Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_022765.1
Length=49836
Score E
Sequences producing significant alignments: (Bits) Value
seq78791 417 3e-112
>seq78791
Length=51567
Score = 417 bits (462), Expect = 3e-112
Identities = 754/1092 (69%), Gaps = 29/1092 (3%)
Strand=Plus/Plus
Query 4257 CAGCAGAAGAAATAAAAAGAATGAGAAACGTCTTAAGTGATCCAGTAGGCTTTACCCAAA 4316
||||||| || | || | ||| | ||||| | || || || | || || || | |
Sbjct 19713 CAGCAGAGCAACTCAAGAAGATGCGGAACGTTATGAGAGACCCTATCGGATTCACTGAGA 19772
Query 4317 AGACAGGAACCGTAAAGGGCAAACCTTTCAGCTTCGACCACAGAGAACACTTGTATGACG 4376
||| || || || ||||| ||| |||||| ||||||||| ||| ||||| | || |
Sbjct 19773 CGACTGGGACTGTCAAGGGTAAAGCTTTCAAGTTCGACCACCGAGGTCACTTACACGAGG 19832
Query 4377 TATACCGAGACAAGCATCCTCGTATAGTTATCGTTGCGGGGCGACAAGTAGAGAAATCCG 4436
| ||| ||||| || ||| | | || || || || || |||||||||||||| || |
Sbjct 19833 TCTACAGAGACCCTCACCCTAGAGTTGTCATAGTAGCTGGACGACAAGTAGAGAAGTCTG 19892
Query 4437 AGACAGTTAACCGACTCATTTTATTCCACGGTTACACGAGGGCTCATACCACTATTACAT 4496
|||| |||||||| | | | | |||||| ||| | | || ||||| || ||||| |
Sbjct 19893 AGACGGTTAACCGTTTGCTACTCTACCACGGATACCAGCGAGCCCATACTACGATTACCT 19952
Query 4497 ATACAGCACCACGGAACGAGCAAACGACTAGATTCGTAAACGACCGTTTCAGAAAATCAA 4556
| ||||| ||||| || |||||||| || | ||||| |||||||| || ||||| || |
Sbjct 19953 ACACAGCTCCACGTAATGAGCAAACAACACGTTTCGTCAACGACCGCTTTAGAAAGTCTA 20012
Query 4557 TTTCTAACTCTAATGGTGGCATTCTTGAAGG--TGATATCAACAAAAACCGAGATGCAAA 4614
| | ||||| ||| | || ||| | || || |||| || || || || ||
Sbjct 20013 TACAGGAATCTAAGCAGGGCTTACTCGAAAGAATGGTA--GACAAGAAGCGTGACGCTAA 20070
Query 4615 GACCGCCATAGCTTTGAAAAACAACACGACTTACTATTTTGGCTCCTCATGGTCTGATGG 4674
||| || || | | | ||| || |||||||||||||| | ||| |||| ||
Sbjct 20071 GACAGCTATTGGACTAATTAACTCTACAGTGTACTATTTTGGCTCAGCGTGGGCTGACGG 20130
Query 4675 GGATGCTCTCCGAGGTATTTCAGGTGACATGGTGTTCTTTGACGAGGTTCAGGACATCGG 4734
||||||||||| |||||| | || || || || | || || ||||| ||||| ||
Sbjct 20131 AGATGCTCTCCGTGGTATTGCTGGCGATATAGTTATGTTCGATGAGGTACAGGATATTAC 20190
Query 4735 GCAGACAGCCATTGAGTCAATCGAGAAGAGTATATCTCACTCA--GAGATTCAGGATGAC 4792
|||||||| || |||||||| |||| ||| | |||||| | |||||| | ||
Sbjct 20191 ACAGACAGCTATCGAGTCAATTGAGA--AGTCTGTCTCACATAGCGAGATTAAAGACCCT 20248
Query 4793 GTCACCGAGATAAACGGGCGTTGCTTCTATACGGGAACACCAAAGCAGAAGGGCTCCTAC 4852
|| || ||| | || || || ||||| || || || ||||| ||||| ||||| |||
Sbjct 20249 GTTACTGAGCTGAATGGTAAGTGTTTCTACACAGGTACGCCAAAACAGAAAGGCTCTTAC 20308
