Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_020479.1
Length=49425
Score E
Sequences producing significant alignments: (Bits) Value
seq78791 562 1e-155
seq222169 140 1e-28
seq249645 84.2 7e-12
>seq78791
Length=51567
Score = 562 bits (622), Expect = 1e-155
Identities = 1096/1601 (68%), Gaps = 65/1601 (4%)
Strand=Plus/Plus
Query 3238 CAGCAGAAGAAATAAAGAAAATGCGTAACATTTTACGTGATCCAGTAGGCTTTACCGAGA 3297
||||||| || | ||||| ||||| ||| || | | || || | || || || ||||
Sbjct 19713 CAGCAGAGCAACTCAAGAAGATGCGGAACGTTATGAGAGACCCTATCGGATTCACTGAGA 19772
Query 3298 AGACAGGAACCGTCAAGGGTAAACCCTTCAAGTTTGACCACCGAGAGCACTTATATGATG 3357
||| || || |||||||||||| | |||||||| |||||||||| |||||| | || |
Sbjct 19773 CGACTGGGACTGTCAAGGGTAAAGCTTTCAAGTTCGACCACCGAGGTCACTTACACGAGG 19832
Query 3358 TATACCGAGACAAACACCCTCGTATAGTCATCGTAGCGGGTCGTCAGGTTGAGAAATCCG 3417
| ||| ||||| |||||| | | ||||| ||||| || || || || ||||| || |
Sbjct 19833 TCTACAGAGACCCTCACCCTAGAGTTGTCATAGTAGCTGGACGACAAGTAGAGAAGTCTG 19892
Query 3418 AGACAGTTAACCGTCTTATCCTCTTCCATGGATACACGAGACCGCACACAACCATTACAT 3477
|||| ||||||||| | | |||| ||| |||||| | || | || || || ||||| |
Sbjct 19893 AGACGGTTAACCGTTTGCTACTCTACCACGGATACCAGCGAGCCCATACTACGATTACCT 19952
Query 3478 ACACGGCACCTCGTAACGAACAGACAACCCGTTTTGTCAACGACCGTTTCAGAAAGTCCA 3537
|||| || || ||||| || || ||||| ||||| ||||||||||| || |||||||| |
Sbjct 19953 ACACAGCTCCACGTAATGAGCAAACAACACGTTTCGTCAACGACCGCTTTAGAAAGTCTA 20012
Query 3538 TTGCAACATCGAATGGA-GCAGTTCTT----GAAGGAGATGTCAACAAAAACCGAGATGC 3592
| ||| |||| | |||| ||| ||| || || |||| || || || ||
Sbjct 20013 T----ACAG-GAATCTAAGCAGGGCTTACTCGAAAGAATGGTAGACAAGAAGCGTGACGC 20067
Query 3593 AAAGACGGCTATCGGGCTAAAAAACAATACAACGTACTATTTTGGTTCATCATGGGCTGA 3652
||||| ||||| || |||| ||| |||| |||||||||||| ||| | ||||||||
Sbjct 20068 TAAGACAGCTATTGGACTAATTAACTCTACAGTGTACTATTTTGGCTCAGCGTGGGCTGA 20127
Query 3653 TGGAGATGCTCTCCGTGGTATCTCTGGTGATATGGTATTCTTTGATGAGGTTCAGGACAT 3712
|||||||||||||||||||| |||| ||||| || | || |||||||| ||||| ||
Sbjct 20128 CGGAGATGCTCTCCGTGGTATTGCTGGCGATATAGTTATGTTCGATGAGGTACAGGATAT 20187
Query 3713 TGGGCAGACAGCTATTGAGTCAATTGAAAAGAGTATATCCCACTCAGAGATACAGGATGC 3772
| ||||||||||| ||||||||||| ||| | | || || ||||| | || |
Sbjct 20188 TACACAGACAGCTATCGAGTCAATTGAGAAGTCTGTCTCACATAGCGAGATTAAAGACCC 20247
Query 3773 GGTAACTGAGATAAACGGACGGTGCTTCTACACAGGAACACCAAAACAGAAGGGCTCCTA 3832
|| |||||| | || || ||| ||||||||||| || ||||||||||| ||||| ||
Sbjct 20248 TGTTACTGAGCTGAATGGTAAGTGTTTCTACACAGGTACGCCAAAACAGAAAGGCTCTTA 20307
Query 3833 TTACGACAAAGTCCTCTGGGGTAACTCTGATCAGAAGAAATGGTCAGTATGCTGTGAGCA 3892
|||||| ||| |||||||| | ||| | |||||||||||| || | ||| |
Sbjct 20308 CTACGACCGAGTACTCTGGGGACAATCTAACCAGAAGAAATGG--AGCGTTGAGTGCTC- 20364
Query 3893 ATGCGGTCATGATCAATTCCTATCAATGAAAAACGTCATGGTTCAAAACGAAGGAGAAGA 3952
|| ||||| | ||||| | | ||||||||||| |||||| || || ||| ||
