAAGGGTAAACCCTTCAAGTTTAAGCACCGAGAGCACTTGTATGAT 3345 ||||| ||||| |||||||||||| |||||||||| | ||| | ||||||||| | ||| Sbjct 112 AAGACTGGAACTGTAAAGGGTAAAGACTTCAAGTTTGACCACAGGGAGCACTTGCACGAT 53 Query 3346 GTATACCGAGACAAACACCCTCGTATAGTTATCGTAGCAGGTCGTCAGGT 3395 || || ||||| |||||||| || || || ||||| || || || || Sbjct 52 GTCTATAGAGACCCTCACCCTCGAATTGTCATTGTAGCTGGACGACAAGT 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157007377283256