Query 4853 TATGATAAAGTCTTGTGGGGTAACTCTGACCAGAAGAAATGG---TCTGTGTGCTGTGAG 4909
|| || ||| | ||||| | ||| |||||||||||||| || ||||| |
Sbjct 20309 TACGACCGAGTACTCTGGGGACAATCTAACCAGAAGAAATGGAGCGTTGAGTGCTCT--- 20365
Query 4910 CAGTGTGGACACGAGCAATTTCTGTCTATCAAAAATATCATGGTTCAGAACGA---AAAT 4966
||||| ||| | |||||| || |||| ||||| | |||||| ||| || || |
Sbjct 20366 ---TGTGGTCACCACCAATTTATGACTATGAAAAACGTAATGGTTATGAATGAGGGAACT 20422
Query 4967 CAAGAAAACGAGCGGAGATACTTTGGATGCCTTGAGTGTAAAACCGAGCTGAACCGTGAG 5026
|| | ||||| | |||||||| || || |||||| ||| | ||||||||
Sbjct 20423 ---GACGAGGAGCGTCGCTACTTTGGCTGTCTGGAGTGTGGCGAGGAGTTAGACCGTGAG 20479
Query 5027 AATGGTCAATGGATTAAGACAAGACCAAACAATAAACGATACAGCGGTTACCTCTTTAAT 5086
||| ||| | || | ||| | || || ||||| || ||| | || ||
Sbjct 20480 CGTGGCTCGTGGGTAGTAACGAAACCTCATAACAAGATGTACAGTGGCTACTTGTTCAAC 20539
Query 5087 CAGCTCAACATGACTTGGATCAGTGCTAACCAAATCTGGCACGA--TTACAACAACATGG 5144
||||| || ||||||||||| ||||| ||||||||||||| || |||| || ||||
Sbjct 20540 CAGCTTAATATGACTTGGATTAGTGCAAACCAAATCTGGCGTGACTTTACGAC--TATGG 20597
Query 5145 ATGACATGACTTTCCACAACGAGGTACTGGGTGAGTTCTACTCTGGAGATGAACAACCGT 5204
| |||||| |||||||||||||||||||| ||||| || |||||||| |||||
Sbjct 20598 ACTCCATGACATTCCACAACGAGGTACTGGGAGAGTTTTATAGCGGAGATGAGCAACCAG 20657
Query 5205 TGTCCTATGAGGACGTGCTGGCTTGTACAGACAAGAATCTGTCTCTTCAAGATA-AATGC 5263
| || |||||| || || |||||| ||| | || | ||| |||| | |
Sbjct 20658 TAACCCTTGAGGATGTACTAGCTTGTTGTGACCGCACGCT-TAGCTTAAAGAGACGCTCT 20716
Query 5264 GACATCCCAACCGTCATGGGTATTGACTACGGCTCTGGTGGTCAGTCCAAAACGATCATC 5323
|||| ||||| || ||||| |||||||| || |||| || |||| ||||| || ||
Sbjct 20717 GACACGCCAACTGTAATGGGGATTGACTATGGTAGTGGTAGTAAGTCTAAAACAATTATT 20776
Query 5324 ACAATTGGTCAT 5335
|| |||||||||
Sbjct 20777 ACTATTGGTCAT 20788
Score = 385 bits (426), Expect = 2e-102
Identities = 775/1135 (68%), Gaps = 21/1135 (2%)
Strand=Plus/Plus
Query 6106 AAGAGATCGCCCTCATGAAAGATACAACTGGCGAGCTTCCAGATCAAGAGGATTTTAACC 6165
||||||| | ||| | ||||| ||| ||||| |||||| || || |||||||
Sbjct 21573 AAGAGATTGGTCTCTTTAAAGACGACACTTACGAGCGTCCAGACCAGTTAGACTTTAACC 21632
Query 6166 CAACAGATTTCTCCCTTGAAGTATACGACAAGATGATGACAGACGGGCAAGTTAAATCTG 6225
| |||| || ||||||||||| ||||| |||||||| ||||| || |||||| |||
Sbjct 21633 CCTCAGACTTTGACCTTGAAGTATGGGACAAAATGATGACCGACGGACAGGTTAAAGCTG 21692
Query 6226 CAATAGATATGATCAAACTTTCAGCGACAGCCAAAGGGTTCACCGTGACAGGTGACGATG 6285
|||||||||| || || || | || || ||||| | ||||||||||| |