Sbjct 20365 TTGTGGTCACCACCAATTTATGACTATGAAAAACGTAATGGTTATGAATGAGGGAACTGA 20424
Query 3953 AAACGAGCGGAGATACTTTGGGTGCCTTGAGTGTGAAGCAGAATTGAACCGTGAGAATGG 4012
| ||||| | |||||||| || || ||||||| | || || |||||||| |||
Sbjct 20425 CGAGGAGCGTCGCTACTTTGGCTGTCTGGAGTGTGGCGAGGAGTTAGACCGTGAGCGTGG 20484
Query 4013 GCGCTGGATCAAAACACGACCAAACAACAAGCGTTACAGCGGGTACCTGTTCAACCAGCT 4072
||| | ||| ||| | |||||| ||||| || ||| |||||||||||||
Sbjct 20485 CTCGTGGGTAGTAACGAAACCTCATAACAAGATGTACAGTGGCTACTTGTTCAACCAGCT 20544
Query 4073 CAATATGGCATGGATCAGTGCCAATCAAATCTGGCACGATTATAACAACATGGATGACAT 4132
|||||| | ||||| ||||| || |||||||||| || | || | ||||| |||
Sbjct 20545 TAATATGACTTGGATTAGTGCAAACCAAATCTGGCGTGACTTTACGACTATGGACTCCAT 20604
Query 4133 GACCTTCCACAACGAGGTGCTAGGAGAATTCTACTCGGGGGATGAACAGCCACTTTCTTA 4192
||| |||||||||||||| || ||||| || || || ||||| || ||| | |
Sbjct 20605 GACATTCCACAACGAGGTACTGGGAGAGTTTTATAGCGGAGATGAGCAACCAGTAACCCT 20664
Query 4193 TGAGGACGTACTGGCATGTACAGATAAGA-GCTTGTCCTTACAAAGTAAATGTGATATCC 4251
|||||| ||||| || ||| || | |||| |||| | || | ||| | |
Sbjct 20665 TGAGGATGTACTAGCTTGTTGTGACCGCACGCTT-AGCTTAAAGAGACGCTCTGACACGC 20723
Query 4252 CAACCGTCATGGGTATTGACTATGGCTCTGGTGGACAATCCAAGACGATCATTACAATTG 4311
|||| || ||||| ||||||||||| |||| | | || || || || ||||| ||||
Sbjct 20724 CAACTGTAATGGGGATTGACTATGGTAGTGGTAGTAAGTCTAAAACAATTATTACTATTG 20783
Query 4312 GTCACGAAACAATGCACAAAGGCAAGAAAAAGCTCCTAATCGTCCACATGGAGAGCGCTC 4371
|| || || | || ||||| | || | |||||| ||||||
Sbjct 20784 GT------------CATAATTGGGAGGGTAAGCTTGTGATTGACCACATTGAGAGC-TGG 20830
Query 4372 CTAACATGGATACAGACGA-GCGTATTGCTTATAT---CAACTCTTTG-----------A 4416
||| || |||| |||| | | | | | || |||||| ||| |
Sbjct 20831 CTACCA--GATAAAGACAACCCAGACAACCAACATGACCAACTCATTGAGTATCTGTGCA 20888
Query 4417 AGC------ACAGATATAACGTCCAGAAGATTAATGGTGATATTGGGTATGGTCAATATG 4470
||| || || ||||| |||| || ||||| || || || ||| || |
Sbjct 20889 AGCTACAAGCCATCTACAACGTTGAGAAAATAGTCGGTGACATCGGTTACGGTTCTTACG 20948
Query 4471 AG--GGGGAATCCTTCTATGCCATGTACGGAAGAGAAGCCATCTCTACAAGATACGTAAC 4528
|| ||| | | |||| ||| || || || | || ||||| |||||||| ||
Sbjct 20949 AGTCTCAGAAGC--TATATGGCATCTATGGTAGGAACGCTATCTCATGTAGATACGTTAC 21006
Query 4529 CTACCAGACTAACCCTAAAAAGCGTGA-AATAAAAGA-TAAATTCGTC----CTACAAGT 4582
|| || | |||| || ||||| ||||| || | ||| || ||||| ||
Sbjct 21007 GTATGCGAATGACCCACGGAAACGTGAGTATAAAGGATTCAATAACTCAACTCTACAGGT 21066
Query 4583 AGACAGAACGTTCTCAATGGATTCACTTA-TCATGGCTTTCAAGCGTGGAGAGATCGTCA 4641
|||| | || |||||||||||| |||| | || || || || | | || || |
Sbjct 21067 AGACCGTACTTTCTCAATGGATAAGCTTATTGATATGTTCCATAAGTCTA-ACATAGTTA 21125
Query 4642 TCCCTTACAGTGACCCAGATAAGGTAGAAATGTTCTTTGACCACTATACAGCCATTGAGG 4701
| || |||| | ||||| |||| || |||||||||||||| ||||| |||||
Sbjct 21126 TTCCGTACAAGCAACCAGAGGAGGTTGAGTACTTCTTTGACCACTACACAGCTATTGAAA 21185
Query 4702 CGGTCTTCTCAGAGTC-AACTCAAGGTACTGGACGCAAGAGATACGACCACAGAACGCCA 4760
| | ||| | ||||| ||| | || || |||| || |||||| | || |||
Sbjct 21186 TGATATTCACCGAGTCGAACAC-TTCCACAGGTGTTAAGAAGTATGACCACCGTACTCCA 21244
Query 4761 GACGATGCATTCCACTCCCTGAACTATGTCCGTGAGGGCAT 4801
||||||||||||||| | ||||||| || | ||||| ||
Sbjct 21245 GACGATGCATTCCACAGCTTGAACTACGTTAGAGAGGGTAT 21285
Score = 407 bits (450), Expect = 5e-109
Identities = 735/1062 (69%), Gaps = 17/1062 (2%)
Strand=Plus/Plus
Query 5118 GAGCGTCCAGACCAAGAGGACTTTAACCCCTCAGACTTTTCCCTTGAAGTATACGACAAG 5177
|||||||||||||| ||||||||||||||||||||| ||||||||||| |||||
Sbjct 21605 GAGCGTCCAGACCAGTTAGACTTTAACCCCTCAGACTTTGACCTTGAAGTATGGGACAAA 21664
Query 5178 ATGATGACAGATGGTCAAGTTAAGTCCGCCCTTGATATGATCAAGCTATCAGCAACCGCA 5237
|||||||| || || || ||||| | | | | |||||||| |||||||| | ||
Sbjct 21665 ATGATGACCGACGGACAGGTTAAAGCTGGCTTAGATATGATTAAGCTATCTTGCTCGGCT 21724
Query 5238 AAAGGATTCACCGTAACAGGTGACGACGAGGAGTCAAAAAAGTATGCTGACTTCATCAAT 5297
|| ||||| | |||||||||||||||||| | |||||||||||||| || ||
Sbjct 21725 CGTGGCTTCACTATTACAGGTGACGACGAGGAGACTAAAAAGTATGCTGAGTTTATTTCA 21784
Query 5298 GAGAACTTTGAAATGATCCGAGGAAACATGGAAGATGTACTCAAAGAGATCATGACAGCC 5357
| |||||||| ||| || || |||||||| || ||| | ||||| | ||||
Sbjct 21785 TATAACTTTGAGTCGATTCGTGGCAACATGGAGGACGTAATTGGTGAGATGCTTTCAGCT 21844
Query 5358 CTTGAGTATGGCTATAGCTGTACAGAGAAGGTCTTCGAGTA---TAAAAATGGCAAGATC 5414
|| ||||||||||| ||| || ||||| || ||||| |||| || | |||||
Sbjct 21845 CTAGAGTATGGCTACTCAGTTACGGAAAAGGTATTTGAGTACGATAAAGATAGAAAGATA 21904
Query 5415 ATGCTCAAGAAGCTGAAAACACTTGACCCTTATAGTGTGGCAGGCAAGACGGATCGTTTT 5474
| | |||||||| ||||| || ||||| | | | | |||| || |||
Sbjct 21905 GTTTTAAAGAAGCTTAAAACGCTAGACCCACACAAGTTAACTTTAAAGATTGACAAGTTT 21964
Query 5475 GGCGACCTCATGTATGTTAAACAACGCATCGGA-AGCAAAACAATCAAAATACCTGCTGA 5533
|| || | ||||||| || || || |||| | | | | | |||| |||
Sbjct 21965 GGTGATTTAGTGTATGTACGTCAGTCGATTGGTCAGCACGAGATTGATA-TACCAGCTAG 22023
Query 5534 TAAAGTCTTATGGTATGCC--CATCAAAAACGCTTTGGTAATATCTACGGTCAATCCAGA 5591
||| || || ||| | ||| | || |||||||| || | |||||||| ||
Sbjct 22024 TAATGTG--ATTCTATACAGTCATGACAAGCGCTTTGGCAACCTTTACGGTCAGTCAGCT 22081
Query 5592 CTAAGAACGGTGTACAAGCACTGGTTCATCAAAGATAAAATGTACAGATTCGCCAACATT 5651
|| ||||| || |||||||||||| |||| || ||||| ||||||||||||| ||||||
Sbjct 22082 CTGAGAACAGTCTACAAGCACTGGCTCATTAAGGATAAGCTGTACAGATTCGCTAACATT 22141
Query 5652 GCTTATGAGCGCTATGGTACACCCCTTTTAGTTGGATCAGTAGAGGACAAAAATGATGTA 5711
|| || ||||| ||||| ||||| || ||||| || |||| ||||| || |||||
Sbjct 22142 GCCTACGAGCGTTATGGAACACCGCTATTAGTCGGTAAAGTACAGGACGCTAACGATGTT 22201
Query 5712 CCTGAGATCACACGCCTTTTGAGAAACATCAATGGTATGACTGGACTAGGACTATCTGGC 5771
| || | | || |||||| || || | |||||| || | |||||
Sbjct 22202 GACAAAATGAATAGTCTATTGAGACGGATTAACAGCATGACTTCTCTGTCCATCTCTGGT 22261
Query 5772 GGAGCTGATGTAAAAGCTATTCAGACAACTAACGCAGACTTCATTGGATACATTGAGCAC 5831
|| || || ||||||||||| | | |||||| ||||||||||| ||||||||||||
Sbjct 22262 CAAGACGACGTGAAAGCTATTCAAATGAGTAACGCTGACTTCATTGGTTACATTGAGCAC 22321
Query 5832 CACGACCGCAAGATCATGGAATCACTCCTTGTACCGCCATCCCTTCTAGGATTATC--TC 5889
|| ||||||||||| ||||| | | || || || || | || || |||| ||
Sbjct 22322 CATGACCGCAAGATTATGGAGGCTATGCTAGTTCCACCTATGTTGCTTGG--TATCGGTC 22379
Query 5890 GTGGTCAATCTGGCTCTTATGCGCTGTCTTCAAACCAATTTGACATCTTTATGATCCACC 5949
| || || |||||||| || || || || ||||| |||||| | || |||| ||
Sbjct 22380 GAGGACAGTCTGGCTCATACGCTCTTACTAATAACCAGTTTGACGTATTCATGA-GCAGA 22438
Query 5950 TTGAAAGTATT-CAGCGTGACATCAAATCACTTATCGAGGAAGAAATAATCAGACCATTG 6008
|| ||| || ||||||||| | || | ||||| ||||| ||| | || |||||| |
Sbjct 22439 TTAGAAGCGTTACAGCGTGACTTGAAGGCGCTTATTGAGGAGGAAGTCATTAGACCACTA 22498
Query 6009 GTTGATCTGAACTTCCCTAACGTTACAAGGTACCCTTCGTTCACATTCAAGCCTTTAGCA 6068
| || | ||||| |||||||||| | |||||||| ||| |||| || | ||
Sbjct 22499 ATCGACTTAAACTTTCCTAACGTTAAGAAATACCCTTCATTCCAATTCCGTCCACTTGC- 22557
Query 6069 GATCGA-GACATCGACAAGCTGTCAAGTGTATTTGAGAAGTTGATCAACGCTTCTGTCAT 6127
| ||| ||||| | ||||| | | ||||| | || |||| | ||| || ||
Sbjct 22558 TAACGAGGACATTCAAAAGCTTGCTAACGTATTCATGCAGATGATTACAGCTGGAGTTAT 22617
Query 6128 TGCCCCTGAGGAAGACTGGTTACGTGAAGAGCTTGGCTTCCC 6169
|| || ||||| ||||||||||| || |||||||||||
Sbjct 22618 TGATGCTAGTGAAGATTGGTTACGTGAGGAACTTGGCTTCCC 22659
Score = 304 bits (336), Expect = 4e-78
Identities = 413/568 (73%), Gaps = 16/568 (3%)
Strand=Plus/Plus
Query 30511 GGAATGCGTGACTTGTGTAAACAAGTTCAACCTACTGAGTTTAAACACATTGTAGCGATC 30570
||||||| | || |||||| || || |||||| ||||| | || | ||||||||
Sbjct 200 GGAATGCAACAATTATGTAAAGCTGTACAGCCTACTAAGTTTGAGCATCTCGTAGCGATT 259
Query 30571 AACGCTTTGTACCGTCCACCAGCTTTAGCCTCTGGAGATACTTGGAGATATGCCAATATC 30630
| || |||||| | |||||||| ||||| |||||| ||||||||||| || | ||
Sbjct 260 ACAGCATTGTACAGACCACCAGCATTAGCTAGTGGAGACACTTGGAGATACGCTGACATT 319
Query 30631 AAGAATGGCAGAGAGGAAGAGCGATACAGCCACCCAGAGGAAAAACAAATCACAGGTGAG 30690
|||||||| | || || |||| |||||||||||||| || || | || |||||||||
Sbjct 320 AAGAATGGTAAAGCTGAGGAGCATTACAGCCACCCAGACGAGAAGCGCATAACAGGTGAG 379
Query 30691 ACTTACGGGGTTATCACTTATCAGGAACACGTTATGCAACTTGTACA-TCATTTTGCTGG 30749
|| | || || || || | || || ||||||||| | ||||||| ||| ||||||||
Sbjct 380 ACCTTTGGAGTCATTACCTTCCAAGAGCACGTTATGGAGATTGTACACTCA-TTTGCTGG 438
Query 30750 ATGGGATTACGGACGAGGTGACAAGCTCCGTAAGATGAGTGCAGAACAACTTGAAGAACT 30809
|||||||| |||||||| ||||| || |||||| ||||| || ||||||||| ||
Sbjct 439 TTGGGATTATGGACGAGGCGACAAACTACGTAAGGCTAGTGCTGAGGAACTTGAAG--CT 496
Query 30810 AAGAG--CAGAATTTATCTGGGACTCTGTTTCGAACTTCGATTATGATCAAGACAACGTT 30867
| | | |||| ||||| ||| || ||| | | | || ||||||
Sbjct 497 ATGCGCTCAGAGTTTATTGAGGATGCTTGCAAGAAGTACTCACACGA--CGCACAACGAA 554
Query 30868 GAGTTTATAG--CTCAGATGGGTGACTTATGGGATCGTATTGTCCAGTACATGGGTTACG 30925
