Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_021861.1 Length=30910 Score E Sequences producing significant alignments: (Bits) Value seq64498 87.8 4e-13 >seq64498 Length=562 Score = 87.8 bits (96), Expect = 4e-13 Identities = 114/156 (73%), Gaps = 4/156 (3%) Strand=Plus/Plus Query 29870 ACTTTGGATTGCGGCATATCCAAATAATGAAGTAACACCAGTTCCAAACTATAGCTTTTT 29929 ||| ||| |||| | |||||| || | | ||||| | || || || ||| ||| || Sbjct 347 ACTGTGGCTTGCCGAATATCCTGATTACAATGTAACCACCGTGCCGAATTATGGCTACTT 406 Query 29930 CCCAAGTATGGACGGAATTTCAGTAT--TCCAGTTCACATCAACTTATGTTGCTGGCGGA 29987 ||| ||| | || ||| | |||| |||||||||| ||||| ||| |||||||| Sbjct 407 CCCGAGTTTTGAT--AATGTAGGTATCTTCCAGTTCACGTCAACCTATCGCGCTGGCGGT 464 Query 29988 CTTGATGGAAATGTTGATTTAACAGGAATCACAGAT 30023 |||||||| || |||||| |||| || ||||| ||| Sbjct 465 CTTGATGGCAACGTTGATCTAACTGGCATCACTGAT 500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 98476905212992