Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_021326.1
Length=45242
Score E
Sequences producing significant alignments: (Bits) Value
seq81513 161 3e-35
>seq81513
Length=399
Score = 161 bits (178), Expect = 3e-35
Identities = 191/259 (74%), Gaps = 0/259 (0%)
Strand=Plus/Minus
Query 36100 AATTCTGTTTGTAATAATTTTCTAGTTGATTCCACTGGTTCGCCCCAGTGAAGTTCTATA 36159
||||| |||| ||| || ||| || ||| |||||||| ||||||| | ||| |||
Sbjct 399 AATTCACTTTGAAATCTTTGTCTTAATGCTTCTACTGGTTCTCCCCAGTACAATTCAATA 340
Query 36160 TCTCTACACATTGCGAATAtttttttGCGTTGTTCTATAGATAACTTTTTATTGTCCGGA 36219
||| ||||||| || ||||| ||||| ||||| || ||||| | | |||||| || |||
Sbjct 339 TCTTTACACATGGCAAATATCTTTTTACGTTGGTCAATAGAAATCAATTTATTATCTGGA 280
Query 36220 ACCTCTACTTCTGCTTTTAGTGGATATCCGTTTTCTAGCAAGTCAATGTGACTTTGTTCA 36279
|| ||| | || |||| ||| ||||| |||| | || ||||||| | |||
Sbjct 279 ACAGTTACATTAGCGTTTAAGCTATAACCGTTATCTATAAGTTCTGTGTGACTATTTTCT 220
Query 36280 AGTTCAACACCAGTAGCAACGACGGAATAAGTGCCGTCATTGTCTTTCTGGTATCTTGTA 36339
| |||||||||||| ||||||||||||||| | ||||| | || |||||||| ||
Sbjct 219 AATTCAACACCAGTGGCAACGACGGAATAAATACCGTCGCTATCCAATTGGTATCTAGTG 160
Query 36340 ATGTATTGCATTTAAACCA 36358
|| | |||||||||| ||
Sbjct 159 ATTTGCTGCATTTAAATCA 141
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 144193768568544
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |