Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_021856.1 Length=155631 Score E Sequences producing significant alignments: (Bits) Value seq45850 724 0.0 seq255890 628 2e-175 seq158858 190 2e-43 seq81859 176 4e-39 seq144782 149 6e-31 seq3707 129 6e-25 seq182678 114 1e-20 >seq45850 Length=23888 Score = 724 bits (802), Expect = 0.0 Identities = 784/1032 (76%), Gaps = 13/1032 (1%) Strand=Plus/Plus Query 12776 AACGTCTTTGTTTTTGTATCCGCAACACGAACACAATTGA---GAACTTGCAAACGTTTT 12832 ||||||||| |||| ||||| ||||| ||||| ||||| ||| ||||| ||||| Sbjct 1 AACGTCTTTATTTTGATATCCACAACAAGAACATAATTGGCTGGAA---GCAAATGTTTT 57 Query 12833 AGATACCGCAACAACTTGTTTGCCGTACCGTTTCGCTTTGTATTCAAGCATCGTTCTGAA 12892 ||||| ||| ||||||||||| |||| ||| ||||| ||||| | ||| |||| || Sbjct 58 CGATACGACAATGACTTGTTTGCCATACCATTTTGCTTTATATTCCAACATGGTTCGAAA 117 Query 12893 TTGATACCAAGATACTTCACTAATAGATTTGGCTAACTTATGATTCTTTAGCATATTACT 12952 || ||||||||||||||||||| | ||| ||||||||||||||||||| |||||| Sbjct 118 CTGTGACCAAGATACTTCACTAATTGCTTTTGCTAACTTATGATTCTTTAACATATTCGA 177 Query 12953 TACTTGCAAATCTTCAATACCGATTACATCGTGGTTTTTGATGATTTCGGTAGAGATTTT 13012 |||||||||||| || |||||||| ||||||||| ||||||||||||| || |||||||| Sbjct 178 TACTTGCAAATCCTCTATACCGATAACATCGTGGCTTTTGATGATTTCAGTTGAGATTTT 237 Query 13013 TTGCAAGTAATCTGTTCTTGCATTGGTGATTTTTTCGTGAATACGTGCAACTTTAATTCG 13072 | ||||||||| |||| ||||| | || | ||| ||||| | || ||||| | ||| Sbjct 238 GTCTAAGTAATCTTTTCTAGCATTTGATATGTATTCATGAATTCTAGCTACTTTTACTCG 297 Query 13073 TTGCTTATTCCAATTAGAACCGCCTTTTGTGCGTCTGGAAAGAATACGTTGTGCGTTTGC 13132 ||| |||||||| |||| ||||| | | ||| ||||||| ||| ||||| || || Sbjct 298 TTGTTTATTCCAGCGAGAAGATCCTTTCATTCTTCTAGAAAGAACACGCTGTGCTTTCGC 357 Query 13133 TAATTTTTCTTCAAGTTTACGAAACCACTTTGGATTTTCGTATGGTGTTCCATCTGAAAG 13192 || || ||||| | | || || |||| |||||||| || |||||||||||||| | Sbjct 358 CAACTTATCTTCTAATGATCGGAAAAACTTCGGATTTTCATAGGGTGTTCCATCTGACAA 417 Query 13193 AGTTGCGAAGGTTTTTAATCCAACATCTATACCAATAGAAGAACCTGTTTTTTCTAATGG 13252 | | ||||| ||||| ||| |||||||| ||||| ||||| |||||| | | Sbjct 418 AATGGCGAAATCTTTTAGTCCTACATCTATCCCAATGTAAGAATGTGTTTTCGGAAGTTC 477 Query 13253 TTGCACCTCTGTTTCTACAAGAATGGAAACAAAATATTTACCACTCGGATTACGTCTAAC 13312 ||| || |||||||| || | | || ||||||||| ||||| || || |||||||| Sbjct 478 TTGTACTTCTGTTTCAACTAATAGTGACACAAAATATCTACCAGAAGGGTTTCGTCTAAC 537 Query 13313 AGTAGCGTTAAGAATACGACCATGTACTTCACGACTTTTTGCAAAGCGAACAAGACCAAG 13372 ||| || || | |||||| || | ||||||||||||||| | ||| |||||||| || || Sbjct 538 AGTCGCATTTACAATACGTCCCTCTACTTCACGACTTTTGGGAAATCGAACAAGGCCTAG 597 Query 13373 TTTCGGCAATTTAATTTTGTTGCCTACAATGGCAATGTTTCCATTCGTGTGTTTTGTTGT 13432 ||| ||||| || |||||||| ||||||| |||||| ||| |||| || |||||||| || Sbjct 598 TTTGGGCAACTTTATTTTGTTCCCTACAACGGCAATATTTTCATTTGTTTGTTTTGTGGT 657 Query 13433 ATAAGATTGAACCTTATTCTTTTTGGACTTGAAGCGAGGTGCATCGTTTTGCTTCTTAAA 13492 ||||||||| || |||||||| ||||| ||||| || || ||| ||||| || || || Sbjct 658 ATAAGATTGTACGTTATTCTTCTTGGATTTGAAACGCGGGGCACTATTTTGTTTTTTGAA 717 Query 13493 GAAGCGAGAATAAGCATCAGCAAGGTTTTTGAGTGAAGATTGAATCGCAATGCTGTCCAC 13552 || || | ||| ||||| |||||||| | || || ||||||||||| || ||||| Sbjct 718 AAATCGTGTATATGCATCCGCAAGGTTGCGAACAGACGACTGAATCGCAATACTATCCAC 777 Query 13553 CTCTTTTAACCAAACTAATTCTTTCTTTAATTGG--GTTAATTGAGAAGAACACGAATTG 13610 ||||| | |||||| || |||||||| | ||| | | || | ||| || | | Sbjct 778 TTCTTTGAGCCAAACGAACTCTTTCTTCA--TGGCAGGAAGTTTGGCAGAGCATGTACCA 835 Query 13611 TAAGTCAAACCTTTTCCTGTTGCCTTATAAGTATCGTTCCATTTTGCGAGGAAATGATTG 13670 || || ||||||||||| || | || || | | | |||| | |||||||||||| Sbjct 836 TATGTTAAACCTTTTCCAGTCTCTTTGTATGCGTGATCCCATAGGGATAGGAAATGATTG 895 Query 13671 AATACAAAACGAGAACAACCGATTGTTTTAGCAATCAGTATTTCTTGTTCTTTGCTTGGA 13730 |||||||| ||||||||||| || ||||| ||| || ||| ||||| ||| ||||| Sbjct 896 AATACAAAGCGAGAACAACCTATCGTTTTGTTAATTAGAATTGCTTGTGCTTGATTTGGA 955 Query 13731 TAGATACGAAATTTATATGCTTTATTGACCAACATGACTTTCACCTCCTTGTGTGT-TAT 13789 ||||||||||| ||||| |||||||| | | ||| ||||||||| | | || ||| Sbjct 956 TAGATACGAAACTTATAAGCTTTATTAATTATCATTTGATTCACCTCCATTTCGGTATAT 1015 Query 13790 GA-TATACATAT 13800 || ||| ||||| Sbjct 1016 GACTAT-CATAT 1026 Score = 87.8 bits (96), Expect = 2e-12 Identities = 81/100 (81%), Gaps = 2/100 (2%) Strand=Plus/Plus Query 14006 ATCCCTTGTCCGAAGGCGATTCATCTCCCACCTACTCACTGGGCTACG-CCCTTCACGTT 14064 ||||||||| ||||| | ||||||||||||||||||||||| || | ||||||||| | Sbjct 1098 ATCCCTTGTTCGAAGCCAGTTCATCTCCCACCTACTCACTGGACTGTGACCCTTCACGCT 1157 Query 14065 CCTTGAGGTGGGAGTATTCTCGCCTATTTTTGATaaaaaa 14104 | |||||| ||||| |||| | ||| |||||||||| Sbjct 1158 CTTTGAGGAAGGAGTCTTCTTGGCTA-AAATGATAAAAAA 1196 Score = 82.4 bits (90), Expect = 8e-11 Identities = 99/133 (74%), Gaps = 10/133 (8%) Strand=Plus/Plus Query 12561 TTGAACTACCCCCACTTAACACCCTTACGGGTTGTTT-GAAGTGAGGGATTCCTACGAAC 12619 ||||||||||||||||| |||| | |||| ||||||||| ||||||| | | Sbjct 6203 TTGAACTACCCCCACTT-------TTACT--TCGTTTAGAAGTGAGGAATTCCTAAGTAA 6253 Query 12620 TCCGTTCTATCGAACAGATATTTAGTAGGCTAACCCCGTAGCCCCTACGGTTAGAAGTCT 12679 |||| ||||||| || | |||||| ||||| || || |||||||||||| || Sbjct 6254 AGAGTTCAATCGAACTCTAGTTGATTAGGCTGCCCCCGCAGTCCTTACGGTTAGAAGCCT 6313 Query 12680 TATCGCTTCATTT 12692 ||| ||||||||| Sbjct 6314 TATTGCTTCATTT 6326 >seq255890 Length=19928 Score = 628 bits (696), Expect = 2e-175 Identities = 742/1008 (74%), Gaps = 40/1008 (4%) Strand=Plus/Plus Query 12776 AACGTCTTTGTTTTTGTATCCGCAACACGAACACAATTGA---GAACTTGCAAACGTTTT 12832 ||||||||| |||| ||||| || || ||||| ||||| ||| ||||| ||||| Sbjct 1 AACGTCTTTATTTTGATATCCACAGCAAGAACATAATTGGCTGGAA---GCAAATGTTTT 57 Query 12833 AGATACCGCAACAACTTGTTTGCCGTACCGTTTCGCTTTGTATTCAAGCATCGTTCTGAA 12892 ||||| ||| ||||||||||| |||| ||| ||||||||||| | ||| | || || Sbjct 58 CGATACGACAATGACTTGTTTGCCATACCATTTTGCTTTGTATTCTAACATGGATCGAAA 117 Query 12893 TTGATACCAAGATACTTCACTAATAGATTTGGCTAACTTATGATTCTTTAGCATATTACT 12952 ||| |||||||||| |||||||| | ||| |||||||||| |||||||| |||||| Sbjct 118 TTGCAACCAAGATACCTCACTAATTGCTTTTGCTAACTTATAATTCTTTAACATATTCGA 177 Query 12953 TACTTGCAAATCTTCAATACCGATTACATCGTGGTTTTTGATGATTTCGGTAGAGATTTT 13012 |||||||||||| || |||||||| ||||||||||||||||||||||| || || ||||| Sbjct 178 TACTTGCAAATCCTCTATACCGATAACATCGTGGTTTTTGATGATTTCAGTTGAAATTTT 237 Query 13013 TTGCAAGTAATCTGTTCTTGCATTGGTGATTTTTTCGTGAATACGTGCAACTTTAATTCG 13072 | |||||||||| |||| | ||| | || | ||| ||||| | || || || | ||| Sbjct 238 GTCCAAGTAATCTTTTCTAGTATTTGATATGTATTCATGAATTCTAGCTACCTTTACTCG 297 Query 13073 TTGCTTATTCCAATTAGAACCGCCTTTTGTGCGTCTGGAAAGAATACGTTGTGCGTTTGC 13132 ||| |||||||| |||| ||||| | | ||| ||||||| ||| ||||| || || Sbjct 298 TTGTTTATTCCAGCGAGAAGATCCTTTCATTCTTCTAGAAAGAACACGCTGTGCCTTCGC 357 Query 13133 TAATTTTTCTTCAAGTTTACGAAACCACTTTGGATTTTCGTATGGTGTTCCATCTGAAAG 13192 || || ||||| | | || || | || |||||||| || ||||||||||||| | Sbjct 358 CAACTTATCTTCTAATGATCGGAAAAATTTCGGATTTTCATAGTGTGTTCCATCTGACAA 417 Query 13193 AGTTGCGAAGGTTTTTAATCCAACATCTATACCAATAGAAGAACCTGTTTTTTCTAATGG 13252 | | ||||| ||||| ||| |||||||| ||||| ||||| |||||| | | Sbjct 418 AATAGCGAAATCTTTTAGTCCTACATCTATTCCAATGTAAGAATGTGTTTTCGGAAGTTT 477 Query 13253 TTGCACCTCTGTTTCTACAAGAATGGAAACAAAATATTTACCACTCGGATTACGTCTAAC 13312 ||| || |||||||| || | | || ||||||||| ||||| || || ||||||| Sbjct 478 TTGTACTTCTGTTTCAACTAATAGTGACACAAAATATCTACCAGAAGGGTTCTGTCTAAC 537 Query 13313 AGTAGCGTTAAGAATACGACCATGTACTTCACGACTTTTTGCAAAGCGAACAAGACCAAG 13372 ||||| || | |||||| || | |||||| ||||||| ||||| |||||||| || || Sbjct 538 TGTAGCATTTACAATACGCCCCTCTACTTCGTGACTTTTGGCAAATCGAACAAGGCCTAG 597 Query 13373 TTTCGGCAATTTAATTTTGTTGCCTACAATGGCAATGTTTCCATTCGTGTGTTTTGTTGT 13432 ||||||||| || |||||||| ||||||| |||||| ||| |||| || |||||||| || Sbjct 598 TTTCGGCAACTTTATTTTGTTCCCTACAACGGCAATATTTTCATTTGTTTGTTTTGTGGT 657 Query 13433 ATAAGATTGAACCTTATTCTTTTTGGACTTGAAGCGAGGTGCATCGTTTTGCTTCTTAAA 13492 ||||||||| || || ||||| || || || ||||| ||| Sbjct 658 ATAAGATTGTACGTTGTTCTTCTTAGATTTAAAGCG--------CGT------------- 696 Query 13493 GAAGCGAGAATAAGCATCAGCAAGGTTTTTGAGTGAAGATTGAATCGCAATGCTGTCCAC 13552 ||||||||| |||||||| | || || ||||||||||| || ||||| Sbjct 697 ---------ATAAGCATCCGCAAGGTTGCGAACAGACGACTGAATCGCAATACTATCCAC 747 Query 13553 CTCTTTTAACCAAACTAATTCTTTCTTTAATTGG--GTTAATTGAGAAGAACACGAATTG 13610 ||||||| |||||| | |||||||| | ||| | || || | ||| || | Sbjct 748 TTCTTTTAGCCAAACAAGCTCTTTCTTCA--TGGCAGGTAGTTTGGCAGAGCATATACCA 805 Query 13611 TAAGTCAAACCTTTTCCTGTTGCCTTATAAGTATCGTTCCATTTTGCGAGGAAATGATTG 13670 || ||||| ||||||||||| | || || | | |||||| | |||||||||||| Sbjct 806 TAGGTCAAGCCTTTTCCTGTCTCTTTGTATGCGTGATTCCATAAGGATAGGAAATGATTG 865 Query 13671 AATACAAAACGAGAACAACCGATTGTTTTAGCAATCAGTATTTCTTGTTCTTTGCTTGGA 13730 |||||||| |||||||| || || ||||| || || ||| ||||| ||| ||||| Sbjct 866 AATACAAAGCGAGAACACCCAATCGTTTTGTTGATTAGAATTGCTTGTGCTTGATTTGGA 925 Query 13731 TAGATACGAAATTTATATGCTTTATTGACCAACATGACTTTCACCTCC 13778 ||||||||||| ||||| |||||||| | || || ||||||||| Sbjct 926 TAGATACGAAACTTATAGGCTTTATTCATCATTATTTGATTCACCTCC 973 Score = 102 bits (112), Expect = 8e-17 Identities = 97/121 (80%), Gaps = 5/121 (4%) Strand=Plus/Plus Query 14003 GCTATCCCTTGTCCGAAGGCGATTCATCTCCCACCTACTCACTGGGCTACG-CCCTTCAC 14061 |||||||||||| ||||| | |||||||||||||||||||||||| || | |||||||| Sbjct 1065 GCTATCCCTTGTTCGAAGCCAATTCATCTCCCACCTACTCACTGGACTGTGACCCTTCAC 1124 Query 14062 GTTCCTTGAGGTGGGAGTATTCTCGCCTATTTTTGATaaaa---aaaaaGACAGCTCATT 14118 | ||||||||| ||||| |||| | ||| |||||||| ||||| | |||||| Sbjct 1125 GCTCCTTGAGGAAGGAGTCTTCTTGGCTA-AAATGATAAAAATGAAAAAAGCCTCTCATT 1183 Query 14119 G 14119 | Sbjct 1184 G 1184 >seq158858 Length=235449 Score = 190 bits (210), Expect = 2e-43 Identities = 284/401 (71%), Gaps = 13/401 (3%) Strand=Plus/Plus Query 140958 GCAAAGACAGAACTTACAACTACACTAGAAAGAATGATCTA---TGC--CAACACCTGCA 141012 || || |||| | | |||||| | |||||||| ||| || ||| ||| | | Sbjct 216160 GCTAAAACAGCATTAACAACTCAATTAGAAAGACAGATATACTTTGCTACAAAA-----A 216214 Query 141013 AGATAGGGGTGTTTGGCTGCTTTGAAGTAACCATAGGTATGGGTGGTAGTGAGCGGGTAG 141072 |||| || || ||||| || |||||||| || || || | ||| | ||| || || | Sbjct 216215 AGATGGGTGTCTTTGGTTGTTTTGAAGTCACTATTGGATTTAATGGAAATGAACGAGTCG 216274 Query 141073 ATTATATCACTTACGACACAAAAGGGATATGGCGCTGCTATGAAATCAAGGTGTCAGTAG 141132 ||||||| ||||||||||| || || || ||||| ||||||||||| || || ||| | | Sbjct 216275 ATTATATGACTTACGACACTAAGGGTATTTGGCGATGCTATGAAATTAAAGTTTCACTTG 216334 Query 141133 CCGACTTTAGGAGTACAGCTAAGAAGACCTTCTGTGGTCATTATAACTACTATGTGATGC 141192 | || ||||| |||| ||| ||||| || || || || |||| ||| |||| ||| |||| Sbjct 216335 CTGATTTTAGAAGTAAAGCAAAGAAAACTTTTTGCGGACATTTTAATTACTTTGTAATGC 216394 Query 141193 CTAAGGAGCTTTATGATAAAGTAAAAGATGAGGTACCTGCACATATAGGAGTTTATATTG 141252 |||| || | | ||| || || |||||||| | || | ||| |||| |||||| || Sbjct 216395 CTAAAGAATTATTTGAGAAGGTTAAAGATGAAATCCCATCTCATGTAGGTGTTTATGTTA 216454 Query 141253 ATGGTAGATACTCCATTAAGAGAGCTAAGAAGCAAGAGTTATCCGTAGACGAGCAGGTAC 141312 | | || | |||||| ||| || |||||| || ||| || || ||| | ||| Sbjct 216455 ACG---GAATGTGTGTTAAGAAAGCCAAAAAGCAAAAGCTATTAGTGGAAGAGAAAGTAT 216511 Query 141313 TTAAAGACTCTCTTATTCGATCTCTATATAGGGAAGCGGAC 141353 | ||||| || | |||||||| ||| || || ||||| Sbjct 216512 TAAAAGATTCATTGATTCGATCATTATCAAGAGAGTCGGAC 216552 >seq81859 Length=207 Score = 176 bits (194), Expect = 4e-39 Identities = 162/205 (79%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 12595 TTTGAAGTGAGGGATTCCTACGAACTCCGTTCTATCGAACAGATATTTAGTAGGCTAACC 12654 || ||||||||||||||||| | | |||||||||||| ||| | |||||||||| Sbjct 3 TTAGAAGTGAGGGATTCCTAAGTAAAGAGTTCTATCGAACTCTAATTGATTAGGCTAACC 62 Query 12655 CCGTAGCCCCTACGGTTAGAAGTCTTATCGCTTCATTTTTAATATTTTGTCCTGCGTTAA 12714 ||| || || | |||||||||| |||||||||||||| || | ||| | |||||||| Sbjct 63 CCGCAGTCCTTGCGGTTAGAAGCCTTATCGCTTCATTCTTTAGATTGATGCTTGCGTTAA 122 Query 12715 TGTCTCTATCGTGATGTGTTCCGCAAGATGGGCAATCCCATTCACGAAGATTTAGATTCT 12774 | || ||||| || ||||| | ||||| || || ||||||||||| || |||||||| | Sbjct 123 TATCCCTATCATGGTGTGTACGACAAGAAGGACAGTCCCATTCACGTAGGTTTAGATTTT 182 Query 12775 TAACGTCTTTGTTTTTGTATCCGCA 12799 |||||||||| |||| ||||| || Sbjct 183 TAACGTCTTTATTTTGATATCCACA 207 >seq144782 Length=84550 Score = 149 bits (164), Expect = 6e-31 Identities = 243/352 (69%), Gaps = 11/352 (3%) Strand=Plus/Plus Query 12639 ATTTAGTAGGCTAACCCCGTAGCCCCTACGGTTAGAAGTCTTATCGCTTCATTTTTAATA 12698 ||| ||||||||| ||| ||| |||||||||| ||||||||| ||| | Sbjct 37017 ATTCAGTAGGCTATCCCGATAGTTCCTACGGTTA-----------GCTTCATTTCTAAGA 37065 Query 12699 TTTTGTCCTGCGTTAATGTCTCTATCGTGATGTGTTCCGCAAGATGGGCAATCCCATTCA 12758 || || ||| |||| |||||||| |||||||| || ||| | || ||||| | ||| Sbjct 37066 TTGAGTGCTGTGTTACGATCTCTATCATGATGTGTGCCACAATAAGGATAATCCTACTCA 37125 Query 12759 CGAAGATTTAGATTCTTAACGTCTTTGTTTTTGTATCCGCAACACGAACACAATTGAGAA 12818 |||| |||||||| ||| | ||| ||||||| || |||| ||||| |||||| | Sbjct 37126 CGAATGTTTAGATTTTTAGCATCTATGTTTTTATAGTTGCAATTGGAACATAATTGACTA 37185 Query 12819 CTTGCAAACGTTTTAGATACCGCAACAACTTGTTTGCCGTACCGTTTCGCTTTGTATTCA 12878 ||||| |||||||||| |||| |||||| | |||| || |||| |||| Sbjct 37186 GAAGCAAATGTTTTAGATATTACAACTCATTGTTTACTATACCACTTTACTTTATATTTC 37245 Query 12879 AGCATCGTTCTGAATTGATACCAAGATACTTCACTAATAGATTTGGCTAACTTATGATTC 12938 | ||| ||| ||||| |||||| | |||||||| | ||| | | ||| ||| Sbjct 37246 AACATTGTTTAAAATTGTGGCCAAGACATGTCACTAATCGCTTTTACAAGCTTTCTATTT 37305 Query 12939 TTTAGCATATTACTTACTTGCAAATCTTCAATACCGATTACATCGTGGTTTT 12990 || |||||| ||| | || || | ||| || | || |||| || |||| Sbjct 37306 TTGAGCATACCACTGAATTATAACTATTCTTTATCAATGACATGATGCTTTT 37357 >seq3707 Length=21618 Score = 129 bits (142), Expect = 6e-25 Identities = 230/329 (70%), Gaps = 5/329 (2%) Strand=Plus/Plus Query 13455 TTGGACTTGAAGCGAGGTGCATCGTTTTGCTTCTTAAAGAAGCGAGAATAAGCATCAGCA 13514 ||||||||||| ||||| |||||||||||||| |||||||| | | ||||||||| Sbjct 17685 TTGGACTTGAAACGAGGGCGTTCGTTTTGCTTCTTGAAGAAGCGGTCAAACGCATCAGCA 17744 Query 13515 AGGTTTTTGAGTGAAGAT-TGAATCGCAATGCTGTCCACCTCTTTTAACCAAACTAATTC 13573 || | ||||| | ||| |||| | | || ||||| || || ||||| | || || Sbjct 17745 AGATGTTTGA-CGCTGATCTGAACAGAGGTACTATCCACTTCCTTCAACCAGTCGAACTC 17803 Query 13574 TTTCTTTAATTGGGTTAATTGAGAAGAACACGAATTGTAAGTCAAACCTTTTCCTGTTGC 13633 | ||| || | | || ||||| ||| ||| | || |||||||| |||| Sbjct 17804 CTGCTTCAACAAAGGAATTTCTTTGGAACAAGAACCGTAGGACAGTCCTTTTCCAGTTGT 17863 Query 13634 CTTATA-AGTATCGTTCCATTTTGCGAGGAAATGATTGAATACAAAACGAGAACAACCGA 13692 ||| || ||| || | ||| || || | ||| || ||||| | || || ||||| |||| Sbjct 17864 CTTGTACAGT-TCATCCCACTTCGCCAAGAAGTGGTTGAAGATGAAGCGCGAACACCCGA 17922 Query 13693 TTGTTTTAGCAATCAGTATTTCTTGTTCTTTGCTTGGATAGATACGAAATTTATATGCTT 13752 |||| || || ||||| ||||| || ||||| | || ||| | | ||||| || || | Sbjct 17923 TTGTCTTCGCGATCAGGATTTCCTGCTCTTTTGTGGGGTAGTTTCTGAATTTGTAGGCCT 17982 Query 13753 TATTGACCAACATGA-CTTTCACCTCCTT 13780 | | ||||| | |||||||||||| Sbjct 17983 TGTGCTTCAACACCATTTTTCACCTCCTT 18011 >seq182678 Length=1699 Score = 114 bits (126), Expect = 1e-20 Identities = 212/307 (69%), Gaps = 3/307 (1%) Strand=Plus/Minus Query 13476 TCGTTTTGCTTCTTAAAGAAGCGAGAATAAGCATCAGCAAGGTTTTTGAGTGAAGAT-TG 13534 ||||| |||||||| |||||||| | | ||||||||||| | ||||| | ||| || Sbjct 1690 TCGTTCTGCTTCTTGAAGAAGCGGTCAAACGCATCAGCAAGATGTTTGA-CGCTGATCTG 1632 Query 13535 AATCGCAATGCTGTCCACCTCTTTTAACCAAACTAATTCTTTCTTTAATTGGGTTAATTG 13594 || | | || ||||| || || ||||| | || || | |||||| | | || Sbjct 1631 AACAGAGGTACTATCCACTTCCTTCAACCAGTCGAACTCCTGCTTTAACAAAGGAATTTC 1572 Query 13595 AGAAGAACACGAATTGTAAGTCAAACCTTTTCCTGTTGCCTTATAAGTATCGTTCCATTT 13654 ||||| ||| ||| | || |||||||| || | ||| || | || | ||| || Sbjct 1571 TTTGGAACAAGAACCGTAGGACAGTCCTTTTCCAGTGGTCTTGTACATTTCATCCCACTT 1512 Query 13655 TGCGAGGAAATGATTGAATACAAAACGAGAACAACCGATTGTTTTAGCAATCAGTATTTC 13714 || | ||| || ||||| | || || ||||| ||||| || || |||||||| ||||| Sbjct 1511 CGCCAAGAAGTGGTTGAAGATGAAGCGTGAACACCCGATCGTCTTCGCAATCAGGATTTC 1452 Query 13715 TTGTTCTTTGCTTGGATAGATACGAAATTTATATGCTTTATTGACCAACATGA-CTTTCA 13773 || ||||| | || ||||| | ||||| || || || | ||||| | ||||| Sbjct 1451 CTGCTCTTTTGTGGGGTAGATTCTGAATTTGTAGGCCTTGTGCTTCAACACCATTTTTCA 1392 Query 13774 CCTCCTT 13780 ||||||| Sbjct 1391 CCTCCTT 1385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496228069130080