Sbjct 21693 GCTTAGATATGATTAAGCTATCTTGCTCGGCTCGTGGCTTCACTATTACAGGTGACGACG 21752
Query 6286 AGGAAACTAAAAAGTATGCGGACTTCATCAATGAAAACTTTGAAATGATCAGAGGGAACA 6345
|||| |||||||||||||| || || || | |||||||| ||| | || ||||
Sbjct 21753 AGGAGACTAAAAAGTATGCTGAGTTTATTTCATATAACTTTGAGTCGATTCGTGGCAACA 21812
Query 6346 TGGAAGATGTACTCAAAGAGATTATGACAGCTCTTGAGTATGGCTACAGCTGTACAGAGA 6405
|||| || ||| | ||||| | ||||||| |||||||||||| ||| || |
Sbjct 21813 TGGAGGACGTAATTGGTGAGATGCTTTCAGCTCTAGAGTATGGCTACTCAGTTACGGAAA 21872
Query 6406 AAGTCTTTGAGTAC---AAAGACGGCAAGATCATGCTCAAGAAGCTAAAAACACTTGATC 6462
| || ||||||||| ||||| | ||||| | | |||||||| ||||| || || |
Sbjct 21873 AGGTATTTGAGTACGATAAAGATAGAAAGATAGTTTTAAAGAAGCTTAAAACGCTAGACC 21932
Query 6463 CATACAGTGTAGCTGGCAAGACCGACCGTTTTGGCGACCTCATGTATGTCAAACAGCGCA 6522
|| ||| || || |||| ||| ||||| || | ||||||| ||| |
Sbjct 21933 CACACAAGTTAACTTTAAAGATTGACAAGTTTGGTGATTTAGTGTATGTACGTCAGTCGA 21992
Query 6523 TTGG-CAGTAAGACCATTAAAATTCCTGCTGATAAAGTCTTGTGGTATGCTCACCAAAAA 6581
|||| ||| | || ||| | || || ||| ||| || | || ||| | ||
Sbjct 21993 TTGGTCAGCACGA-GATTGATATACCAGCTAGTAATGTGATTCTATACAGTCATGACAAG 22051
Query 6582 CGTTTTGGTAACATCTACGGTCAATCAAGACTTAGAACAGTGTACAAGCATTGGTTCATC 6641
|| ||||| ||| | |||||||| ||| || |||||||| |||||||| ||| ||||
Sbjct 22052 CGCTTTGGCAACCTTTACGGTCAGTCAGCTCTGAGAACAGTCTACAAGCACTGGCTCATT 22111
Query 6642 AAGGATAAGATGTACAGGTTCGCCAACATCGCTTATGAACGTTACGGTACACCCCTTTTA 6701
||||||||| ||||||| ||||| ||||| || || || ||||| || ||||| || |||
Sbjct 22112 AAGGATAAGCTGTACAGATTCGCTAACATTGCCTACGAGCGTTATGGAACACCGCTATTA 22171
Query 6702 GTCGGAACAGTTGAGGACAAAAACGATG-TGACAGATATGACACGCCTTTTAAAAAACAT 6760
||||| | ||| ||||| ||||||| ||||| | |||| | || || | | ||
Sbjct 22172 GTCGGTAAAGTACAGGACGCTAACGATGTTGACA-AAATGAATAGTCTATTGAGACGGAT 22230
Query 6761 CAATGGTATGACTGGTCTTGGTTTATCTGG---AGGCGCAAAAGTAGAGGCTATTCAGAC 6817
|| | |||||| ||| | ||||| || || | || | |||||||| |
Sbjct 22231 TAACAGCATGACTTCTCTGTCCATCTCTGGTCAAGACG---ACGTGAAAGCTATTCAAAT 22287
Query 6818 AACCAATGCGGATTTTATTGGTTACATTGAGCACCACGACAGAAAGATCATGGAAGCACT 6877
| || || || || |||||||||||||||||||| ||| | ||||| ||||| || |
Sbjct 22288 GAGTAACGCTGACTTCATTGGTTACATTGAGCACCATGACCGCAAGATTATGGAGGCTAT 22347
Query 6878 ACTTGTACCGCCAGCCCTTCTAGGGTTATC--TCGTGGTCAATCTGGATCATACTCACTG 6935
|| || || || | || || |||| ||| || || ||||| |||||| | ||
Sbjct 22348 GCTAGTTCCACCTATGTTGCTTGG--TATCGGTCGAGGACAGTCTGGCTCATACGCTCTT 22405
Query 6936 TCATCCAACCAATTTGATATTTTCATGATTCACCTTGAGAGC-ATCCAACGTGACATCAA 6994
| ||||| ||||| | ||||||| || || ||| | || |||||| | ||
Sbjct 22406 ACTAATAACCAGTTTGACGTATTCATGA-GCAGATTAGAAGCGTTACAGCGTGACTTGAA 22464
Query 6995 ATCTCTGATTGAGGAAGAGATAATCCGTCCATTGGTTGATTTAAACTTCCCGAATGTTAC 7054
| || |||||||| || | || | ||| | | || |||||||| || || ||||
Sbjct 22465 GGCGCTTATTGAGGAGGAAGTCATTAGACCACTAATCGACTTAAACTTTCCTAACGTTAA 22524
Query 7055 AAAGTACCCTGCTTTCACGTTTAAACCTTTAGCGGATCGA-GACATTGACAAGCTGTCAA 7113
|| |||||| | ||| || || | || | ||| |||||| | ||||| | |
Sbjct 22525 GAAATACCCTTCATTCCAATTCCGTCCACTTGC-TAACGAGGACATTCAAAAGCTTGCTA 22583
Query 7114 ATGTATTCGAGAAGTTGATCAGTGCATCCGTTATCGCTCCAGAGGAAGAATGGTTACGAG 7173
| |||||| | || |||| | || ||||| | | | ||||| |||||||| |
Sbjct 22584 ACGTATTCATGCAGATGATTACAGCTGGAGTTATTGATGCTAGTGAAGATTGGTTACGTG 22643
Query 7174 AAGAACTTGGGTTCCCTGTAATGTCCGAAGAGGTTCGTAAGTCTATCGAGGAACG 7228
| |||||||| ||||| | ||| ||| ||| |||||| |||| ||||| ||
Sbjct 22644 AGGAACTTGGCTTCCCAGCTATGAGCGAGGAGACACGTAAGGCTATTGAGGAGCG 22698
Score = 248 bits (274), Expect = 3e-61
Identities = 384/546 (70%), Gaps = 27/546 (5%)
Strand=Plus/Plus
Query 31304 TGGAATGCGTGACTTGTGCAAACAGGTTCAGCCTACCGAGTTCAAGCACATTGTAGCGAT 31363
|||||||| | || || ||| || |||||||| |||| |||| | ||||||||
Sbjct 199 TGGAATGCAACAATTATGTAAAGCTGTACAGCCTACTAAGTTTGAGCATCTCGTAGCGAT 258
Query 31364 TAATGCCCTGTACCGTCCACCAGCTTTAGCCTCTGGAGATACTTGGAGGTATGCCAACAT 31423
|| || ||||| | |||||||| ||||| |||||| |||||||| || || ||||
Sbjct 259 TACAGCATTGTACAGACCACCAGCATTAGCTAGTGGAGACACTTGGAGATACGCTGACAT 318
Query 31424 CAAGAATGGCAGAGAAGAGGAGCGATACAGTCACCCAGAAGAAAAGGAAATCACTGGTGA 31483
|||||||| | || ||||||| ||||| |||||||| || ||| || || |||||
Sbjct 319 TAAGAATGGTAAAGCTGAGGAGCATTACAGCCACCCAGACGAGAAGCGCATAACAGGTGA 378
Query 31484 AACTTACGGGGTTATTACCTACCAAGAGCACGTTATGCAACTTGTTCACCACTTCGCTGG 31543
|| | || || ||||||| |||||||||||||||| | |||| ||| || |||||
Sbjct 379 GACCTTTGGAGTCATTACCTTCCAAGAGCACGTTATGGAGATTGTACACTCATTTGCTGG 438
Query 31544 CTGGGATTACGGACGAGGCGATAAACTCCGCAAGATGAGTGCAGAACAACTTGAGGGAAT 31603
|||||||| ||||||||||| ||||| || ||| ||||| || ||||||| | ||
Sbjct 439 TTGGGATTATGGACGAGGCGACAAACTACGTAAGGCTAGTGCTGAGGAACTTGAAGCTAT 498
Query 31604 CCGTGAAGAGTTCTTGGCAGATTGTCACGCCAATGGTTATAACTCAGATGATGAACAATG 31663
|| |||||| | | ||| | || | || ||||| | || | |||| |
Sbjct 499 GCGCTCAGAGTTTATTGAGGAT--GCTTGCAAGAAGT----ACTCACACGACGCACAACG 552
Query 31664 --CGG------GCTAT-------ATGAGTTATGGGATCGAATCGTTCAGTACATGGGTTA 31708
| | ||| | ||||| | ||| ||| || || ||||||||||||||
