Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_021326.1 Length=45242 Score E Sequences producing significant alignments: (Bits) Value seq81513 161 3e-35 >seq81513 Length=399 Score = 161 bits (178), Expect = 3e-35 Identities = 191/259 (74%), Gaps = 0/259 (0%) Strand=Plus/Minus Query 36100 AATTCTGTTTGTAATAATTTTCTAGTTGATTCCACTGGTTCGCCCCAGTGAAGTTCTATA 36159 ||||| |||| ||| || ||| || ||| |||||||| ||||||| | ||| ||| Sbjct 399 AATTCACTTTGAAATCTTTGTCTTAATGCTTCTACTGGTTCTCCCCAGTACAATTCAATA 340 Query 36160 TCTCTACACATTGCGAATAtttttttGCGTTGTTCTATAGATAACTTTTTATTGTCCGGA 36219 ||| ||||||| || ||||| ||||| ||||| || ||||| | | |||||| || ||| Sbjct 339 TCTTTACACATGGCAAATATCTTTTTACGTTGGTCAATAGAAATCAATTTATTATCTGGA 280 Query 36220 ACCTCTACTTCTGCTTTTAGTGGATATCCGTTTTCTAGCAAGTCAATGTGACTTTGTTCA 36279 || ||| | || |||| ||| ||||| |||| | || ||||||| | ||| Sbjct 279 ACAGTTACATTAGCGTTTAAGCTATAACCGTTATCTATAAGTTCTGTGTGACTATTTTCT 220 Query 36280 AGTTCAACACCAGTAGCAACGACGGAATAAGTGCCGTCATTGTCTTTCTGGTATCTTGTA 36339 | |||||||||||| ||||||||||||||| | ||||| | || |||||||| || Sbjct 219 AATTCAACACCAGTGGCAACGACGGAATAAATACCGTCGCTATCCAATTGGTATCTAGTG 160 Query 36340 ATGTATTGCATTTAAACCA 36358 || | |||||||||| || Sbjct 159 ATTTGCTGCATTTAAATCA 141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144193768568544