Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_020480.1 Length=50161 Score E Sequences producing significant alignments: (Bits) Value seq78791 762 0.0 seq222169 89.7 2e-13 >seq78791 Length=51567 Score = 762 bits (844), Expect = 0.0 Identities = 2031/3053 (67%), Gaps = 148/3053 (5%) Strand=Plus/Plus Query 3855 CAGCAGAAGAAATAAAAAGAATGCGAAACGTCTTAAGCGATCCAGTAGGCTTTACCCAAA 3914 ||||||| || | || | ||||| ||||| | || || || | || || || | | Sbjct 19713 CAGCAGAGCAACTCAAGAAGATGCGGAACGTTATGAGAGACCCTATCGGATTCACTGAGA 19772 Query 3915 AGACAGGAACCGTAAAGGGTAAACCTTTCAGCTTCGACCACAGAGGGCACTTGTATGACG 3974 ||| || || || ||||||||| |||||| ||||||||| |||| ||||| | || | Sbjct 19773 CGACTGGGACTGTCAAGGGTAAAGCTTTCAAGTTCGACCACCGAGGTCACTTACACGAGG 19832 Query 3975 TATACCGAGACAAGCATCCTCGTATAGTTATCGTTGCGGGGCGACAAGTAGAGAAATCCG 4034 | ||| ||||| || ||| | | || || || || || |||||||||||||| || | Sbjct 19833 TCTACAGAGACCCTCACCCTAGAGTTGTCATAGTAGCTGGACGACAAGTAGAGAAGTCTG 19892 Query 4035 AGACAGTTAACCGACTAATTTTATTCCACGGTTACACAAGGGCTCATACCACTATTACAT 4094 |||| |||||||| | | | | |||||| ||| | || ||||| || ||||| | Sbjct 19893 AGACGGTTAACCGTTTGCTACTCTACCACGGATACCAGCGAGCCCATACTACGATTACCT 19952 Query 4095 ATACAGCACCACGGAACGAGCAAACGACCAGATTCGTAAACGACCGTTTCAGGAAATCCA 4154 | ||||| ||||| || |||||||| || | ||||| |||||||| || || || || | Sbjct 19953 ACACAGCTCCACGTAATGAGCAAACAACACGTTTCGTCAACGACCGCTTTAGAAAGTCTA 20012 Query 4155 TTTCTAACTCTAATGGTGGTATTCTTGAAGGTGACATCAACAAGAACCGAGATGCAAAGA 4214 | | ||||| || | || ||| | | ||||||| || || || |||| Sbjct 20013 TACAGGAATCTAAGCAGGGCTTACTCGAAAGAATGGTAGACAAGAAGCGTGACGCTAAGA 20072 Query 4215 CAGCTATCGGGTTGAAAAACAACACGACTTACTATTTTGGCTCCTCATGGTCTGATGGGG 4274 ||||||| || | | ||| || |||||||||||||| | ||| |||| || | Sbjct 20073 CAGCTATTGGACTAATTAACTCTACAGTGTACTATTTTGGCTCAGCGTGGGCTGACGGAG 20132 Query 4275 ATGCCCTCCGAGGTATTTCAGGTGACATGGTGTTCTTTGACGAGGTTCAGGATATCGGGC 4334 |||| ||||| |||||| | || || || || | || || ||||| |||||||| | Sbjct 20133 ATGCTCTCCGTGGTATTGCTGGCGATATAGTTATGTTCGATGAGGTACAGGATATTACAC 20192 Query 4335 AGACAGCCATTGAGTCAATCGAGAAGAGTATATCTCACTCA--GAGATTCAAGACCCTGC 4392 ||||||| || |||||||| |||| ||| | |||||| | |||||| ||||||||| Sbjct 20193 AGACAGCTATCGAGTCAATTGAGA--AGTCTGTCTCACATAGCGAGATTAAAGACCCTGT 20250 Query 4393 CACCGAGATAAACGGACGTTGCTTCTATACGGGAACACCAAAGCAGAAGGGCTCCTACTA 4452 || ||| | || || || ||||| || || || ||||| ||||| ||||| ||||| Sbjct 20251 TACTGAGCTGAATGGTAAGTGTTTCTACACAGGTACGCCAAAACAGAAAGGCTCTTACTA 20310 Query 4453 CGATAAAGTCTTGTGGGGCAACTCTGACCAGAAGAAATGG---TCTGTGTGCTGTGAGCA 4509 ||| ||| | ||||| | ||| |||||||||||||| || ||||| | Sbjct 20311 CGACCGAGTACTCTGGGGACAATCTAACCAGAAGAAATGGAGCGTTGAGTGCTCT----- 20365 Query 4510 GTGTGGACACGAGCAATTCCTGTCTATCAAAAATATCATGGTTCAGAACGA---AAATCA 4566 ||||| ||| | ||||| || |||| ||||| | |||||| ||| || || | Sbjct 20366 -TGTGGTCACCACCAATTTATGACTATGAAAAACGTAATGGTTATGAATGAGGGAACT-- 20422 Query 4567 AGAAAACGAGCGGAGATATTTTGGGTGCCTTGAGTGTAAAACCGAGCTGAACCGTGAGAA 4626 || | ||||| | || ||||| || || |||||| ||| | |||||||| Sbjct 20423 -GACGAGGAGCGTCGCTACTTTGGCTGTCTGGAGTGTGGCGAGGAGTTAGACCGTGAGCG 20481 Query 4627 TGGTCAATGGATCAAGACAAGACCAAACAATAAGCGATACAGCGGGTACCTCTTTAATCA 4686 ||| ||| | || | ||| | || ||| ||||| || ||| | || || || Sbjct 20482 TGGCTCGTGGGTAGTAACGAAACCTCATAACAAGATGTACAGTGGCTACTTGTTCAACCA 20541 Query 4687 ACTCAACATGACTTGGATCAGTGCAAACCAGATATGGCATGACTATAACAACATGGATGA 4746 || || ||||||||||| ||||||||||| || |||| ||||| || | ||||| Sbjct 20542 GCTTAATATGACTTGGATTAGTGCAAACCAAATCTGGCGTGACTTTACGACTATGGACTC 20601 Query 4747 TATGACCTTTCACAACGAGGTACTGGGTGAGTTCTACTCTGGAGATGAACAACCGTTGTC 4806 ||||| || ||||||||||||||||| ||||| || |||||||| ||||| | | Sbjct 20602 CATGACATTCCACAACGAGGTACTGGGAGAGTTTTATAGCGGAGATGAGCAACCAGTAAC 20661 Query 4807 CTATGAGGACGTGCTGGCTTGTACAGACAAGAATCTGTCTCTTCAAGATA-AATGCGACA 4865 | |||||| || || |||||| ||| | || | ||| |||| | | |||| Sbjct 20662 CCTTGAGGATGTACTAGCTTGTTGTGACCGCACGCT-TAGCTTAAAGAGACGCTCTGACA 20720 Query 4866 TCCCAACCGTCATGGGTATTGACTACGGCTCTGGTGGTCAGTCCAAAACGATCATTACAA 4925 ||||| || ||||| |||||||| || |||| || |||| ||||| || ||||| | Sbjct 20721 CGCCAACTGTAATGGGGATTGACTATGGTAGTGGTAGTAAGTCTAAAACAATTATTACTA 20780 Query 4926 TTGGTCATGAAACCATGCACAAAGGCAAGAAGAAATTATTGATCGTTCACATGGAGAGC- 4984 |||||||| || | || || | |||| | ||||| |||||| Sbjct 20781 TTGGTCAT------------AATTGGGAGGGTAAGCTTGTGATTGACCACATTGAGAGCT 20828 Query 4985 -GC-ACCTAACATGGACA---CAGATACCCGAATTGGTTATATCAAT-----TCCTTG-A 5033 || ||| | | |||| |||| | || | || | ||| | || || | Sbjct 20829 GGCTACCAGATAAAGACAACCCAGACAACCAACATGACCAACTCATTGAGTATCTGTGCA 20888 Query 5034 AGC-ACAAG-----TATAACGTTCAGAAGATCAATGGTGATATCGGGTACGGTCAATACG 5087 ||| ||||| || |||||| |||| || ||||| ||||| |||||| |||| Sbjct 20889 AGCTACAAGCCATCTACAACGTTGAGAAAATAGTCGGTGACATCGGTTACGGTTCTTACG 20948 Query 5088 AG--GGAGAATCCTTCTATGCTATGTACGGCAGAGAGGCGATCTCAACAAGGTATGTAAC 5145 || |||| | | |||| || || || || | || |||||| || || || || Sbjct 20949 AGTCTCAGAAGC--TATATGGCATCTATGGTAGGAACGCTATCTCATGTAGATACGTTAC 21006 Query 5146 ATATCAGACAAACCCTAAAAAGCGTGA-AATCAAAGA-TAAATTTGTC----CTACAAGT 5199 ||| || |||| || ||||| || || || | ||| || ||||| || Sbjct 21007 GTATGCGAATGACCCACGGAAACGTGAGTATAAAGGATTCAATAACTCAACTCTACAGGT 21066 Query 5200 GGACAGAACCTTCTCAATGGA----CTCTTTGATTATGGCTTTCAAACGTGGGGAGATTG 5255 ||| | || ||||||||||| || |||| |||| || || | || | || | Sbjct 21067 AGACCGTACTTTCTCAATGGATAAGCTTATTGA-TATG--TTCCATAAGT-CTAACATAG 21122 Query 5256 TCATCCCTTATAGTGACCCCGAAAAGGTTGAACCGTTCTTTGACCACTATACAGCAATTG 5315 | || || || | | || || ||||||| |||||||||||||| ||||| |||| Sbjct 21123 TTATTCCGTACAAGCAACCAGAGGAGGTTGAGTACTTCTTTGACCACTACACAGCTATTG 21182 Query 5316 AGGCGGTATACTCGGAGTC---CACTCACGGAACAGGACGCAAGAGATATGACCACAGAA 5372 | | ||| | | ||||| |||| | ||||| |||| ||||||||| | | Sbjct 21183 AAATGATATTCACCGAGTCGAACACTTCC---ACAGGTGTTAAGAAGTATGACCACCGTA 21239 Query 5373 CACCTGATGATGCTTTCCACTCTTTGAACTATGTCAGAGAGGGTATCTTCGAGATCAATA 5432 | || || ||||| |||||| |||||||| || ||||||||||| |||| | | || Sbjct 21240 CTCCAGACGATGCATTCCACAGCTTGAACTACGTTAGAGAGGGTATTCACGAGCTTACTA 21299 Query 5433 ACAAATTCGAGTGGGATGGAGCCGCCAGAGATAACTGGA--ATGAGGACAAACTTCTTGA 5490 || ||||| |||| | | | ||||| | | || || |||| ||| |||| Sbjct 21300 ACCGTTTCGA--GGGACGATACAACGAGAGAGACGTTGACCCTGTAGACAGACTGTTTGA 21357 Query 5491 TCATGACATAGATTTACC----------GTCCGAAAACGAGTGGTAATGTTTACTTTCTA 5540 | || ||| ||||| ||| |||| | | || |||| | ||| | Sbjct 21358 AGACCACGGAGACTTACCTACTTGGTAGGTCTCTAAAC-ACTAGT-TTGTTAAATTT-AA 21414 Query 5541 GGACAATATAGATGAGTTAAAATATAGCTGGATT----CTCCCAACGGAGATCAGAAGGC 5596 || || | || | ||| | ||| | ||||| || ||| |||| |||||| | Sbjct 21415 TGA-AACCT--ATTAATTATACTAT-GTCGGATTCTTGCTGTCAAGCGAGACCAGAAGAC 21470 Query 5597 -AGGAGGAAAATACATGGGATTCTTAGACAGATT--CAAACGTAATAAGCAACAAGAGGA 5653 |||||| ||| |||||| | || || | || | || |||| || ||| Sbjct 21471 TAGGAGGGAAAACTATGGGAATGTTTGATAATTTAGCTAA--AAATATGC----CTTGGA 21524 Query 5654 AACACAAAAATACAATGAGGAATTAACCGAGCTGGCAAACTC------AATGTTCAAAGA 5707 || ||| |||| | || |||||| | ||| | || || |||| Sbjct 21525 -----AAGTATATGCTGAG--AAGAAGAGAGCTGAGGAGCTCATTAAGATTGGTC-AAGA 21576 Query 5708 GATCGCCCTCATGAAGGACACAACTGGCGAGCTTCCAGACCAAGAGGATTTTAACCCAAC 5767 ||| | ||| | || ||| ||| ||||| ||||||||| || |||||||| | Sbjct 21577 GATTGGTCTCTTTAAAGACGACACTTACGAGCGTCCAGACCAGTTAGACTTTAACCCCTC 21636 Query 5768 AGACTTCTCCCTTGAAGTATACGACAAGATGATGACAGACGGGCAAGTTAAATCTGCAAT 5827 |||||| ||||||||||| ||||| |||||||| ||||| || |||||| ||| | Sbjct 21637 AGACTTTGACCTTGAAGTATGGGACAAAATGATGACCGACGGACAGGTTAAAGCTGGCTT 21696 Query 5828 AGACATGATCAAACTTTCAGCGACAGCCAAAGGGTTCACCGTGACAGGTGACGATGAGGA 5887 ||| ||||| || || || | || || ||||| | ||||||||||| ||||| Sbjct 21697 AGATATGATTAAGCTATCTTGCTCGGCTCGTGGCTTCACTATTACAGGTGACGACGAGGA 21756 Query 5888 AACTAAAAAGTATGCGGACTTCATCAATGAAAATTTCGAGATGATCAGAGGGAACATGGA 5947 |||||||||||||| || || || | || || ||| ||| | || |||||||| Sbjct 21757 GACTAAAAAGTATGCTGAGTTTATTTCATATAACTTTGAGTCGATTCGTGGCAACATGGA 21816 Query 5948 AGATGTAATCAAAGAGATTATGACAGCTCTTGAATATGGCTACAGCTGTACAGAGAAAGT 6007 || ||||| ||||| | ||||||| || ||||||||| ||| || || || Sbjct 21817 GGACGTAATTGGTGAGATGCTTTCAGCTCTAGAGTATGGCTACTCAGTTACGGAAAAGGT 21876 Query 6008 CTTTGAGTAC---AAAGACGGCAAGATCATGCTCAAGAAGCTAAAAACACTTGATCCATA 6064 ||||||||| ||||| | ||||| | | |||||||| ||||| || || ||| | Sbjct 21877 ATTTGAGTACGATAAAGATAGAAAGATAGTTTTAAAGAAGCTTAAAACGCTAGACCCACA 21936 Query 6065 CAGTGTAGCTGGCAAGACCGACCGTTTTGGCGACCTCATGCATGTCAAACAGCGCATTGG 6124 || || || |||| ||| ||||| || | || |||| ||| ||||| Sbjct 21937 CAAGTTAACTTTAAAGATTGACAAGTTTGGTGATTTAGTGTATGTACGTCAGTCGATTGG 21996 Query 6125 -CAGTAAGACCATCAAGATTCCTGCTGATAAAGTCTTGTGGTATGCTCACCAAAAACGTT 6183 ||| | || || | || || ||| ||| || | || ||| | || || | Sbjct 21997 TCAGCACGA-GATTGATATACCAGCTAGTAATGTGATTCTATACAGTCATGACAAGCGCT 22055 Query 6184 TTGGTAACATCTACGGTCAATCTAGGCTTAGAACGGTATACAAGCATTGGTTCATCAAGG 6243 |||| ||| | |||||||| || || ||||| || |||||||| ||| |||| |||| Sbjct 22056 TTGGCAACCTTTACGGTCAGTCAGCTCTGAGAACAGTCTACAAGCACTGGCTCATTAAGG 22115 Query 6244 ATAAGATGTACAGGTTCGCCAACATCGCTTATGAACGTTACGGTACACCCCTTTTAGTCG 6303 ||||| ||||||| ||||| ||||| || || || ||||| || ||||| || ||||||| Sbjct 22116 ATAAGCTGTACAGATTCGCTAACATTGCCTACGAGCGTTATGGAACACCGCTATTAGTCG 22175 Query 6304 GAACAGTTGAGGACAAAAACGATG-TGACAGATATGACACGCCTTTTAAAAAACATCAAT 6362 | | ||| ||||| ||||||| ||||| | |||| | || || | | || || Sbjct 22176 GTAAAGTACAGGACGCTAACGATGTTGACA-AAATGAATAGTCTATTGAGACGGATTAAC 22234 Query 6363 GGTATGACTGGTCTTGGTTTATCTGG---AGGCGCAAAAGTAGAAGCTATTCAGACAACC 6419 | |||||| ||| | ||||| || || | || |||||||||| | | Sbjct 22235 AGCATGACTTCTCTGTCCATCTCTGGTCAAGACG---ACGTGAAAGCTATTCAAATGAGT 22291 Query 6420 AATGCGGATTTTATTGGTTACATTGAGCACCACGACAGAAAGATCATGGAAGCACTACTT 6479 || || || || |||||||||||||||||||| ||| | ||||| ||||| || | || Sbjct 22292 AACGCTGACTTCATTGGTTACATTGAGCACCATGACCGCAAGATTATGGAGGCTATGCTA 22351 Query 6480 GTACCGCCAGCCCTTCTAGGGTTATC--TCGTGGTCAATCTGGGTCATA--CTCATTGTC 6535 || || || | || || |||| ||| || || ||||| ||||| ||| | | Sbjct 22352 GTTCCACCTATGTTGCTTGG--TATCGGTCGAGGACAGTCTGGCTCATACGCTCTTACTA 22409 Query 6536 ATCAAACCAATTTGACATCTTCATGATTCACCTTGAGAGCATT-CAGCGTGACATCAAAT 6594 || ||||| |||||| | ||||||| || || ||| || ||||||||| | || Sbjct 22410 AT--AACCAGTTTGACGTATTCATGA-GCAGATTAGAAGCGTTACAGCGTGACTTGAAGG 22466 Query 6595 CCCTGATTGAGGAAGAGATAATCCGTCCATTGATTGATTTAAACTTCCCGAATGTTACAA 6654 | || |||||||| || | || | ||| | || || |||||||| || || |||| | Sbjct 22467 CGCTTATTGAGGAGGAAGTCATTAGACCACTAATCGACTTAAACTTTCCTAACGTTAAGA 22526 Query 6655 AGTACCCCGCTTTCACGTTTAAACCTTTAGCGGATCGA-GATATTGACAAGCTGTCAAAT 6713 | ||||| | ||| || || | || | ||| || ||| | ||||| | || Sbjct 22527 AATACCCTTCATTCCAATTCCGTCCACTTGC-TAACGAGGACATTCAAAAGCTTGCTAAC 22585 Query 6714 GTATTCGAGAAGTTGATCAGTGCATCCGTTATCGCTCCAGAGGAAGAATGGTTACGAGAA 6773 |||||| | || |||| | || ||||| | | | ||||| |||||||| || Sbjct 22586 GTATTCATGCAGATGATTACAGCTGGAGTTATTGATGCTAGTGAAGATTGGTTACGTGAG 22645 Query 6774 GAACTTGGGTTCCCTGTAATGTCCGAAGAGGTTCGTAAGTCTATCGAGGAGCG 6826 |||||||| ||||| | ||| ||| ||| |||||| |||| |||||||| Sbjct 22646 GAACTTGGCTTCCCAGCTATGAGCGAGGAGACACGTAAGGCTATTGAGGAGCG 22698 Score = 260 bits (288), Expect = 4e-65 Identities = 359/497 (72%), Gaps = 9/497 (2%) Strand=Plus/Plus Query 31367 TGGAATGCGTGATTTATGCAAACAGGTTCAACCTACCGAGTTTAAGCACATTGTAGCGAT 31426 |||||||| | ||||| ||| || || ||||| ||||| |||| | |||||||| Sbjct 199 TGGAATGCAACAATTATGTAAAGCTGTACAGCCTACTAAGTTTGAGCATCTCGTAGCGAT 258 Query 31427 CAACGCCCTGTACCGCCCACCAGCTTTAGCCTCTGGAGATACTTGGAGATATGCCAACAT 31486 | || ||||| | |||||||| ||||| |||||| ||||||||||| || |||| Sbjct 259 TACAGCATTGTACAGACCACCAGCATTAGCTAGTGGAGACACTTGGAGATACGCTGACAT 318 Query 31487 CAAGAATGGCAGAGAGGAAGAGCGATACAGTCACCCAGAAGAGAAGCAAATCACAGGTGA 31546 |||||||| | || || |||| ||||| |||||||| ||||||| || |||||||| Sbjct 319 TAAGAATGGTAAAGCTGAGGAGCATTACAGCCACCCAGACGAGAAGCGCATAACAGGTGA 378 Query 31547 AACTTATGGGGTTATTACCTACCAAGAGCACGTTATGCAACTTGTTCACCACTTCGCTGG 31606 || | ||| || ||||||| |||||||||||||||| | |||| ||| || ||||| Sbjct 379 GACCTTTGGAGTCATTACCTTCCAAGAGCACGTTATGGAGATTGTACACTCATTTGCTGG 438 Query 31607 CTGGGATTACGGACGAGGCGATAAACTCCGCAAGATGAGTGCAGAGCAACTAGAGGGAAT 31666 |||||||| ||||||||||| ||||| || ||| ||||| ||| |||| || | || Sbjct 439 TTGGGATTATGGACGAGGCGACAAACTACGTAAGGCTAGTGCTGAGGAACTTGAAGCTAT 498 Query 31667 CCGTGAAGAGTTCTTGGCAGATTGTCACGCCAA-TGGT--TATGACTCA-GATGATGATC 31722 || |||||| | | ||| | | || | | | ||| || | || | | Sbjct 499 GCGCTCAGAGTTTATTGAGGATGCTTGCAAGAAGTACTCACACGACGCACAACGAACAGC 558 Query 31723 AATGTGGACT---AT--ATGAGTTATGGGATCGAATCGTTCAGTACATGGGTTATGGTTT 31777 | | || || ||||| | ||| ||| || || |||||||||||||| ||||| Sbjct 559 TTTTCGCTCTCAGATGGATGAGCTTTGGAGTCGTATTGTACAGTACATGGGTTACGGTTT 618 Query 31778 CAACAAATCGCACGGAGTAGCTTACTCAATGCTTACTTACCTGACAGTATATCTGGAGCA 31837 ||| || || ||||||||||||||| | ||| ||||||| |||||| || || ||||| Sbjct 619 CAATAAGTCCCACGGAGTAGCTTACACTATGATTACTTATATGACAGCATGGCTAGAGCA 678 Query 31838 TTACTATCCAGAACACT 31854 ||| ||||| |||| Sbjct 679 CCACTTCCCAGAGCACT 695 Score = 228 bits (252), Expect = 3e-55 Identities = 434/631 (69%), Gaps = 20/631 (3%) Strand=Plus/Plus Query 28150 GAAAGTTTATTGAACGCATGATGAGGAAGCAAGACAAGAAGGAG---CTCCCTACTTTCA 28206 |||||||||| |||| |||| |||||| | |||| || | || || |||||| Sbjct 43911 GAAAGTTTATCGAACAAATGA---GGAAGCGACACAAACAGCACACTCTACCAGCTTTCA 43967 Query 28207 AAATGCCTAGAATGAAACTAGCAAAGGTCACATCATACAGAGGGTACTCACAAGAGACTA 28266 | || | | ||||| | || || || | || ||||| ||||||||||| | Sbjct 43968 AGATTCAAAATATGAAGTTTGCTAAAGTGAACGACTATAGAGGTTACTCACAAGAAGCGC 44027 Query 28267 T---CTCGCATTGGAAGTTCTTTCTTGCTAAAGATGGAGAGCTACAAGACAGGATCATAA 28323 | || | | | || | | | |||| | ||| || || || ||||||| || | | Sbjct 44028 TTGACTGG--TGGAAAATACGATATTGC-ACAGAAGGCGAACTCAAAGACAGAATAGTCA 44084 Query 28324 TTCCGTTTGAAGATGTAGATAATCGCCTTGTTGGTATCACTGGCAGAGCAACCAAAGCAG 28383 | | | ||||||||||| || | ||||| || || ||||| |||||||||||||||| Sbjct 44085 TGGCTCTGGAAGATGTAGACAAAAGACTTGTAGGCATAACTGGGAGAGCAACCAAAGCAG 44144 Query 28384 ATCAACAAGAGAAGTTCATGCACCGACCAAGAAACTTACACACAGGATTTTTCCTAACAG 28443 | ||| || ||||||||||| || || |||||||||||||| || | || || |||| Sbjct 44145 AACAAGTGGAAAAGTTCATGCATCGTCCTAGAAACTTACACACTGGTTACTTTCTCACAG 44204 Query 28444 GGTTGGGAAGAAGCAAGAAGT---TCCTTGAGGAATACGGCTATACGGTTAAAATCGTCG 28500 || | || |||| | ||| | ||| || | | || | || ||||| || || | Sbjct 44205 GGCTTGGTAGAAACTTGAAATATGTCCAAGAAGCAAACAAC---ACAGTTAAGATTGTAG 44261 Query 28501 AAGGTGTTTTTGATTGTGCTCGCTGGTATGACTCAGGGCATAAAAACGTTTGCGCTCCTA 28560 | || ||||||||||||||||||||| ||||| || |||||||| || ||| ||| | Sbjct 44262 AGGGGCTTTTTGATTGTGCTCGCTGGTGGGACTCTGGTCATAAAAATGTATGCTGTCCAA 44321 Query 28561 TCGGGGTATTCTTCACAGAAGAACACATTGAGCAATTATACAAAGCTGGTGTGATCGGTC 28620 | || || |||||||| || || || || ||| | || || || ||||| | || Sbjct 44322 TTGGAGTGTTCTTCACCGAGGAGCATATCTTACAACTCTATAAGGCAGGTGTAACAACTC 44381 Query 28621 TCGATTTTGGGTTCGACAATGATCCAGCTGGACGCAACGGAATAAG-AAGAGCTATCAAG 28679 | || | || || ||||||||| ||| || || |||||| | | ||| || ||| Sbjct 44382 TTGAAATCGGTTTTGACAATGATAAAGCAGGTCGTAACGGATTTCGTAAGGCGTACCAA- 44440 Query 28680 AGAGCTAAGTATAAGTTTGATATAAACGTCCTAGTTTACCCAGAAGGTAAGGACGCTGAT 28739 | ||| || ||||||||| | | ||| | ||||||||||| | || ||||| Sbjct 44441 AAAGCCAAAGGTAAGTTTGAGGTCTATTACCTTATGTACCCAGAAGGGCAAGATGCTGAC 44500 Query 28740 GACTGCACCAAAGAAGAACTCGACGAGGTAG 28770 || | ||||||||||||||| | |||| Sbjct 44501 GATTTGCGAAAAGAAGAACTCGACAAAGTAG 44531 Score = 178 bits (196), Expect = 4e-40 Identities = 249/336 (74%), Gaps = 10/336 (3%) Strand=Plus/Plus Query 10770 GTATGGCTATGAAGCTA-ATACTGTAGTGATCAACCCAGAACAAGAAG-CTCAATTTTTG 10827 || |||||| ||||| | |||||||| || |||| |||| | | || | | ||| Sbjct 26801 GTTTGGCTAC-AAGCTTGACACTGTAGTTATGCACCC-GAACGTAATGGCTGAGCTATTG 26858 Query 10828 AAGAACAAGAACATCCGTGACGCATTCCGTCAGAACAACACTGATCTAGTTTTGCTTCGT 10887 || | || |||| ||||| || |||||| |||||||||| ||| | | |||| | ||| Sbjct 26859 AAACAAAAAGACATTCGTGATGCGTTCCGTGAGAACAACACAGATGTTGCTTTGTTACGT 26918 Query 10888 GGATATCTTGGAGACTTCATGGGTCTTAGC-TTTATCGTTGATTCTCACTTTGAGGCTGA 10946 || ||| |||| ||||||||||| |||| | || |||| ||| |||||| || || Sbjct 26919 GGCTATATTGGCGACTTCATGGG-CTTATCGTTCATCGAGGATGAAAACTTTGCGGATGG 26977 Query 10947 CAACGCTTTGATCCTTGAAAAGAAAGTC-ATTGGTGACATCGCTGACGCTGAACCACTTC 11005 ||| ||| || | || || |||| | || ||||| || ||||||||||| | | Sbjct 26978 TGACGTATTGTTCGTAGAGAA-AAAGACTATCGGTGAAATTGCTGACGCTGAGGGCTTAC 27036 Query 11006 GTACAAAAACGTACAATGAGGACAGCA-ACGATCGTACTATCGTTCGTGCAACTCGCTTC 11064 |||| || ||||| ||||| |||| | || ||||| || || ||||||||||||| | Sbjct 27037 GTACTAAGGTATACAACGAGGA-AGCAGAAGACCGTACGATTGTACGTGCAACTCGCTAC 27095 Query 11065 ACTAATGCTTACTTAACAGACCCTAAAGCGGTTTAC 11100 ||| | |||||| ||||||||||||||||||||||| Sbjct 27096 ACTCAAGCTTACCTAACAGACCCTAAAGCGGTTTAC 27131 Score = 116 bits (128), Expect = 1e-21 Identities = 246/359 (69%), Gaps = 6/359 (2%) Strand=Plus/Plus Query 44010 CGCCACTTTGTCATCATTGACGAGGTAGGGGAACTTAACCCTTCTGAGGCTGTCTCGAAA 44069 || |||||||| || |||||||||||||| || || ||||| | || || | ||| Sbjct 9830 CGACACTTTGTTATTATTGACGAGGTAGGAGAGCTCAACCCAGCAGAAGCAACCGACAAA 9889 Query 44070 GAAGAGCGCAAAATCAAAGAGGAATGTCAGAAGTACATGTCTCAAATAGCACGGCTTGGA 44129 | ||| || |||||||||| |||||| |||||| ||||||||| || ||||| Sbjct 9890 GCAGATAAGAAGCTCAAAGAGGAGTGTCAGCGCTACATGAGTCAAATAGCTCGCCTTGGT 9949 Query 44130 GCTGGCTTGGGGTTCCGTCAGATTTTAGCCACTCAGTACACCACGGGAGATGTCATCCCT 44189 ||||| || || | | | || |||| || |||||| | || || || || || ||| Sbjct 9950 GCTGGTTTAGGATATAGACTAATAGTAGCTACACAGTACCCAACTGGGGACGTTATTCCT 10009 Query 44190 AGA-CAGTGTAAACAAAACAGCGATGCAAAAGTATGCTTTCGTGTACAAAGTGAGGTAGC 44248 ||| | || || || || | || | || |||||||||| |||| | | ||| Sbjct 10010 AGAGCTGT-CAAGCAGAATTGTGACGTTAAGATATGCTTTCGAGTACGTAACGCTACAGC 10068 Query 44249 CAGTAGAGTTACGCTCGACAGTTCAGGAGCCGAGAAGCTACCAGAAATCAGAGGGCGTGC 44308 |||| |||| || || |||||| || ||||| |||| || | ||| || || Sbjct 10069 CAGTCAAGTTGTACTTGATGAGGGAGGAGCTGAAAAGCTTCCAGCTATTAAAGGTCGAGC 10128 Query 44309 TCT-GTACCAGACAGCAGACAAAAGGAGAACTA-TCCAGACATACCTCATTAAGCCAGA 44365 | | ||| || ||| ||| || ||||| || |||||||||| | ||||| |||| Sbjct 10129 TATCGTA-CAATTAGCTGAC-AAGCGAGAAATACTCCAGACATATTTTATTAACTCAGA 10185 Score = 114 bits (126), Expect = 4e-21 Identities = 411/637 (65%), Gaps = 12/637 (2%) Strand=Plus/Plus Query 26965 AGTGAAAAAACTTGGCGAGGGTATCAAGGAAAGAATGAAGGAACGAGCTAAAAACCCAAT 27024 ||| ||||| || || || ||||| || || | || ||||||| || ||| Sbjct 42525 AGTTAAAAAGCTAGGGGAAGGTATTGGAGAGCGACTCAAACAACGAGCCTTGAAGCCACA 42584 Query 27025 GGATGTAATTGGCATCAAAACTGGATGGGCTCCATTCGATTTAGCCGCAAGGGGTTTGGT 27084 || || || || |||| || |||||| | ||||| |||||| | ||||| || Sbjct 42585 AGACGTTATAGGACTCAAGACAGGATGGCACGCTTTCGACTTAGCCTCTCAAGGTTTAGT 42644 Query 27085 CAATGGAGAGCTTACTGTAGTAGGAGCCAGACCAAAAGTCGGTAAATCAACAGTTTTACT 27144 | || ||| | ||| | |||||||| | | ||||||||||| || ||| ||||| Sbjct 42645 TATCGGTGAGTTGACTATCGTAGGAGCTCGCTCCAAAGTCGGTAAGTCTACAACGTTACT 42704 Query 27145 CAATTGGAGCAAAAAGATATGTCATGATGATGGCATCCCTCTTTTGTACATCGACACAGA 27204 || ||| | |||||||| ||| ||| || || | ||| ||| || |||||||| || Sbjct 42705 AAACTGGTGTAAAAAGATTTGTGTTGACGACGGAGTACCTACTTTATATATCGACACTGA 42764 Query 27205 GAATTATACTCATGAGCAAGAAGACAGGTTGCTTTCGTTGATATCTGGTGTTGACCATAC 27264 || || || ||||| ||||| | | | || | || ||||| || | || Sbjct 42765 GATGTACGACCACGAGCAGGAAGATAAGCTACTGAGTATTATCTCTGGAGTCCAGCACCA 42824 Query 27265 AGAAAT-CGAGAATGGACAGTTTGCAAAAGACACCTTCAATGGAAAAGCCAAAGACAAAC 27323 ||||| ||| || || | ||||| | || ||||| | ||| || || Sbjct 42825 TGAAATACGA-AACGGTTACTTTGCTCGTAATACGGAGTTTGGAACTGGCAAGGAGAAGG 42883 Query 27324 TAAAAGCTGTAGCAGAGGCAACTAAAGTGATCGAGTCAGGAAA----CTTT-TATCATGT 27378 |||| || ||||| || | ||| | ||| ||| ||| |||| || || | Sbjct 42884 CTGAAGCGGTTGCAGAAGCTAGTAAGGCTATC---TCA--AAAGCTCCTTTCTACCACAT 42938 Query 27379 GTACCTTCCATTCTTCACCCCTGAGAAGATTGAACACATCGTCAGAGAGTACCAGATCAA 27438 || | ||| ||| || | |||| | | | | ||| || ||||||| | Sbjct 42939 CTATATGCCAAACTTTACGTTAGCCGAGATAGCCAGCGTAATTAGAAAGCACCAGATAGA 42998 Query 27439 TCACGGAATCAAGCTAGTATGCTTTGACTATATCAAGTTACCTTCCAGTGATAGCAAGCT 27498 ||||| || |||| ||| |||||| || || ||| |||| | | || || | Sbjct 42999 ACACGGTATACAGCTCGTAGTCTTTGATTACATTAAGCTACCAAGCTCAAACAGTAACTT 43058 Query 27499 CGGTGACAAAGAGTGGCAACAACTAGGGTACTTGACAAGCAAACTAAAAGACTTAGCTGG 27558 || ||||||||||||||| || || ||| | ||||| |||||||||||||||||| Sbjct 43059 AGGAGACAAAGAGTGGCAAGCTCTTGGATACCTTACAAGTGGACTAAAAGACTTAGCTGG 43118 Query 27559 TATGACACAGCTACCGATTATATCCGCTGTACAGCTA 27595 | || |||| | || || || ||||||||| || Sbjct 43119 TCTGTTACAGATTCCAATAGCGTCAGCTGTACAGTTA 43155 Score = 111 bits (122), Expect = 5e-20 Identities = 120/159 (75%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 16561 CGGTATGTCTGCTATCCGTAAATTCTTGCCGTTCTCTCCTGCCAAAGAGGGTGCTCTAAG 16620 ||||||| || | |||| | ||| || ||||| || ||||| | ||||||||||| Sbjct 32552 CGGTATGGCTAAAGTACGTAGTTACTTACCATTCTCACCAGCCAAGAAAGGTGCTCTAAG 32611 Query 16621 TGACCTTGACAAATCAGGTGAGTCATTCTTCCCAACTTGGTACGAGGCGGCACTCAAGAA 16680 ||||| |||||||| ||| |||||||||||||||| ||||||||| | || || | | Sbjct 32612 CGACCTAGACAAATCTGGTAAGTCATTCTTCCCAACATGGTACGAGTCAGCTCTAACTCA 32671 Query 16681 AGTTCGCCCTATGGAGCGAGCCGTTGGGGGTGCTATGAG 16719 |||| | || ||| | |||| | || || |||||||| Sbjct 32672 AGTTAGACCAATGACGAGAGCTATCGGTGGAGCTATGAG 32710 Score = 91.5 bits (100), Expect = 5e-14 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 10240 TAAATGGCTGATTTCGTACTAGGTCAACACCCAATGTTGAGAAAAGTATTCTTAGATAGA 10299 |||||||||||| ||||| |||||||||||| ||||||| ||||| ||| |||| | | Sbjct 26292 TAAATGGCTGATATCGTATTAGGTCAACACCAGATGTTGAAAAAAGAATTTGTAGACAAA 26351 Query 10300 CGTATCAAAGATTTTACTGATAGTCAATTCGTTGCAGACCAACTGTTCAC 10349 ||||| | || ||| | || | | | ||||| || |||||| | ||||| Sbjct 26352 CGTATTAGAGGTTTGATTGGTCATAATTTCGTAGCTGACCAATTATTCAC 26401 >seq222169 Length=327 Score = 89.7 bits (98), Expect = 2e-13 Identities = 123/172 (72%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 3854 ACAGCAGAAGAAATAAAAAGAATGCGAAACGTCTTAAGCGATCCAGTAGGCTTTACCCAA 3913 ||||||||| | | | | ||||| ||| | | | || || ||||| || || | Sbjct 172 ACAGCAGAACAGCTCCACAAGATGCGTAACATTATGCGTGACCCTGTAGGATTCACTGAG 113 Query 3914 AAGACAGGAACCGTAAAGGGTAAACCTTTCAGCTTCGACCACAGAGGGCACTTGTATGAC 3973 ||||| ||||| |||||||||||| |||| || |||||||| | ||||||| | || Sbjct 112 AAGACTGGAACTGTAAAGGGTAAAGACTTCAAGTTTGACCACAGGGAGCACTTGCACGAT 53 Query 3974 GTATACCGAGACAAGCATCCTCGTATAGTTATCGTTGCGGGGCGACAAGTAG 4025 || || ||||| || ||||| || || || || || || |||||||||| Sbjct 52 GTCTATAGAGACCCTCACCCTCGAATTGTCATTGTAGCTGGACGACAAGTAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159884617776328