Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_021529.2 Length=247511 Score E Sequences producing significant alignments: (Bits) Value seq249645 122 1e-22 >seq249645 Length=476466 Score = 122 bits (134), Expect = 1e-22 Identities = 266/394 (68%), Gaps = 16/394 (4%) Strand=Plus/Plus Query 63682 TACCAACCCCGATCATGGCAGGTGTTCGTACGCCAACTCGACAATTTAGCTCATGTGTTA 63741 ||||||| || |||||| ||||||| ||||||||| | || || |||||||| || || Sbjct 264557 TACCAACGCCAATCATGTCAGGTGTGCGTACGCCATCGCGTCAGTTTAGCTCGTGCGTCT 264616 Query 63742 AAATCGAATCTGGCGACTCTCTGCATTCAGTCAACAA----AGTAGCCGAAGCAATCATC 63797 |||||||| ||| || | | || ||||| | |||| || ||| | Sbjct 264617 TAATCGAATGTGGTGATAGCTTAGACTCTATCAACGCCACCACTAGC----GCCATCGTA 264672 Query 63798 AACTATATCAGTAAACGTGCTGGTATCGGTGTTAATGGCGGTGCTATTCGTGC---TGAA 63854 |||| | | |||||||||||||| | || | ||| ||| ||||| || Sbjct 264673 CGCTATGTGTCACAGCGTGCTGGTATCGGCATCAACGCAGGTCGTATCCGTGCCCTTGGT 264732 Query 63855 GGCTCGGTTGTTCGAGCAGGTGAAATTCGACACACTGG-TGTAATCCCATTCTGGAAACA 63913 || | | | || | |||||| | || ||||| |||| ||| || | ||| Sbjct 264733 AGCCC---TATCCGTGGCGGTGAAGCACAGCATACTGGCTGTATTCCTTTT-TATAAATT 264788 Query 63914 CTTTCAGACTGCTGTGAAGTCATGTTCACAAGGTGGTGTTCGTGGTGGTGCTGCAACGCT 63973 || || || || || || | || ||||||||||| || ||||| |||||||| ||| | Sbjct 264789 GTTCCAAACGGCCGTTAAATGCTGCTCACAAGGTGGCGTACGTGGCGGTGCTGCGACGTT 264848 Query 63974 AACTTACCCGATTTGGCATTTAGAAGTTGAAAAACTTTTGGTGCTGAAGAACAACAAAGG 64033 ||||| | ||||||||||||||||| | | |||| || || || ||| || Sbjct 264849 GTTCTACCCACTATGGCATTTAGAAGTTGAGTCATTACTGGTACTCAAAAATAACCGCGG 264908 Query 64034 CGTTGAAGAAAACCGTATTCGTCATCTTGACTAC 64067 |||||||| |||||| | |||||| | |||||| Sbjct 264909 TGTTGAAGACAACCGTGTCCGTCATATGGACTAC 264942 Score = 95.1 bits (104), Expect = 2e-14 Identities = 253/379 (67%), Gaps = 16/379 (4%) Strand=Plus/Plus Query 64776 CCAATCGATTGGTACAATAAAAATGTTGATAAGCT-TGTAAAACCGCATTACAATTTAGA 64834 || || ||| |||||| ||| | | |||||| | || || || |||| |||||| Sbjct 265672 CCGATTGATACGTACAAAAAAGACTTGGATAAGATCTGCCAAGAGCCACTACA-TTTAGA 265730 Query 64835 CTGGGAATCACTACGAGAAGACGTGATTCGCTATGGTATGCGCAACGATACAACATCTGC 64894 |||||| | ||||| | || | | | | ||| |||||||| ||| | | || Sbjct 265731 TTGGGAAACGCTACGTGGCGAGATCACTGAGCACGGTCTGCGCAACTCTACCCTAACCGC 265790 Query 64895 ATTCATGCCGTGTGAAAGTAGTTCA---CAAATCAGTAACAGTACAAATGGCATCGAGCC 64951 || ||||||| ||||| ||| || ||| || || || || |||||||| Sbjct 265791 CTTGATGCCGTCTGAAACC---TCAAGTCAGATCGCCAATGCGACCAACGGTATCGAGCC 265847 Query 64952 GCCACGCGATCTAGTATCGA-CTAAGCAGTCAAAAGATGGTGTATTCAACCAAGTAGTTC 65010 ||||| | ||| || || | | ||||| ||||||||||| | || || ||||| || | Sbjct 265848 ACCACGTGGTCTGGTCTCTATCAAAGCA-TCAAAAGATGGCATCTTAAAGCAAGTCGTGC 265906 Query 65011 CTGAAGTTGATTTGCTGAAAGATGAATACGGTCTAGCGTGGAAAGTTTGTGCGAAAGACA 65070 |||| |||| ||| |||||| | |||| ||| ||| || | ||| ||| Sbjct 265907 CTGAGATTGACAAGCTAAAAGATCAGTACGAGCTACTATGGCAAAT---GCCGA---ACA 265960 Query 65071 ACTATGGTTATCTGACTCTAGTTGCAATTATGCAGAAATTCGTTGACCAGAGCATCTCCG 65130 | | ||||| || | || || || || ||||| |||||||| || || || ||||| | Sbjct 265961 ATGACGGTTACCTAAAGCTGGTCGCTATCATGCAAAAATTCGTCGATCAAAGTATCTCTG 266020 Query 65131 CTAATGAATACCACGATCC 65149 | ||| || ||||||| Sbjct 266021 CCAATACTAACTACGATCC 266039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 789261952784480