|| || | | ||||||||| ||| | ||| ||||||||| ||||||||||||||||
Sbjct 555 CAGCTTTTCGCTCTCAGATGGATGAGCTTTGGAGTCGTATTGTACAGTACATGGGTTACG 614
Query 30926 GATTCAATAAGTCCCACGGAGTAGCTTACTCTATGTTGACATACCTCACGGTATTTCTGG 30985
| ||||||||||||||||||||||||||| ||||| | || || | || | || || |
Sbjct 615 GTTTCAATAAGTCCCACGGAGTAGCTTACACTATGATTACTTATATGACAGCATGGCTAG 674
Query 30986 AGCATTACTATCCAGAGCACTACATGTCAGCGATACTCACGAG---TAAAATGTCAGACC 31042
|||| ||| |||||||||| | ||| ||| | ||| |||||||||||||
Sbjct 675 AGCACCACTTCCCAGAGCACT---TCCAAGCCTCACTAATGAGTACTAAAATGTCAGACA 731
Query 31043 AAGAGACATTGGCTAAAGTGTTCCAAGA 31070
|||| | | | ||| || | ||||||||
Sbjct 732 AAGACAAAATAGCTCAAATATTCCAAGA 759
Score = 253 bits (280), Expect = 6e-63
Identities = 447/645 (69%), Gaps = 10/645 (2%)
Strand=Plus/Plus
Query 27279 AGAAGAGGCAAGAAAGTTCATTGAAAGAATGATGAGAAAGCAAGACAAAAAGGAG---CT 27335
||| ||||| ||||||| || ||| ||||| || ||| | ||||| || | ||
Sbjct 43900 AGACGAGGCTCGAAAGTTTATCGAACAAATGAGGA---AGCGACACAAACAGCACACTCT 43956
Query 27336 CCCTACGTTTAAGATGCCAAGAATGAAACTAGCAAAGGTTAGCTCCTACAGAGGATACTC 27395
|| | || ||||| | || ||||| | || || || | | ||| ||||| |||||
Sbjct 43957 ACCAGCTTTCAAGATTCAAAATATGAAGTTTGCTAAAGTGAACGACTATAGAGGTTACTC 44016
Query 27396 ACCAGAGACCATT-ACACATTGGAAGTTCTTCCTTGCTAAAGATGGAGAGCTACAAGACA 27454
|| ||| | || || | | || | | |||| | ||| || || || ||||||
Sbjct 44017 ACAAGAAGCGCTTGACTGGTGGAAAATACGATATTGC-ACAGAAGGCGAACTCAAAGACA 44075
Query 27455 GAATCATTATTCCCTTCGAGGATGTAGATAACCGCCTTGTTGGTATAACTGGCAGGGCAA 27514
|||| | || | | || |||||||| || | ||||| || |||||||| || ||||
Sbjct 44076 GAATAGTCATGGCTCTGGAAGATGTAGACAAAAGACTTGTAGGCATAACTGGGAGAGCAA 44135
Query 27515 CCAAAGCAGATCAACCAGAAAAGTTCATGCACCGACCAAGAAACCTGCACACAGGGTTTT 27574
|||||||||| ||| |||||||||||||| || || |||||| | ||||| || | |
Sbjct 44136 CCAAAGCAGAACAAGTGGAAAAGTTCATGCATCGTCCTAGAAACTTACACACTGGTTACT 44195
Query 27575 TCCTCACAGGGCTGGGAAGGAACAAGAAGTTCCTCGAAGAGTACGGCTACACGGTTAAAA 27634
| ||||||||||| || || ||| ||| | || |||| | |||| ||||| |
Sbjct 44196 TTCTCACAGGGCTTGGTAGAAACTTGAAATATGTCCAAGAAGCAAACAACACAGTTAAGA 44255
Query 27635 TCGTTGAGGGTGTCTTTGATTGTGCTCGGTGGTATGACTCAGGACATAAAAACGTTTGCG 27694
| || ||||| | |||||||||||||| |||| ||||| || |||||||| || |||
Sbjct 44256 TTGTAGAGGGGCTTTTTGATTGTGCTCGCTGGTGGGACTCTGGTCATAAAAATGTATGCT 44315
Query 27695 CCCCTATTGGTGTATTCTTCACAGAAGAGCATATTGACCAGCTTTACAAAGCAGGGGTAA 27754
|| ||||| || |||||||| || |||||||| || || || || ||||| ||||
Sbjct 44316 GTCCAATTGGAGTGTTCTTCACCGAGGAGCATATCTTACAACTCTATAAGGCAGGTGTAA 44375
Query 27755 TTGGTATCGACCTCGGTTTTGATAACGATCCAGCAGGAAGAAACGGAATCAGGAGAGC-T 27813
| | || |||||||||| || ||| |||||| | |||||| | | | || |
Sbjct 44376 CAACTCTTGAAATCGGTTTTGACAATGATAAAGCAGGTCGTAACGGATTTCGTAAGGCGT 44435
Query 27814 ATCAAGAGAGCCAAGTACAAGTTCGATATTCATGTGCTTGTTTACCCAGAAGGTAAAGAC 27873
| ||| | |||||| ||||| || | || ||| | ||||||||||| ||||
Sbjct 44436 ACCAA-AAAGCCAAAGGTAAGTTTGAGGTCTATTACCTTATGTACCCAGAAGGGCAAGAT 44494
Query 27874 GCTGACGACTGCACTAAAGAAGAGCTTAACGAGGTAGACAAAAAT 27918
|||||||| | |||||||| || || | |||| || |||
Sbjct 44495 GCTGACGATTTGCGAAAAGAAGAACTCGACAAAGTAGCTAAGAAT 44539
Score = 181 bits (200), Expect = 3e-41
Identities = 217/288 (75%), Gaps = 5/288 (2%)
Strand=Plus/Plus
Query 10186 TTGAAAAACAAGAATATCCGTGACGCATTCCGTCAGAATAACACAGACGTTGCATTGCTT 10245
|||||| | || | || ||||| || |||||| |||| |||||||| ||||| ||| |
Sbjct 26856 TTGAAACAAAAAGACATTCGTGATGCGTTCCGTGAGAACAACACAGATGTTGCTTTGTTA 26915
Query 10246 CGTGGATACATTGGCGACTTTATGGGTCTTAGC-TTTATTGTTGATTCTCACTTCCAAGA 10304
||||| || ||||||||||| ||||| |||| | || || | ||| |||| ||
Sbjct 26916 CGTGGCTATATTGGCGACTTCATGGG-CTTATCGTTCATCGAGGATGAAAACTTTGCGGA 26974
Query 10305 GGACAACGCTTTAATCCTACAAAAGAAAGTAATCGGTGATATTGCTGATGCTGAGCCATT 10364
| ||| || || || | || || |||||||| |||||||| |||||| ||
Sbjct 26975 TGGTGACGTATTGTTCGTAGAGAAAAAGACTATCGGTGAAATTGCTGACGCTGAGGGCTT 27034
Query 10365 ACGCACATACACTTACAACGAGGAAAGCA-ACGAGCGTACTATTGTACGTGCAACTCGTT 10423
||| || | |||||||||| ||||| | || ||||| ||||||||||||||||| |
Sbjct 27035 ACGTACTAAGGTATACAACGAGG-AAGCAGAAGACCGTACGATTGTACGTGCAACTCGCT 27093
Query 10424 TCACTAACGCTTACTTAACAGACCCTAAAGCGGTTTACCTGATTAAAG 10471
|||| | |||||| |||||||||||||||||||||||||| ||||||
Sbjct 27094 ACACTCAAGCTTACCTAACAGACCCTAAAGCGGTTTACCTG-TTAAAG 27140
Score = 138 bits (152), Expect = 4e-28
Identities = 401/612 (66%), Gaps = 14/612 (2%)
Strand=Plus/Plus
Query 26094 GTAGGTCAATCAGTTAAGAAGCTCGGTGAGGGTATCCGAGATAGGATGAAACAAAGGGCA 26153
|||| ||| |||||| ||||| || || ||||| |||| | | |||||| | ||
Sbjct 42514 GTAGCGCAAGGAGTTAAAAAGCTAGGGGAAGGTATTGGAGAGCGACTCAAACAACGAGCC 42573
Query 26154 ATGGCTCCCAAGGATGTAATAGGCATTAAAACTGGATGGGGAGCATTTGACTTAGCCGCA 26213
|| || | || || ||||| | || || |||||| || || ||||||||| |
Sbjct 42574 TTGAAGCCACAAGACGTTATAGGACTCAAGACAGGATGGCACGCTTTCGACTTAGCCTCT 42633
Query 26214 AGGGGTTTAGTTGACGGAGAGCTTACGGTCGTAGGAGCCAGACCAAAGGTCGGTAAATCT 26273
||||||||| ||| ||| | || |||||||||| | | || |||||||| |||
Sbjct 42634 CAAGGTTTAGTTATCGGTGAGTTGACTATCGTAGGAGCTCGCTCCAAAGTCGGTAAGTCT 42693
Query 26274 ACAGTTTTACTTAATTGGTGCAAAAAGATATGTCTCGATGATGGTATTCCAGTTCTGTAT 26333
||| ||||| || ||||| |||||||| ||| | || || || | || | | |||
Sbjct 42694 ACAACGTTACTAAACTGGTGTAAAAAGATTTGTGTTGACGACGGAGTACCTACTTTATAT 42753
Query 26334 ATCGACACTGAGAACTATTCCCATGAGCAGGAAGACAGATTACTCTCATTAATGTCTGGT 26393
||||||||||||| || ||| ||||||||||| | |||| | || |||||
Sbjct 42754 ATCGACACTGAGATGTACGACCACGAGCAGGAAGATAAGCTACTGAGTATTATCTCTGGA 42813
Query 26394 GTTGACCATACAGAAATAGAAAACGGTCAATTCGCAAGGGATACGTTCAATGGTGATGCT 26453
|| | || |||||| ||||||| | || || | ||||| ||| ||
Sbjct 42814 GTCCAGCACCATGAAATACGAAACGGTTACTTTGCTCGTAATACGGAGTTTGGAACTGGC 42873
Query 26454 AAAACGAAAATGAAAGCCGTGGCGGAAGCATCTAGGATTATCGAATCAGGTAACTTCCAT 26513
|| ||| |||| || || ||||| || | |||| | || | ||| |
Sbjct 42874 AAGGAGAAGGCTGAAGCGGTTGCAGAAGCTAGTAAGGCTATCTCAAAAGCTCCTTTCTAC 42933
Query 26514 CATATTTATTTACCATTCTTCACACCTGATAAGATTGAACACATCGTA---AGGGAGTAC 26570
|| || ||| | ||| ||| || | |||| | || |||| || || ||
Sbjct 42934 CACATCTATATGCCAAACTTTACGTTAGCCGAGAT---AGCCAGCGTAATTAGAAAGCAC 42990
Query 26571 CAGATCAATCATGGTAT-CAGACTAGTGTGTTTTGATTATATCAAGTTACCA---TCGAG 26626
||||| | || ||||| ||| || || |||||||| || ||| ||||| || |
Sbjct 42991 CAGATAGAACACGGTATACAG-CTCGTAGTCTTTGATTACATTAAGCTACCAAGCTCAA- 43048
Query 26627 TGATAGCAAACTCGGGGATAAAGAGTGGCAACAACTAGGGTACCTGACAAGCAAACTTAA 26686
| || || | || || |||||||||||| || || ||||| ||||| ||| ||
Sbjct 43049 --ACAGTAACTTAGGAGACAAAGAGTGGCAAGCTCTTGGATACCTTACAAGTGGACTAAA 43106
Query 26687 AGACTTAGCAGG 26698
||||||||| ||
Sbjct 43107 AGACTTAGCTGG 43118
Score = 114 bits (126), Expect = 4e-21
Identities = 268/398 (67%), Gaps = 6/398 (2%)
Strand=Plus/Plus
Query 42866 AAAGGCAAAAAGAGTGTTCAGGAAGCTAGTATAAAAGACCGCCACTTCGTTATCATTGAT 42925
|| ||||| |||| || || || || | ||| | | || ||||| ||||| |||||
Sbjct 9791 AAGGGCAAGAAGAAAGTCCAAGATGCAAATATCTATAAGCGACACTTTGTTATTATTGAC 9850
Query 42926 GAGGTCGGGGAGCTTAACCCTTCCGAGGCTGTCTCAAAAGAAGAGCGCAAACTCAAAGAG 42985
||||| || ||||| ||||| | || || | |||| ||| || |||||||||
Sbjct 9851 GAGGTAGGAGAGCTCAACCCAGCAGAAGCAACCGACAAAGCAGATAAGAAGCTCAAAGAG 9910
Query 42986 GAATGTCAGAAGTACATGTCTCAAATAGCACGCCTTGGAGCTGGATTGGGGTTCCGCCAA 43045
|| |||||| |||||| ||||||||| |||||||| ||||| || || | | | |
Sbjct 9911 GAGTGTCAGCGCTACATGAGTCAAATAGCTCGCCTTGGTGCTGGTTTAGGATATAGACTA 9970
Query 43046 GTATTAGCCACCCAGTACACCACAGGAGATGTCATTCCCCGTCAG-TGT-AAACAGAATA 43103
|| |||| || |||||| | || || || || ||||| | || ||| || ||||||
Sbjct 9971 ATAGTAGCTACACAGTACCCAACTGGGGACGTTATTCCTAG--AGCTGTCAAGCAGAATT 10028
Query 43104 GCGATGCCAAAGTGTGCTTTAGGGTTCAAAGCGAGGTAGCCAGCAGGGTTACCCTTGACA 43163
| || | || | |||||| | || | | || |||||| ||| |||||
Sbjct 10029 GTGACGTTAAGATATGCTTTCGAGTACGTAACGCTACAGCCAGTCAAGTTGTACTTGATG 10088
Query 43164 GCTCTGGAGCCGAGAAATTACCAGAAATAAGAGGGCGTGCTCTATATCAGACAGCAGACA 43223
||||| || || | |||| || | ||| || ||| | || ||| ||||
Sbjct 10089 AGGGAGGAGCTGAAAAGCTTCCAGCTATTAAAGGTCGAGCTATCGTACAATTAGCTGACA 10148
Query 43224 AGAGGAGAACTA-TCCAGACATACCTTATTAAGCCAGA 43260
|| ||||| || |||||||||| ||||||| ||||
Sbjct 10149 AG-CGAGAAATACTCCAGACATATTTTATTAACTCAGA 10185
Score = 84.2 bits (92), Expect = 7e-12
Identities = 97/131 (74%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 15777 CCGTTCTCCCCAGCTAAAGAAGGACCATTGAAAGACCTTGACAAATCAGGTGAGTCATTC 15836
|| ||||| ||||| || |||| | | | ||||| |||||||| ||| ||||||||
Sbjct 32580 CCATTCTCACCAGCCAAGAAAGGTGCTCTAAGCGACCTAGACAAATCTGGTAAGTCATTC 32639
Query 15837 TTCCCGACTTGGTACGAGGCGGCATTGAAAAAGGTTAGCCCGATGACTAAAGCAGTCGGA 15896
||||| || ||||||||| | || | | | ||||| || ||||| | ||| ||||
Sbjct 32640 TTCCCAACATGGTACGAGTCAGCTCTAACTCAAGTTAGACCAATGACGAGAGCTATCGGT 32699
Query 15897 GGAGCAATGAG 15907
||||| |||||
Sbjct 32700 GGAGCTATGAG 32710
Score = 80.6 bits (88), Expect = 8e-11
Identities = 208/314 (66%), Gaps = 10/314 (3%)
Strand=Plus/Plus
Query 29749 GGCTCTGGAGCTGGCTCTCTTGTCGCTTACCTTCTGGATATCACAGAGGTTGACCCAATC 29808
||||| | || |||||| || || |||||| | || ||||| || ||||||||||| ||
Sbjct 50960 GGCTCAGCAGGTGGCTCACTCGTAGCTTACTTACTTGATATTACGGAGGTTGACCCTATA 51019
Query 29809 AAACATGGTCTGTTCTTCGAGCGCTTCTTAGATATCACCAGACAGAAGATGCCCGATATT 29868
||| ||| | | || ||||||||| |||| | || | |||| | || |||||
Sbjct 51020 CCACACGGTTTATATTTTGAGCGCTTCCTAGACGTTACTCGCTTGAAGTTTCCAGATATC 51079
Query 29869 GATACAGACATCCAGTCAGAGCGCCGCCACGAGTTGTTCACTTATCTTA-AAGAGAAGTA 29927
|| ||||| || || | ||| ||| | ||| || | | || |||| |||||||
Sbjct 51080 GACACAGATATTGAGGACGTGCGACGCTATGAGCTGATTAAGTA-CTTACGTCAGAAGTA 51138
Query 29928 CGGATATAATCGAGTCGCTCAAGTGACGAAC----TATACAAAGATGTCTGCAAAATCAG 29983
||| | | || |||||| | |||| | ||| ||| || || |||
Sbjct 51139 TGGAGCTGACAAGGTAGCTCAAATAGTGAACATGGTTTAC----ATGAACGCTAAGACAG 51194
Query 29984 CCTTCAAGAATGCATTGATGATTTATGATGTACCCTTTGGAAAGTCTCAAGAGATCACAA 30043
| | ||||||||| ||| | ||||| | || ||||| | || || |||| || |
Sbjct 51195 CTTACAAGAATGCTCTGACAGTCTATGACATTCCGTTTGGCGACTCACAGAAGATTACTA 51254
Query 30044 ATTTGATCCCTGAC 30057
| |||| ||||||
Sbjct 51255 ACATGATACCTGAC 51268
>seq222169
Length=327
Score = 140 bits (154), Expect = 1e-28
Identities = 133/170 (78%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 3237 ACAGCAGAAGAAATAAAGAAAATGCGTAACATTTTACGTGATCCAGTAGGCTTTACCGAG 3296
||||||||| | | | || |||||||||||| | ||||| || ||||| || || |||
Sbjct 172 ACAGCAGAACAGCTCCACAAGATGCGTAACATTATGCGTGACCCTGTAGGATTCACTGAG 113
Query 3297 AAGACAGGAACCGTCAAGGGTAAACCCTTCAAGTTTGACCACCGAGAGCACTTATATGAT 3356
||||| ||||| || ||||||||| |||||||||||||||| | |||||||| | |||
Sbjct 112 AAGACTGGAACTGTAAAGGGTAAAGACTTCAAGTTTGACCACAGGGAGCACTTGCACGAT 53
Query 3357 GTATACCGAGACAAACACCCTCGTATAGTCATCGTAGCGGGTCGTCAGGT 3406
|| || ||||| |||||||| || ||||| ||||| || || || ||
Sbjct 52 GTCTATAGAGACCCTCACCCTCGAATTGTCATTGTAGCTGGACGACAAGT 3
>seq249645
Length=476466
Score = 84.2 bits (92), Expect = 7e-12
Identities = 76/96 (79%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 29743 GGTCGTGGCTCTGGAGCTGGCTCTCTTGTCGCTTACCTTCTGGATATCACAGAGGTTGAC 29802
|||||||||||||| |||||||| |||||||| || || | |||||||| |||||
Sbjct 144893 GGTCGTGGCTCTGGTGCTGGCTCGCTTGTCGCCTATGCGCTTAACATCACAGACCTTGAC 144952
Query 29803 CCAATCAAACATGGTCTGTTCTTCGAGCGCTTCTTA 29838
||||| | ||| ||| || || ||||||||||||
Sbjct 144953 CCAATTCATTATGATCTATTGTTTGAGCGCTTCTTA 144988
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 157536891609032
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |