Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_020479.1 Length=49425 Score E Sequences producing significant alignments: (Bits) Value seq78791 562 1e-155 seq222169 140 1e-28 seq249645 84.2 7e-12 >seq78791 Length=51567 Score = 562 bits (622), Expect = 1e-155 Identities = 1096/1601 (68%), Gaps = 65/1601 (4%) Strand=Plus/Plus Query 3238 CAGCAGAAGAAATAAAGAAAATGCGTAACATTTTACGTGATCCAGTAGGCTTTACCGAGA 3297 ||||||| || | ||||| ||||| ||| || | | || || | || || || |||| Sbjct 19713 CAGCAGAGCAACTCAAGAAGATGCGGAACGTTATGAGAGACCCTATCGGATTCACTGAGA 19772 Query 3298 AGACAGGAACCGTCAAGGGTAAACCCTTCAAGTTTGACCACCGAGAGCACTTATATGATG 3357 ||| || || |||||||||||| | |||||||| |||||||||| |||||| | || | Sbjct 19773 CGACTGGGACTGTCAAGGGTAAAGCTTTCAAGTTCGACCACCGAGGTCACTTACACGAGG 19832 Query 3358 TATACCGAGACAAACACCCTCGTATAGTCATCGTAGCGGGTCGTCAGGTTGAGAAATCCG 3417 | ||| ||||| |||||| | | ||||| ||||| || || || || ||||| || | Sbjct 19833 TCTACAGAGACCCTCACCCTAGAGTTGTCATAGTAGCTGGACGACAAGTAGAGAAGTCTG 19892 Query 3418 AGACAGTTAACCGTCTTATCCTCTTCCATGGATACACGAGACCGCACACAACCATTACAT 3477 |||| ||||||||| | | |||| ||| |||||| | || | || || || ||||| | Sbjct 19893 AGACGGTTAACCGTTTGCTACTCTACCACGGATACCAGCGAGCCCATACTACGATTACCT 19952 Query 3478 ACACGGCACCTCGTAACGAACAGACAACCCGTTTTGTCAACGACCGTTTCAGAAAGTCCA 3537 |||| || || ||||| || || ||||| ||||| ||||||||||| || |||||||| | Sbjct 19953 ACACAGCTCCACGTAATGAGCAAACAACACGTTTCGTCAACGACCGCTTTAGAAAGTCTA 20012 Query 3538 TTGCAACATCGAATGGA-GCAGTTCTT----GAAGGAGATGTCAACAAAAACCGAGATGC 3592 | ||| |||| | |||| ||| ||| || || |||| || || || || Sbjct 20013 T----ACAG-GAATCTAAGCAGGGCTTACTCGAAAGAATGGTAGACAAGAAGCGTGACGC 20067 Query 3593 AAAGACGGCTATCGGGCTAAAAAACAATACAACGTACTATTTTGGTTCATCATGGGCTGA 3652 ||||| ||||| || |||| ||| |||| |||||||||||| ||| | |||||||| Sbjct 20068 TAAGACAGCTATTGGACTAATTAACTCTACAGTGTACTATTTTGGCTCAGCGTGGGCTGA 20127 Query 3653 TGGAGATGCTCTCCGTGGTATCTCTGGTGATATGGTATTCTTTGATGAGGTTCAGGACAT 3712 |||||||||||||||||||| |||| ||||| || | || |||||||| ||||| || Sbjct 20128 CGGAGATGCTCTCCGTGGTATTGCTGGCGATATAGTTATGTTCGATGAGGTACAGGATAT 20187 Query 3713 TGGGCAGACAGCTATTGAGTCAATTGAAAAGAGTATATCCCACTCAGAGATACAGGATGC 3772 | ||||||||||| ||||||||||| ||| | | || || ||||| | || | Sbjct 20188 TACACAGACAGCTATCGAGTCAATTGAGAAGTCTGTCTCACATAGCGAGATTAAAGACCC 20247 Query 3773 GGTAACTGAGATAAACGGACGGTGCTTCTACACAGGAACACCAAAACAGAAGGGCTCCTA 3832 || |||||| | || || ||| ||||||||||| || ||||||||||| ||||| || Sbjct 20248 TGTTACTGAGCTGAATGGTAAGTGTTTCTACACAGGTACGCCAAAACAGAAAGGCTCTTA 20307 Query 3833 TTACGACAAAGTCCTCTGGGGTAACTCTGATCAGAAGAAATGGTCAGTATGCTGTGAGCA 3892 |||||| ||| |||||||| | ||| | |||||||||||| || | ||| | Sbjct 20308 CTACGACCGAGTACTCTGGGGACAATCTAACCAGAAGAAATGG--AGCGTTGAGTGCTC- 20364 Query 3893 ATGCGGTCATGATCAATTCCTATCAATGAAAAACGTCATGGTTCAAAACGAAGGAGAAGA 3952 || ||||| | ||||| | | ||||||||||| |||||| || || ||| || Sbjct 20365 TTGTGGTCACCACCAATTTATGACTATGAAAAACGTAATGGTTATGAATGAGGGAACTGA 20424 Query 3953 AAACGAGCGGAGATACTTTGGGTGCCTTGAGTGTGAAGCAGAATTGAACCGTGAGAATGG 4012 | ||||| | |||||||| || || ||||||| | || || |||||||| ||| Sbjct 20425 CGAGGAGCGTCGCTACTTTGGCTGTCTGGAGTGTGGCGAGGAGTTAGACCGTGAGCGTGG 20484 Query 4013 GCGCTGGATCAAAACACGACCAAACAACAAGCGTTACAGCGGGTACCTGTTCAACCAGCT 4072 ||| | ||| ||| | |||||| ||||| || ||| ||||||||||||| Sbjct 20485 CTCGTGGGTAGTAACGAAACCTCATAACAAGATGTACAGTGGCTACTTGTTCAACCAGCT 20544 Query 4073 CAATATGGCATGGATCAGTGCCAATCAAATCTGGCACGATTATAACAACATGGATGACAT 4132 |||||| | ||||| ||||| || |||||||||| || | || | ||||| ||| Sbjct 20545 TAATATGACTTGGATTAGTGCAAACCAAATCTGGCGTGACTTTACGACTATGGACTCCAT 20604 Query 4133 GACCTTCCACAACGAGGTGCTAGGAGAATTCTACTCGGGGGATGAACAGCCACTTTCTTA 4192 ||| |||||||||||||| || ||||| || || || ||||| || ||| | | Sbjct 20605 GACATTCCACAACGAGGTACTGGGAGAGTTTTATAGCGGAGATGAGCAACCAGTAACCCT 20664 Query 4193 TGAGGACGTACTGGCATGTACAGATAAGA-GCTTGTCCTTACAAAGTAAATGTGATATCC 4251 |||||| ||||| || ||| || | |||| |||| | || | ||| | | Sbjct 20665 TGAGGATGTACTAGCTTGTTGTGACCGCACGCTT-AGCTTAAAGAGACGCTCTGACACGC 20723 Query 4252 CAACCGTCATGGGTATTGACTATGGCTCTGGTGGACAATCCAAGACGATCATTACAATTG 4311 |||| || ||||| ||||||||||| |||| | | || || || || ||||| |||| Sbjct 20724 CAACTGTAATGGGGATTGACTATGGTAGTGGTAGTAAGTCTAAAACAATTATTACTATTG 20783 Query 4312 GTCACGAAACAATGCACAAAGGCAAGAAAAAGCTCCTAATCGTCCACATGGAGAGCGCTC 4371 || || || | || ||||| | || | |||||| |||||| Sbjct 20784 GT------------CATAATTGGGAGGGTAAGCTTGTGATTGACCACATTGAGAGC-TGG 20830 Query 4372 CTAACATGGATACAGACGA-GCGTATTGCTTATAT---CAACTCTTTG-----------A 4416 ||| || |||| |||| | | | | | || |||||| ||| | Sbjct 20831 CTACCA--GATAAAGACAACCCAGACAACCAACATGACCAACTCATTGAGTATCTGTGCA 20888 Query 4417 AGC------ACAGATATAACGTCCAGAAGATTAATGGTGATATTGGGTATGGTCAATATG 4470 ||| || || ||||| |||| || ||||| || || || ||| || | Sbjct 20889 AGCTACAAGCCATCTACAACGTTGAGAAAATAGTCGGTGACATCGGTTACGGTTCTTACG 20948 Query 4471 AG--GGGGAATCCTTCTATGCCATGTACGGAAGAGAAGCCATCTCTACAAGATACGTAAC 4528 || ||| | | |||| ||| || || || | || ||||| |||||||| || Sbjct 20949 AGTCTCAGAAGC--TATATGGCATCTATGGTAGGAACGCTATCTCATGTAGATACGTTAC 21006 Query 4529 CTACCAGACTAACCCTAAAAAGCGTGA-AATAAAAGA-TAAATTCGTC----CTACAAGT 4582 || || | |||| || ||||| ||||| || | ||| || ||||| || Sbjct 21007 GTATGCGAATGACCCACGGAAACGTGAGTATAAAGGATTCAATAACTCAACTCTACAGGT 21066 Query 4583 AGACAGAACGTTCTCAATGGATTCACTTA-TCATGGCTTTCAAGCGTGGAGAGATCGTCA 4641 |||| | || |||||||||||| |||| | || || || || | | || || | Sbjct 21067 AGACCGTACTTTCTCAATGGATAAGCTTATTGATATGTTCCATAAGTCTA-ACATAGTTA 21125 Query 4642 TCCCTTACAGTGACCCAGATAAGGTAGAAATGTTCTTTGACCACTATACAGCCATTGAGG 4701 | || |||| | ||||| |||| || |||||||||||||| ||||| ||||| Sbjct 21126 TTCCGTACAAGCAACCAGAGGAGGTTGAGTACTTCTTTGACCACTACACAGCTATTGAAA 21185 Query 4702 CGGTCTTCTCAGAGTC-AACTCAAGGTACTGGACGCAAGAGATACGACCACAGAACGCCA 4760 | | ||| | ||||| ||| | || || |||| || |||||| | || ||| Sbjct 21186 TGATATTCACCGAGTCGAACAC-TTCCACAGGTGTTAAGAAGTATGACCACCGTACTCCA 21244 Query 4761 GACGATGCATTCCACTCCCTGAACTATGTCCGTGAGGGCAT 4801 ||||||||||||||| | ||||||| || | ||||| || Sbjct 21245 GACGATGCATTCCACAGCTTGAACTACGTTAGAGAGGGTAT 21285 Score = 407 bits (450), Expect = 5e-109 Identities = 735/1062 (69%), Gaps = 17/1062 (2%) Strand=Plus/Plus Query 5118 GAGCGTCCAGACCAAGAGGACTTTAACCCCTCAGACTTTTCCCTTGAAGTATACGACAAG 5177 |||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| Sbjct 21605 GAGCGTCCAGACCAGTTAGACTTTAACCCCTCAGACTTTGACCTTGAAGTATGGGACAAA 21664 Query 5178 ATGATGACAGATGGTCAAGTTAAGTCCGCCCTTGATATGATCAAGCTATCAGCAACCGCA 5237 |||||||| || || || ||||| | | | | |||||||| |||||||| | || Sbjct 21665 ATGATGACCGACGGACAGGTTAAAGCTGGCTTAGATATGATTAAGCTATCTTGCTCGGCT 21724 Query 5238 AAAGGATTCACCGTAACAGGTGACGACGAGGAGTCAAAAAAGTATGCTGACTTCATCAAT 5297 || ||||| | |||||||||||||||||| | |||||||||||||| || || Sbjct 21725 CGTGGCTTCACTATTACAGGTGACGACGAGGAGACTAAAAAGTATGCTGAGTTTATTTCA 21784 Query 5298 GAGAACTTTGAAATGATCCGAGGAAACATGGAAGATGTACTCAAAGAGATCATGACAGCC 5357 | |||||||| ||| || || |||||||| || ||| | ||||| | |||| Sbjct 21785 TATAACTTTGAGTCGATTCGTGGCAACATGGAGGACGTAATTGGTGAGATGCTTTCAGCT 21844 Query 5358 CTTGAGTATGGCTATAGCTGTACAGAGAAGGTCTTCGAGTA---TAAAAATGGCAAGATC 5414 || ||||||||||| ||| || ||||| || ||||| |||| || | ||||| Sbjct 21845 CTAGAGTATGGCTACTCAGTTACGGAAAAGGTATTTGAGTACGATAAAGATAGAAAGATA 21904 Query 5415 ATGCTCAAGAAGCTGAAAACACTTGACCCTTATAGTGTGGCAGGCAAGACGGATCGTTTT 5474 | | |||||||| ||||| || ||||| | | | | |||| || ||| Sbjct 21905 GTTTTAAAGAAGCTTAAAACGCTAGACCCACACAAGTTAACTTTAAAGATTGACAAGTTT 21964 Query 5475 GGCGACCTCATGTATGTTAAACAACGCATCGGA-AGCAAAACAATCAAAATACCTGCTGA 5533 || || | ||||||| || || || |||| | | | | | |||| ||| Sbjct 21965 GGTGATTTAGTGTATGTACGTCAGTCGATTGGTCAGCACGAGATTGATA-TACCAGCTAG 22023 Query 5534 TAAAGTCTTATGGTATGCC--CATCAAAAACGCTTTGGTAATATCTACGGTCAATCCAGA 5591 ||| || || ||| | ||| | || |||||||| || | |||||||| || Sbjct 22024 TAATGTG--ATTCTATACAGTCATGACAAGCGCTTTGGCAACCTTTACGGTCAGTCAGCT 22081 Query 5592 CTAAGAACGGTGTACAAGCACTGGTTCATCAAAGATAAAATGTACAGATTCGCCAACATT 5651 || ||||| || |||||||||||| |||| || ||||| ||||||||||||| |||||| Sbjct 22082 CTGAGAACAGTCTACAAGCACTGGCTCATTAAGGATAAGCTGTACAGATTCGCTAACATT 22141 Query 5652 GCTTATGAGCGCTATGGTACACCCCTTTTAGTTGGATCAGTAGAGGACAAAAATGATGTA 5711 || || ||||| ||||| ||||| || ||||| || |||| ||||| || ||||| Sbjct 22142 GCCTACGAGCGTTATGGAACACCGCTATTAGTCGGTAAAGTACAGGACGCTAACGATGTT 22201 Query 5712 CCTGAGATCACACGCCTTTTGAGAAACATCAATGGTATGACTGGACTAGGACTATCTGGC 5771 | || | | || |||||| || || | |||||| || | ||||| Sbjct 22202 GACAAAATGAATAGTCTATTGAGACGGATTAACAGCATGACTTCTCTGTCCATCTCTGGT 22261 Query 5772 GGAGCTGATGTAAAAGCTATTCAGACAACTAACGCAGACTTCATTGGATACATTGAGCAC 5831 || || || ||||||||||| | | |||||| ||||||||||| |||||||||||| Sbjct 22262 CAAGACGACGTGAAAGCTATTCAAATGAGTAACGCTGACTTCATTGGTTACATTGAGCAC 22321 Query 5832 CACGACCGCAAGATCATGGAATCACTCCTTGTACCGCCATCCCTTCTAGGATTATC--TC 5889 || ||||||||||| ||||| | | || || || || | || || |||| || Sbjct 22322 CATGACCGCAAGATTATGGAGGCTATGCTAGTTCCACCTATGTTGCTTGG--TATCGGTC 22379 Query 5890 GTGGTCAATCTGGCTCTTATGCGCTGTCTTCAAACCAATTTGACATCTTTATGATCCACC 5949 | || || |||||||| || || || || ||||| |||||| | || |||| || Sbjct 22380 GAGGACAGTCTGGCTCATACGCTCTTACTAATAACCAGTTTGACGTATTCATGA-GCAGA 22438 Query 5950 TTGAAAGTATT-CAGCGTGACATCAAATCACTTATCGAGGAAGAAATAATCAGACCATTG 6008 || ||| || ||||||||| | || | ||||| ||||| ||| | || |||||| | Sbjct 22439 TTAGAAGCGTTACAGCGTGACTTGAAGGCGCTTATTGAGGAGGAAGTCATTAGACCACTA 22498 Query 6009 GTTGATCTGAACTTCCCTAACGTTACAAGGTACCCTTCGTTCACATTCAAGCCTTTAGCA 6068 | || | ||||| |||||||||| | |||||||| ||| |||| || | || Sbjct 22499 ATCGACTTAAACTTTCCTAACGTTAAGAAATACCCTTCATTCCAATTCCGTCCACTTGC- 22557 Query 6069 GATCGA-GACATCGACAAGCTGTCAAGTGTATTTGAGAAGTTGATCAACGCTTCTGTCAT 6127 | ||| ||||| | ||||| | | ||||| | || |||| | ||| || || Sbjct 22558 TAACGAGGACATTCAAAAGCTTGCTAACGTATTCATGCAGATGATTACAGCTGGAGTTAT 22617 Query 6128 TGCCCCTGAGGAAGACTGGTTACGTGAAGAGCTTGGCTTCCC 6169 || || ||||| ||||||||||| || ||||||||||| Sbjct 22618 TGATGCTAGTGAAGATTGGTTACGTGAGGAACTTGGCTTCCC 22659 Score = 304 bits (336), Expect = 4e-78 Identities = 413/568 (73%), Gaps = 16/568 (3%) Strand=Plus/Plus Query 30511 GGAATGCGTGACTTGTGTAAACAAGTTCAACCTACTGAGTTTAAACACATTGTAGCGATC 30570 ||||||| | || |||||| || || |||||| ||||| | || | |||||||| Sbjct 200 GGAATGCAACAATTATGTAAAGCTGTACAGCCTACTAAGTTTGAGCATCTCGTAGCGATT 259 Query 30571 AACGCTTTGTACCGTCCACCAGCTTTAGCCTCTGGAGATACTTGGAGATATGCCAATATC 30630 | || |||||| | |||||||| ||||| |||||| ||||||||||| || | || Sbjct 260 ACAGCATTGTACAGACCACCAGCATTAGCTAGTGGAGACACTTGGAGATACGCTGACATT 319 Query 30631 AAGAATGGCAGAGAGGAAGAGCGATACAGCCACCCAGAGGAAAAACAAATCACAGGTGAG 30690 |||||||| | || || |||| |||||||||||||| || || | || ||||||||| Sbjct 320 AAGAATGGTAAAGCTGAGGAGCATTACAGCCACCCAGACGAGAAGCGCATAACAGGTGAG 379 Query 30691 ACTTACGGGGTTATCACTTATCAGGAACACGTTATGCAACTTGTACA-TCATTTTGCTGG 30749 || | || || || || | || || ||||||||| | ||||||| ||| |||||||| Sbjct 380 ACCTTTGGAGTCATTACCTTCCAAGAGCACGTTATGGAGATTGTACACTCA-TTTGCTGG 438 Query 30750 ATGGGATTACGGACGAGGTGACAAGCTCCGTAAGATGAGTGCAGAACAACTTGAAGAACT 30809 |||||||| |||||||| ||||| || |||||| ||||| || ||||||||| || Sbjct 439 TTGGGATTATGGACGAGGCGACAAACTACGTAAGGCTAGTGCTGAGGAACTTGAAG--CT 496 Query 30810 AAGAG--CAGAATTTATCTGGGACTCTGTTTCGAACTTCGATTATGATCAAGACAACGTT 30867 | | | |||| ||||| ||| || ||| | | | || |||||| Sbjct 497 ATGCGCTCAGAGTTTATTGAGGATGCTTGCAAGAAGTACTCACACGA--CGCACAACGAA 554 Query 30868 GAGTTTATAG--CTCAGATGGGTGACTTATGGGATCGTATTGTCCAGTACATGGGTTACG 30925 || || | | ||||||||| ||| | ||| ||||||||| |||||||||||||||| Sbjct 555 CAGCTTTTCGCTCTCAGATGGATGAGCTTTGGAGTCGTATTGTACAGTACATGGGTTACG 614 Query 30926 GATTCAATAAGTCCCACGGAGTAGCTTACTCTATGTTGACATACCTCACGGTATTTCTGG 30985 | ||||||||||||||||||||||||||| ||||| | || || | || | || || | Sbjct 615 GTTTCAATAAGTCCCACGGAGTAGCTTACACTATGATTACTTATATGACAGCATGGCTAG 674 Query 30986 AGCATTACTATCCAGAGCACTACATGTCAGCGATACTCACGAG---TAAAATGTCAGACC 31042 |||| ||| |||||||||| | ||| ||| | ||| ||||||||||||| Sbjct 675 AGCACCACTTCCCAGAGCACT---TCCAAGCCTCACTAATGAGTACTAAAATGTCAGACA 731 Query 31043 AAGAGACATTGGCTAAAGTGTTCCAAGA 31070 |||| | | | ||| || | |||||||| Sbjct 732 AAGACAAAATAGCTCAAATATTCCAAGA 759 Score = 253 bits (280), Expect = 6e-63 Identities = 447/645 (69%), Gaps = 10/645 (2%) Strand=Plus/Plus Query 27279 AGAAGAGGCAAGAAAGTTCATTGAAAGAATGATGAGAAAGCAAGACAAAAAGGAG---CT 27335 ||| ||||| ||||||| || ||| ||||| || ||| | ||||| || | || Sbjct 43900 AGACGAGGCTCGAAAGTTTATCGAACAAATGAGGA---AGCGACACAAACAGCACACTCT 43956 Query 27336 CCCTACGTTTAAGATGCCAAGAATGAAACTAGCAAAGGTTAGCTCCTACAGAGGATACTC 27395 || | || ||||| | || ||||| | || || || | | ||| ||||| ||||| Sbjct 43957 ACCAGCTTTCAAGATTCAAAATATGAAGTTTGCTAAAGTGAACGACTATAGAGGTTACTC 44016 Query 27396 ACCAGAGACCATT-ACACATTGGAAGTTCTTCCTTGCTAAAGATGGAGAGCTACAAGACA 27454 || ||| | || || | | || | | |||| | ||| || || || |||||| Sbjct 44017 ACAAGAAGCGCTTGACTGGTGGAAAATACGATATTGC-ACAGAAGGCGAACTCAAAGACA 44075 Query 27455 GAATCATTATTCCCTTCGAGGATGTAGATAACCGCCTTGTTGGTATAACTGGCAGGGCAA 27514 |||| | || | | || |||||||| || | ||||| || |||||||| || |||| Sbjct 44076 GAATAGTCATGGCTCTGGAAGATGTAGACAAAAGACTTGTAGGCATAACTGGGAGAGCAA 44135 Query 27515 CCAAAGCAGATCAACCAGAAAAGTTCATGCACCGACCAAGAAACCTGCACACAGGGTTTT 27574 |||||||||| ||| |||||||||||||| || || |||||| | ||||| || | | Sbjct 44136 CCAAAGCAGAACAAGTGGAAAAGTTCATGCATCGTCCTAGAAACTTACACACTGGTTACT 44195 Query 27575 TCCTCACAGGGCTGGGAAGGAACAAGAAGTTCCTCGAAGAGTACGGCTACACGGTTAAAA 27634 | ||||||||||| || || ||| ||| | || |||| | |||| ||||| | Sbjct 44196 TTCTCACAGGGCTTGGTAGAAACTTGAAATATGTCCAAGAAGCAAACAACACAGTTAAGA 44255 Query 27635 TCGTTGAGGGTGTCTTTGATTGTGCTCGGTGGTATGACTCAGGACATAAAAACGTTTGCG 27694 | || ||||| | |||||||||||||| |||| ||||| || |||||||| || ||| Sbjct 44256 TTGTAGAGGGGCTTTTTGATTGTGCTCGCTGGTGGGACTCTGGTCATAAAAATGTATGCT 44315 Query 27695 CCCCTATTGGTGTATTCTTCACAGAAGAGCATATTGACCAGCTTTACAAAGCAGGGGTAA 27754 || ||||| || |||||||| || |||||||| || || || || ||||| |||| Sbjct 44316 GTCCAATTGGAGTGTTCTTCACCGAGGAGCATATCTTACAACTCTATAAGGCAGGTGTAA 44375 Query 27755 TTGGTATCGACCTCGGTTTTGATAACGATCCAGCAGGAAGAAACGGAATCAGGAGAGC-T 27813 | | || |||||||||| || ||| |||||| | |||||| | | | || | Sbjct 44376 CAACTCTTGAAATCGGTTTTGACAATGATAAAGCAGGTCGTAACGGATTTCGTAAGGCGT 44435 Query 27814 ATCAAGAGAGCCAAGTACAAGTTCGATATTCATGTGCTTGTTTACCCAGAAGGTAAAGAC 27873 | ||| | |||||| ||||| || | || ||| | ||||||||||| |||| Sbjct 44436 ACCAA-AAAGCCAAAGGTAAGTTTGAGGTCTATTACCTTATGTACCCAGAAGGGCAAGAT 44494 Query 27874 GCTGACGACTGCACTAAAGAAGAGCTTAACGAGGTAGACAAAAAT 27918 |||||||| | |||||||| || || | |||| || ||| Sbjct 44495 GCTGACGATTTGCGAAAAGAAGAACTCGACAAAGTAGCTAAGAAT 44539 Score = 181 bits (200), Expect = 3e-41 Identities = 217/288 (75%), Gaps = 5/288 (2%) Strand=Plus/Plus Query 10186 TTGAAAAACAAGAATATCCGTGACGCATTCCGTCAGAATAACACAGACGTTGCATTGCTT 10245 |||||| | || | || ||||| || |||||| |||| |||||||| ||||| ||| | Sbjct 26856 TTGAAACAAAAAGACATTCGTGATGCGTTCCGTGAGAACAACACAGATGTTGCTTTGTTA 26915 Query 10246 CGTGGATACATTGGCGACTTTATGGGTCTTAGC-TTTATTGTTGATTCTCACTTCCAAGA 10304 ||||| || ||||||||||| ||||| |||| | || || | ||| |||| || Sbjct 26916 CGTGGCTATATTGGCGACTTCATGGG-CTTATCGTTCATCGAGGATGAAAACTTTGCGGA 26974 Query 10305 GGACAACGCTTTAATCCTACAAAAGAAAGTAATCGGTGATATTGCTGATGCTGAGCCATT 10364 | ||| || || || | || || |||||||| |||||||| |||||| || Sbjct 26975 TGGTGACGTATTGTTCGTAGAGAAAAAGACTATCGGTGAAATTGCTGACGCTGAGGGCTT 27034 Query 10365 ACGCACATACACTTACAACGAGGAAAGCA-ACGAGCGTACTATTGTACGTGCAACTCGTT 10423 ||| || | |||||||||| ||||| | || ||||| ||||||||||||||||| | Sbjct 27035 ACGTACTAAGGTATACAACGAGG-AAGCAGAAGACCGTACGATTGTACGTGCAACTCGCT 27093 Query 10424 TCACTAACGCTTACTTAACAGACCCTAAAGCGGTTTACCTGATTAAAG 10471 |||| | |||||| |||||||||||||||||||||||||| |||||| Sbjct 27094 ACACTCAAGCTTACCTAACAGACCCTAAAGCGGTTTACCTG-TTAAAG 27140 Score = 138 bits (152), Expect = 4e-28 Identities = 401/612 (66%), Gaps = 14/612 (2%) Strand=Plus/Plus Query 26094 GTAGGTCAATCAGTTAAGAAGCTCGGTGAGGGTATCCGAGATAGGATGAAACAAAGGGCA 26153 |||| ||| |||||| ||||| || || ||||| |||| | | |||||| | || Sbjct 42514 GTAGCGCAAGGAGTTAAAAAGCTAGGGGAAGGTATTGGAGAGCGACTCAAACAACGAGCC 42573 Query 26154 ATGGCTCCCAAGGATGTAATAGGCATTAAAACTGGATGGGGAGCATTTGACTTAGCCGCA 26213 || || | || || ||||| | || || |||||| || || ||||||||| | Sbjct 42574 TTGAAGCCACAAGACGTTATAGGACTCAAGACAGGATGGCACGCTTTCGACTTAGCCTCT 42633 Query 26214 AGGGGTTTAGTTGACGGAGAGCTTACGGTCGTAGGAGCCAGACCAAAGGTCGGTAAATCT 26273 ||||||||| ||| ||| | || |||||||||| | | || |||||||| ||| Sbjct 42634 CAAGGTTTAGTTATCGGTGAGTTGACTATCGTAGGAGCTCGCTCCAAAGTCGGTAAGTCT 42693 Query 26274 ACAGTTTTACTTAATTGGTGCAAAAAGATATGTCTCGATGATGGTATTCCAGTTCTGTAT 26333 ||| ||||| || ||||| |||||||| ||| | || || || | || | | ||| Sbjct 42694 ACAACGTTACTAAACTGGTGTAAAAAGATTTGTGTTGACGACGGAGTACCTACTTTATAT 42753 Query 26334 ATCGACACTGAGAACTATTCCCATGAGCAGGAAGACAGATTACTCTCATTAATGTCTGGT 26393 ||||||||||||| || ||| ||||||||||| | |||| | || ||||| Sbjct 42754 ATCGACACTGAGATGTACGACCACGAGCAGGAAGATAAGCTACTGAGTATTATCTCTGGA 42813 Query 26394 GTTGACCATACAGAAATAGAAAACGGTCAATTCGCAAGGGATACGTTCAATGGTGATGCT 26453 || | || |||||| ||||||| | || || | ||||| ||| || Sbjct 42814 GTCCAGCACCATGAAATACGAAACGGTTACTTTGCTCGTAATACGGAGTTTGGAACTGGC 42873 Query 26454 AAAACGAAAATGAAAGCCGTGGCGGAAGCATCTAGGATTATCGAATCAGGTAACTTCCAT 26513 || ||| |||| || || ||||| || | |||| | || | ||| | Sbjct 42874 AAGGAGAAGGCTGAAGCGGTTGCAGAAGCTAGTAAGGCTATCTCAAAAGCTCCTTTCTAC 42933 Query 26514 CATATTTATTTACCATTCTTCACACCTGATAAGATTGAACACATCGTA---AGGGAGTAC 26570 || || ||| | ||| ||| || | |||| | || |||| || || || Sbjct 42934 CACATCTATATGCCAAACTTTACGTTAGCCGAGAT---AGCCAGCGTAATTAGAAAGCAC 42990 Query 26571 CAGATCAATCATGGTAT-CAGACTAGTGTGTTTTGATTATATCAAGTTACCA---TCGAG 26626 ||||| | || ||||| ||| || || |||||||| || ||| ||||| || | Sbjct 42991 CAGATAGAACACGGTATACAG-CTCGTAGTCTTTGATTACATTAAGCTACCAAGCTCAA- 43048 Query 26627 TGATAGCAAACTCGGGGATAAAGAGTGGCAACAACTAGGGTACCTGACAAGCAAACTTAA 26686 | || || | || || |||||||||||| || || ||||| ||||| ||| || Sbjct 43049 --ACAGTAACTTAGGAGACAAAGAGTGGCAAGCTCTTGGATACCTTACAAGTGGACTAAA 43106 Query 26687 AGACTTAGCAGG 26698 ||||||||| || Sbjct 43107 AGACTTAGCTGG 43118 Score = 114 bits (126), Expect = 4e-21 Identities = 268/398 (67%), Gaps = 6/398 (2%) Strand=Plus/Plus Query 42866 AAAGGCAAAAAGAGTGTTCAGGAAGCTAGTATAAAAGACCGCCACTTCGTTATCATTGAT 42925 || ||||| |||| || || || || | ||| | | || ||||| ||||| ||||| Sbjct 9791 AAGGGCAAGAAGAAAGTCCAAGATGCAAATATCTATAAGCGACACTTTGTTATTATTGAC 9850 Query 42926 GAGGTCGGGGAGCTTAACCCTTCCGAGGCTGTCTCAAAAGAAGAGCGCAAACTCAAAGAG 42985 ||||| || ||||| ||||| | || || | |||| ||| || ||||||||| Sbjct 9851 GAGGTAGGAGAGCTCAACCCAGCAGAAGCAACCGACAAAGCAGATAAGAAGCTCAAAGAG 9910 Query 42986 GAATGTCAGAAGTACATGTCTCAAATAGCACGCCTTGGAGCTGGATTGGGGTTCCGCCAA 43045 || |||||| |||||| ||||||||| |||||||| ||||| || || | | | | Sbjct 9911 GAGTGTCAGCGCTACATGAGTCAAATAGCTCGCCTTGGTGCTGGTTTAGGATATAGACTA 9970 Query 43046 GTATTAGCCACCCAGTACACCACAGGAGATGTCATTCCCCGTCAG-TGT-AAACAGAATA 43103 || |||| || |||||| | || || || || ||||| | || ||| || |||||| Sbjct 9971 ATAGTAGCTACACAGTACCCAACTGGGGACGTTATTCCTAG--AGCTGTCAAGCAGAATT 10028 Query 43104 GCGATGCCAAAGTGTGCTTTAGGGTTCAAAGCGAGGTAGCCAGCAGGGTTACCCTTGACA 43163 | || | || | |||||| | || | | || |||||| ||| ||||| Sbjct 10029 GTGACGTTAAGATATGCTTTCGAGTACGTAACGCTACAGCCAGTCAAGTTGTACTTGATG 10088 Query 43164 GCTCTGGAGCCGAGAAATTACCAGAAATAAGAGGGCGTGCTCTATATCAGACAGCAGACA 43223 ||||| || || | |||| || | ||| || ||| | || ||| |||| Sbjct 10089 AGGGAGGAGCTGAAAAGCTTCCAGCTATTAAAGGTCGAGCTATCGTACAATTAGCTGACA 10148 Query 43224 AGAGGAGAACTA-TCCAGACATACCTTATTAAGCCAGA 43260 || ||||| || |||||||||| ||||||| |||| Sbjct 10149 AG-CGAGAAATACTCCAGACATATTTTATTAACTCAGA 10185 Score = 84.2 bits (92), Expect = 7e-12 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 15777 CCGTTCTCCCCAGCTAAAGAAGGACCATTGAAAGACCTTGACAAATCAGGTGAGTCATTC 15836 || ||||| ||||| || |||| | | | ||||| |||||||| ||| |||||||| Sbjct 32580 CCATTCTCACCAGCCAAGAAAGGTGCTCTAAGCGACCTAGACAAATCTGGTAAGTCATTC 32639 Query 15837 TTCCCGACTTGGTACGAGGCGGCATTGAAAAAGGTTAGCCCGATGACTAAAGCAGTCGGA 15896 ||||| || ||||||||| | || | | | ||||| || ||||| | ||| |||| Sbjct 32640 TTCCCAACATGGTACGAGTCAGCTCTAACTCAAGTTAGACCAATGACGAGAGCTATCGGT 32699 Query 15897 GGAGCAATGAG 15907 ||||| ||||| Sbjct 32700 GGAGCTATGAG 32710 Score = 80.6 bits (88), Expect = 8e-11 Identities = 208/314 (66%), Gaps = 10/314 (3%) Strand=Plus/Plus Query 29749 GGCTCTGGAGCTGGCTCTCTTGTCGCTTACCTTCTGGATATCACAGAGGTTGACCCAATC 29808 ||||| | || |||||| || || |||||| | || ||||| || ||||||||||| || Sbjct 50960 GGCTCAGCAGGTGGCTCACTCGTAGCTTACTTACTTGATATTACGGAGGTTGACCCTATA 51019 Query 29809 AAACATGGTCTGTTCTTCGAGCGCTTCTTAGATATCACCAGACAGAAGATGCCCGATATT 29868 ||| ||| | | || ||||||||| |||| | || | |||| | || ||||| Sbjct 51020 CCACACGGTTTATATTTTGAGCGCTTCCTAGACGTTACTCGCTTGAAGTTTCCAGATATC 51079 Query 29869 GATACAGACATCCAGTCAGAGCGCCGCCACGAGTTGTTCACTTATCTTA-AAGAGAAGTA 29927 || ||||| || || | ||| ||| | ||| || | | || |||| ||||||| Sbjct 51080 GACACAGATATTGAGGACGTGCGACGCTATGAGCTGATTAAGTA-CTTACGTCAGAAGTA 51138 Query 29928 CGGATATAATCGAGTCGCTCAAGTGACGAAC----TATACAAAGATGTCTGCAAAATCAG 29983 ||| | | || |||||| | |||| | ||| ||| || || ||| Sbjct 51139 TGGAGCTGACAAGGTAGCTCAAATAGTGAACATGGTTTAC----ATGAACGCTAAGACAG 51194 Query 29984 CCTTCAAGAATGCATTGATGATTTATGATGTACCCTTTGGAAAGTCTCAAGAGATCACAA 30043 | | ||||||||| ||| | ||||| | || ||||| | || || |||| || | Sbjct 51195 CTTACAAGAATGCTCTGACAGTCTATGACATTCCGTTTGGCGACTCACAGAAGATTACTA 51254 Query 30044 ATTTGATCCCTGAC 30057 | |||| |||||| Sbjct 51255 ACATGATACCTGAC 51268 >seq222169 Length=327 Score = 140 bits (154), Expect = 1e-28 Identities = 133/170 (78%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 3237 ACAGCAGAAGAAATAAAGAAAATGCGTAACATTTTACGTGATCCAGTAGGCTTTACCGAG 3296 ||||||||| | | | || |||||||||||| | ||||| || ||||| || || ||| Sbjct 172 ACAGCAGAACAGCTCCACAAGATGCGTAACATTATGCGTGACCCTGTAGGATTCACTGAG 113 Query 3297 AAGACAGGAACCGTCAAGGGTAAACCCTTCAAGTTTGACCACCGAGAGCACTTATATGAT 3356 ||||| ||||| || ||||||||| |||||||||||||||| | |||||||| | ||| Sbjct 112 AAGACTGGAACTGTAAAGGGTAAAGACTTCAAGTTTGACCACAGGGAGCACTTGCACGAT 53 Query 3357 GTATACCGAGACAAACACCCTCGTATAGTCATCGTAGCGGGTCGTCAGGT 3406 || || ||||| |||||||| || ||||| ||||| || || || || Sbjct 52 GTCTATAGAGACCCTCACCCTCGAATTGTCATTGTAGCTGGACGACAAGT 3 >seq249645 Length=476466 Score = 84.2 bits (92), Expect = 7e-12 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 29743 GGTCGTGGCTCTGGAGCTGGCTCTCTTGTCGCTTACCTTCTGGATATCACAGAGGTTGAC 29802 |||||||||||||| |||||||| |||||||| || || | |||||||| ||||| Sbjct 144893 GGTCGTGGCTCTGGTGCTGGCTCGCTTGTCGCCTATGCGCTTAACATCACAGACCTTGAC 144952 Query 29803 CCAATCAAACATGGTCTGTTCTTCGAGCGCTTCTTA 29838 ||||| | ||| ||| || || |||||||||||| Sbjct 144953 CCAATTCATTATGATCTATTGTTTGAGCGCTTCTTA 144988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157536891609032