Sbjct 553 AACAGCTTTTCGCTCTCAGATGGATGAGCTTTGGAGTCGTATTGTACAGTACATGGGTTA 612
Query 31709 CGGTTTCAACAAATCGCACGGAGTAGCTTACTCAATGCTTACTTACCTTACAGTGTACCT 31768
||||||||| || || ||||||||||||||| | ||| ||||||| | |||| | ||
Sbjct 613 CGGTTTCAATAAGTCCCACGGAGTAGCTTACACTATGATTACTTATATGACAGCATGGCT 672
Query 31769 TGAGCATTACTATCCAGAACACTATATGTCAGCGATCCTGACGAG---TAAAATGTCAGA 31825
||||| ||| ||||| |||| | ||| || | ||| ||||||||||||
Sbjct 673 AGAGCACCACTTCCCAGAGCACT---TCCAAGCCTCACTAATGAGTACTAAAATGTCAGA 729
Query 31826 CCAAGA 31831
| ||||
Sbjct 730 CAAAGA 735
Score = 224 bits (248), Expect = 3e-54
Identities = 432/629 (69%), Gaps = 16/629 (3%)
Strand=Plus/Plus
Query 28087 GAAAGTTTATTGAACGCATGATGAGGAAGCAAGACAAAAAGGAG---CTTCCTACATTCA 28143
|||||||||| |||| |||| |||||| | ||||| || | || || | ||||
Sbjct 43911 GAAAGTTTATCGAACAAATGA---GGAAGCGACACAAACAGCACACTCTACCAGCTTTCA 43967
Query 28144 AAATGCCTAGAATGAAACTAGCAAAGGTCACATCATACAGAGGGTACTCACAAGAGACTA 28203
| || | | ||||| | || || || | || ||||| ||||||||||| |
Sbjct 43968 AGATTCAAAATATGAAGTTTGCTAAAGTGAACGACTATAGAGGTTACTCACAAGAAGCGC 44027
Query 28204 TCTCACAC-TGGAAGTTTTT-TCTTGCTAAAGATGGAGAGTTACAAGACAGGATTATAAT 28261
| | || ||||| | | |||| | ||| || || | ||||||| || | ||
Sbjct 44028 T-TGACTGGTGGAAAATACGATATTGC-ACAGAAGGCGAACTCAAAGACAGAATAGTCAT 44085
Query 28262 TCCGTTTGAAGATGTAGATAATCGCCTTGTTGGTATCACTGGTAGAGCAACCAAAGCAGA 28321
| | ||||||||||| || | ||||| || || ||||| |||||||||||||||||
Sbjct 44086 GGCTCTGGAAGATGTAGACAAAAGACTTGTAGGCATAACTGGGAGAGCAACCAAAGCAGA 44145
Query 28322 TCAACAAGAGAAGTTCATGCACCGACCAAGAAACTTACACACAGGATTTTTCCTCACAGG 28381
||| || ||||||||||| || || |||||||||||||| || | || ||||||||
Sbjct 44146 ACAAGTGGAAAAGTTCATGCATCGTCCTAGAAACTTACACACTGGTTACTTTCTCACAGG 44205
Query 28382 GTTGGGGAGAAAC---AAAAAGTTCCTTGAGGAATACGGCTATACGGTTAAAATCGTCGA 28438
| | || |||||| ||| | ||| || | | || | || ||||| || || ||
Sbjct 44206 GCTTGGTAGAAACTTGAAATATGTCCAAGAAGCAAACAAC---ACAGTTAAGATTGTAGA 44262
Query 28439 AGGTGTTTTTGATTGTGCTCGCTGGTATGACTCAGGACATAAAAACGTTTGCGCTCCTAT 28498
|| ||||||||||||||||||||| ||||| || |||||||| || ||| ||| ||
Sbjct 44263 GGGGCTTTTTGATTGTGCTCGCTGGTGGGACTCTGGTCATAAAAATGTATGCTGTCCAAT 44322
Query 28499 CGGGGTATTCTTCACAGAAGAACACATTGAGCAATTATACAAAGCTGGTGTGATCGGTCT 28558
|| || |||||||| || || || || ||| | || || || ||||| | |||
Sbjct 44323 TGGAGTGTTCTTCACCGAGGAGCATATCTTACAACTCTATAAGGCAGGTGTAACAACTCT 44382
Query 28559 CGATTTTGGGTTCGACAATGATCCAGCTGGACGCAACGGAATAAGAAGAGCAATCAAGAG 28618
|| | || || ||||||||| ||| || || |||||| | | | || | | |
Sbjct 44383 TGAAATCGGTTTTGACAATGATAAAGCAGGTCGTAACGGATTTCGTAAGGCGTACCAAAA 44442
Query 28619 AGCTAAGTATAAGTTTGATATAAACGTCCTAGTTTACCCAGAAGGTAAGGACGCTGATGA 28678
||| || ||||||||| | | ||| | ||||||||||| | || ||||| ||
Sbjct 44443 AGCCAAAGGTAAGTTTGAGGTCTATTACCTTATGTACCCAGAAGGGCAAGATGCTGACGA 44502
Query 28679 CTGCACCAAAGAAGAACTCGACGAGGTAG 28707
| ||||||||||||||| | ||||
Sbjct 44503 TTTGCGAAAAGAAGAACTCGACAAAGTAG 44531
Score = 161 bits (178), Expect = 3e-35
Identities = 207/276 (75%), Gaps = 7/276 (3%)
Strand=Plus/Plus
Query 11225 AAGAACAAGAACATCCGTGACGCATTCCGTCAGAATAACACTGATCTAGTTTTACTTCGT 11284
|| || |||| ||| ||||| || |||||| |||| ||||| ||| | | ||| | |||
Sbjct 26860 AACAAAAAGA-CATTCGTGATGCGTTCCGTGAGAACAACACAGATGTTGCTTTGTTACGT 26918
Query 11285 GGATATCTTGGAGACTTCATGGGTCTTAGC-TTTATCGTTGATTCTCACTTTGAGGCTGA 11343
|| ||| |||| ||||||||||| |||| | || |||| ||| |||||| || ||
Sbjct 26919 GGCTATATTGGCGACTTCATGGG-CTTATCGTTCATCGAGGATGAAAACTTTGCGGATGG 26977
Query 11344 CAACGCTTTGATCCTTGAAAAGAAAGTC-ATTGGTGACATCGCTGACGCTGATCCACTTC 11402
||| ||| || | || || |||| | || ||||| || ||||||||||| | |
Sbjct 26978 TGACGTATTGTTCGTAGAGAA-AAAGACTATCGGTGAAATTGCTGACGCTGAGGGCTTAC 27036
Query 11403 GTACAAAAACGTACAATGAGGACAGCA-ACGATCGTACTATCGTTCGTGCAACTCGTTTC 11461
|||| || ||||| ||||| |||| | || ||||| || || ||||||||||| | |
Sbjct 27037 GTACTAAGGTATACAACGAGGA-AGCAGAAGACCGTACGATTGTACGTGCAACTCGCTAC 27095
Query 11462 ACTAATGCTTACTTAACAGACCCTAAAGCGGTTTAC 11497
||| | |||||| |||||||||||||||||||||||
Sbjct 27096 ACTCAAGCTTACCTAACAGACCCTAAAGCGGTTTAC 27131
Score = 143 bits (158), Expect = 8e-30
Identities = 418/639 (65%), Gaps = 16/639 (3%)
Strand=Plus/Plus
Query 26902 AGTGAAAAAACTTGGCGAGGGTATCAAGGAAAGAATGAAGGAACGAGCTAAAAACCCAAT 26961
||| ||||| || || || ||||| || || | || ||||||| || |||
Sbjct 42525 AGTTAAAAAGCTAGGGGAAGGTATTGGAGAGCGACTCAAACAACGAGCCTTGAAGCCACA 42584
Query 26962 GGATGTAATTGGCATCAAAACTGGATGGGCTCCATTCGATTTAGCCGCAAGGGGTTTGGT 27021
|| || || || |||| || |||||| | ||||| |||||| | ||||| ||
Sbjct 42585 AGACGTTATAGGACTCAAGACAGGATGGCACGCTTTCGACTTAGCCTCTCAAGGTTTAGT 42644
Query 27022 CAATGGAGAGCTTACTGTAGTAGGAGCTAGACCAAAGGTGGGTAAATCAACAGTCTTACT 27081
| || ||| | ||| | ||||||||| | | || || ||||| || ||| |||||
Sbjct 42645 TATCGGTGAGTTGACTATCGTAGGAGCTCGCTCCAAAGTCGGTAAGTCTACAACGTTACT 42704
Query 27082 CAATTGGAGCAAAAAGATATGTCATGAAGATGGTATACCTCTTTTGTACATCGACACAGA 27141
|| ||| | |||||||| ||| ||| || || ||||| ||| || |||||||| ||
Sbjct 42705 AAACTGGTGTAAAAAGATTTGTGTTGACGACGGAGTACCTACTTTATATATCGACACTGA 42764
Query 27142 GAATTATACTCATGAGCAAGAAGACAGGTTGCTTTCATTGATATCTGGTGTTGACCATAC 27201
|| || || ||||| ||||| | | | || | || ||||| || | ||
Sbjct 42765 GATGTACGACCACGAGCAGGAAGATAAGCTACTGAGTATTATCTCTGGAGTCCAGCACCA 42824
Query 27202 AGAAATTGAAAATGGTCAATTTGCAAAAGACACCTTCAATGGAAAAGCCAAAGACAAACT 27261
||||| ||| ||| | ||||| | || ||||| | ||| || ||
Sbjct 42825 TGAAATACGAAACGGTTACTTTGCTCGTAATACGGAGTTTGGAACTGGCAAGGAGAAGGC 42884
Query 27262 AAAAGCTGTAGCAGAGGCAACTAAAGTGATCGAGTCAGGAAA----CTTT-TATCATGTG 27316
|||| || ||||| || | ||| | ||| ||| ||| |||| || || |
Sbjct 42885 TGAAGCGGTTGCAGAAGCTAGTAAGGCTATC---TCA--AAAGCTCCTTTCTACCACATC 42939
Query 27317 TACCTTCCATTCTTCACACCTGAGAAGATTGAACACATCGTCAGAGAGTACCAGATCAAT 27376
|| | ||| ||| || | |||| | | | | ||| || ||||||| |
Sbjct 42940 TATATGCCAAACTTTACGTTAGCCGAGATAGCCAGCGTAATTAGAAAGCACCAGATAGAA 42999
Query 27377 CACGGAATCAAGCTAGTATGCTTCGATTACATCAAACTCCCT---TCAAGTGACAGCAAG 27433
||||| || |||| ||| ||| |||||||| || || || |||| |||| ||
Sbjct 43000 CACGGTATACAGCTCGTAGTCTTTGATTACATTAAGCTACCAAGCTCAA---ACAGTAAC 43056
Query 27434 TTGGGTGACAAAGAGTGGCAACAACTAGGGTACTTGACAAGTAAACTAAAAGACTTAGCT 27493
|| || ||||||||||||||| || || ||| | |||||| ||||||||||||||||
Sbjct 43057 TTAGGAGACAAAGAGTGGCAAGCTCTTGGATACCTTACAAGTGGACTAAAAGACTTAGCT 43116
Query 27494 GGTATGACACAGCTACCAATCATATCTGCTGTACAGTTA 27532
||| || |||| | ||||| || ||||||||||||
Sbjct 43117 GGTCTGTTACAGATTCCAATAGCGTCAGCTGTACAGTTA 43155
Score = 102 bits (112), Expect = 3e-17
Identities = 166/238 (70%), Gaps = 6/238 (3%)
Strand=Plus/Plus
Query 16881 CTGGTAAGGGATTACTTGATGCTTTCACTAAGGGTATCAAGTCAGGTATTAGCGGA---G 16937
||||||| || || || | |||||| | || || |||||| ||| |||| |
Sbjct 32476 CTGGTAAAGGCTTGATTAACGCTTTCGTAGATGGCATTAAGTCAACTAT---CGGAAACG 32532
Query 16938 CTATCGGGGCAGTCAAAAACGGTATGTCTGCCATTCGTAAATTCTTGCCGTTCTCTCCTG 16997
|| | | || ||| |||||||| || | |||| | ||| || ||||| || |
Sbjct 32533 CTGTGAGCGCTGTCTCTGACGGTATGGCTAAAGTACGTAGTTACTTACCATTCTCACCAG 32592
Query 16998 CCAAAGAGGGGCCTTTGAGTGATCTTGACAAGTCTGGTGAGTCATTCTTCCCAACTTGGT 17057
|||| | || || | || || || ||||| |||||| |||||||||||||||| ||||
Sbjct 32593 CCAAGAAAGGTGCTCTAAGCGACCTAGACAAATCTGGTAAGTCATTCTTCCCAACATGGT 32652
Query 17058 ACGAGGCGGCACTCAAGCAAGTTCGCCCTATGGAGCGAGCTGTTGGGGGTGCTATGAG 17115
||||| | || || | |||||| | || ||| | ||||| | || || ||||||||
Sbjct 32653 ACGAGTCAGCTCTAACTCAAGTTAGACCAATGACGAGAGCTATCGGTGGAGCTATGAG 32710
Score = 96.9 bits (106), Expect = 1e-15
Identities = 301/458 (66%), Gaps = 6/458 (1%)
Strand=Plus/Plus
Query 43613 GAACCAGAGGAAGCACTAAACACCTTAAAGGATGCTTATGAGGCAATGAGGGGCATCCAG 43672
|| ||||||||||| ||| | || | | | |||||||||| ||| | | |||
Sbjct 9716 GAGCCAGAGGAAGCGCTACAGGCCCTCAGAAAGGCTTATGAGGGTATGCGTAAAGTACAG 9775
Query 43673 AGGGCTCTCAGAGCTAAAGGCAAAAAGAGTGTTCAGGAAGCTGGCATAAAAGATCGCCAC 43732
| |||| | || ||||| |||| || || || || || | | || |||
Sbjct 9776 GAGCAACTCAAGGAGAAGGGCAAGAAGAAAGTCCAAGATGCAAATATCTATAAGCGACAC 9835
Query 43733 TTTGTCATCATTGACGAGGTAGGGGAGCTTAACCCCTCTGAGGCTGTCTCGAAAGAAGAG 43792
||||| || |||||||||||||| ||||| ||||| | || || | |||| |||
Sbjct 9836 TTTGTTATTATTGACGAGGTAGGAGAGCTCAACCCAGCAGAAGCAACCGACAAAGCAGAT 9895
Query 43793 CGCAAAATCAAAGAGGAATGTCAGAAGTACATGTCACAGATAGCACGGCTTGGAGCTGGC 43852
|| |||||||||| |||||| |||||| || ||||| || ||||| |||||
Sbjct 9896 AAGAAGCTCAAAGAGGAGTGTCAGCGCTACATGAGTCAAATAGCTCGCCTTGGTGCTGGT 9955
Query 43853 TTGGGGTTCCGTCAGATTTTAGCCACTCAGTACACCACGGGAGATGTCATCCCTAGA-CA 43911
|| || | | | || |||| || |||||| | || || || || || |||||| |
Sbjct 9956 TTAGGATATAGACTAATAGTAGCTACACAGTACCCAACTGGGGACGTTATTCCTAGAGCT 10015
Query 43912 GTGTAAACAAAACAGCGATGCGAAAGTATGCTTCCGTGTACAAAGTGAGGTAGCCAGCAG 43971
|| || || || | || | || ||||||| || |||| | | ||||||
Sbjct 10016 GT-CAAGCAGAATTGTGACGTTAAGATATGCTTTCGAGTACGTAACGCTACAGCCAGTCA 10074
Query 43972 GGTTACACTTGACAGTTCAGGAGCCGAGAAGTTACCAGAAATCAGAGGGCGTGCTCT-GT 44030
||| |||||| |||||| || ||| | |||| || | ||| || ||| | ||
Sbjct 10075 AGTTGTACTTGATGAGGGAGGAGCTGAAAAGCTTCCAGCTATTAAAGGTCGAGCTATCGT 10134
Query 44031 ACCAGACAGCAGACAAAAGGAGGACTA-TCCAGACATA 44067
| || ||| ||| || ||| | || ||||||||||
Sbjct 10135 A-CAATTAGCTGAC-AAGCGAGAAATACTCCAGACATA 10170
Score = 86.0 bits (94), Expect = 2e-12
Identities = 85/110 (77%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 10637 TAAATGGCTGATTTCGTACTAGGTCAACACCCAATGTTGAGAAAAGTATTCTTAGATAGA 10696
|||||||||||| ||||| |||||||||||| ||||||| ||||| ||| |||| | |
Sbjct 26292 TAAATGGCTGATATCGTATTAGGTCAACACCAGATGTTGAAAAAAGAATTTGTAGACAAA 26351
Query 10697 CGCATCAAAGATTTCACTGATAGTCAATTCGTTGCAGACCAACTGTTCAC 10746
|| || | || ||| | || | | | ||||| || |||||| | |||||
Sbjct 26352 CGTATTAGAGGTTTGATTGGTCATAATTTCGTAGCTGACCAATTATTCAC 26401
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 158847918042128
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |