Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_022766.1 Length=49246 Score E Sequences producing significant alignments: (Bits) Value seq78791 767 0.0 seq222169 136 1e-27 >seq78791 Length=51567 Score = 767 bits (850), Expect = 0.0 Identities = 1998/2999 (67%), Gaps = 122/2999 (4%) Strand=Plus/Plus Query 3240 CAGCAGAAGAAATAAAGAAAATGCGTAACATTTTACGTGATCCAGTAGGCTTTACCGAGA 3299 ||||||| || | ||||| ||||| ||| || | | || || | || || || |||| Sbjct 19713 CAGCAGAGCAACTCAAGAAGATGCGGAACGTTATGAGAGACCCTATCGGATTCACTGAGA 19772 Query 3300 AGACAGGAACCGTCAAGGGTAAACCCTTCAAGTTTAAACACCGAGAGCACTTGTATGATG 3359 ||| || || |||||||||||| | |||||||| | ||||||| ||||| | || | Sbjct 19773 CGACTGGGACTGTCAAGGGTAAAGCTTTCAAGTTCGACCACCGAGGTCACTTACACGAGG 19832 Query 3360 TATACCGAGACAAGCACCCTCGTATAGTCATCGTAGCAGGTCGTCAGGTTGAGAAGTCCG 3419 | ||| ||||| |||||| | | ||||| ||||| || || || || |||||||| | Sbjct 19833 TCTACAGAGACCCTCACCCTAGAGTTGTCATAGTAGCTGGACGACAAGTAGAGAAGTCTG 19892 Query 3420 AGACAGTAAACCGCCTCATCCTTTTTCATGGATACACGAGACCGCACACAACCATTACAT 3479 |||| || ||||| | | || | || |||||| | || | || || || ||||| | Sbjct 19893 AGACGGTTAACCGTTTGCTACTCTACCACGGATACCAGCGAGCCCATACTACGATTACCT 19952 Query 3480 ACACGGCACCTCGTAACGAGCAAACAACCCGTTTTGTCAACGACCGTTTTAGAAAGTCCA 3539 |||| || || ||||| ||||||||||| ||||| ||||||||||| ||||||||||| | Sbjct 19953 ACACAGCTCCACGTAATGAGCAAACAACACGTTTCGTCAACGACCGCTTTAGAAAGTCTA 20012 Query 3540 TTGCA--ACTTCAAACGGAGCTGTACTTGAAGGAGATGTCAACAAAAACCGAGATGCAAA 3597 | || | | || | | ||| |||| ||| || || |||| || || || || || Sbjct 20013 -TACAGGAATCTAAGCAGGGCT-TACTCGAAAGAATGGTAGACAAGAAGCGTGACGCTAA 20070 Query 3598 GACAGCTATCGGGCTAAAGAACAACACAACGTACTATTTTGGCTCCTCATGGGCTGATGG 3657 ||||||||| || |||| ||| ||| ||||||||||||||| | |||||||| || Sbjct 20071 GACAGCTATTGGACTAATTAACTCTACAGTGTACTATTTTGGCTCAGCGTGGGCTGACGG 20130 Query 3658 AGATGCCCTCCGAGGTATCTCAGGGGATATGGTGTTCTTTGACGAGGTTCAGGACATCGG 3717 |||||| ||||| ||||| | || ||||| || | || || ||||| ||||| || Sbjct 20131 AGATGCTCTCCGTGGTATTGCTGGCGATATAGTTATGTTCGATGAGGTACAGGATATTAC 20190 Query 3718 GCAGACAGCCATTGAGTCAATTGAGAAGAGTATTTCCCACTCAGAGATACAGGATGCGGT 3777 |||||||| || ||||||||||||||| | | || || ||||| | || | || Sbjct 20191 ACAGACAGCTATCGAGTCAATTGAGAAGTCTGTCTCACATAGCGAGATTAAAGACCCTGT 20250 Query 3778 AACCGAGATAAACGGACGTTGCTTCTACACGGGAACACCCAAACAGAAGGGCTCCTATTA 3837 || ||| | || || || |||||||| || || || |||||||| ||||| || || Sbjct 20251 TACTGAGCTGAATGGTAAGTGTTTCTACACAGGTACGCCAAAACAGAAAGGCTCTTACTA 20310 Query 3838 CGACAAAGTCCTCTGGGGTAACTCTGATCAGAAGAAATGGTCAGT---ATGCTGTGAGAA 3894 |||| ||| |||||||| | ||| | |||||||||||| || |||| | Sbjct 20311 CGACCGAGTACTCTGGGGACAATCTAACCAGAAGAAATGGAGCGTTGAGTGCTCT----- 20365 Query 3895 ATGCGGTCATGATCAGTTCTTGTCGATGAAAAACGTCATGGTTCAAAACGAAAAAGAAGA 3954 || ||||| | || || || | ||||||||||| |||||| || || | || Sbjct 20366 -TGTGGTCACCACCAATTTATGACTATGAAAAACGTAATGGTTATGAATGAGGGAACTGA 20424 Query 3955 AAATGAGCGGAGATACTTTGGATGCCTTGAGTGTGAAGCAGAATTGAACCGTGAGAATGG 4014 | ||||| | |||||||| || || ||||||| | || || |||||||| ||| Sbjct 20425 CGAGGAGCGTCGCTACTTTGGCTGTCTGGAGTGTGGCGAGGAGTTAGACCGTGAGCGTGG 20484 Query 4015 ACAATGGGTCAAAACACGACCAAACAACAAGCGTTACAGCGGGTACCTGTTCAACCAGCT 4074 ||||| ||| ||| | |||||| ||||| || ||| ||||||||||||| Sbjct 20485 CTCGTGGGTAGTAACGAAACCTCATAACAAGATGTACAGTGGCTACTTGTTCAACCAGCT 20544 Query 4075 CAATATGGCATGGATCAGTGCCAATCAAATCTGGCACGACTATAACAACATGGATGACAT 4134 |||||| | ||||| ||||| || |||||||||| |||| || | ||||| ||| Sbjct 20545 TAATATGACTTGGATTAGTGCAAACCAAATCTGGCGTGACTTTACGACTATGGACTCCAT 20604 Query 4135 GACCTTCCACAACGAGGTGCTAGGGGAATTCTACTCTGGAGACGAACAACCACTTTCTTA 4194 ||| |||||||||||||| || || || || || ||||| || |||||| | | Sbjct 20605 GACATTCCACAACGAGGTACTGGGAGAGTTTTATAGCGGAGATGAGCAACCAGTAACCCT 20664 Query 4195 CGAGGACGTACTTGCTTGTACAGATAAGA-GCTTGTCCTTGCAAAGCAAATGTGACATCC 4253 ||||| ||||| |||||| || | |||| ||| | || | ||||| | Sbjct 20665 TGAGGATGTACTAGCTTGTTGTGACCGCACGCTT-AGCTTAAAGAGACGCTCTGACACGC 20723 Query 4254 CAACTGTAATGGGTATTGACTATGGCTCTGGCGGTCAATCCAAGACAATTATCACAATTG 4313 ||||||||||||| ||||||||||| ||| || | || || |||||||| || |||| Sbjct 20724 CAACTGTAATGGGGATTGACTATGGTAGTGGTAGTAAGTCTAAAACAATTATTACTATTG 20783 Query 4314 GTCATGAAACAATGCACAAAGGCAAGAAAAAACTCTTGTTGGTTCACATGGAGAGCGCTC 4373 ||||| || | || || || || | | ||||| |||||| Sbjct 20784 GTCAT------------AATTGGGAGGGTAAGCTTGTGATTGACCACATTGAGAGC-TGG 20830 Query 4374 CTAACATGGATACAGACGA-TCGTATTGCTTATAT---CAACTCTTTG-----------A 4418 ||| || |||| |||| | | | | | || |||||| ||| | Sbjct 20831 CTACCA--GATAAAGACAACCCAGACAACCAACATGACCAACTCATTGAGTATCTGTGCA 20888 Query 4419 AGC-ACAA-----ATACAATGTCCAGAAGATCAATGGTGATATTGGGTATGGTCAATACG 4472 ||| |||| ||||| || |||| || ||||| || || || ||| |||| Sbjct 20889 AGCTACAAGCCATCTACAACGTTGAGAAAATAGTCGGTGACATCGGTTACGGTTCTTACG 20948 Query 4473 AG--GGGGAATCCTTCTATGCCATGTACGGAAGAGAAGCCATCTCTACAAGATACGTAAC 4530 || ||| | | |||| ||| || || || | || ||||| |||||||| || Sbjct 20949 AGTCTCAGAAGC--TATATGGCATCTATGGTAGGAACGCTATCTCATGTAGATACGTTAC 21006 Query 4531 CTACCAGACTAACCCTAAGAAGCGTGA-AATAAAAGA-TAAATTCGTC----CTACAAGT 4584 || || | |||| ||| ||||| ||||| || | ||| || ||||| || Sbjct 21007 GTATGCGAATGACCCACGGAAACGTGAGTATAAAGGATTCAATAACTCAACTCTACAGGT 21066 Query 4585 AGACAGAACGTTCTCGATGGACTCACTTA-TCATGGCTTTCAAGCGTGGAGAGATCGTCA 4643 |||| | || ||||| ||||| |||| | || || || || | | || || | Sbjct 21067 AGACCGTACTTTCTCAATGGATAAGCTTATTGATATGTTCCATAAGTCTA-ACATAGTTA 21125 Query 4644 TCCCTTACAGTGACCCAGATAAGGTAGAAATGTTCTTTGACCACTATACAGCCATTGAGG 4703 | || |||| | ||||| |||| || |||||||||||||| ||||| ||||| Sbjct 21126 TTCCGTACAAGCAACCAGAGGAGGTTGAGTACTTCTTTGACCACTACACAGCTATTGAAA 21185 Query 4704 CGGTCTTCTCAGAGTC-AACTCAAGGTACTGGACGCAAGAGATACGACCACAGAACACCA 4762 | | ||| | ||||| ||| | || || |||| || |||||| | || ||| Sbjct 21186 TGATATTCACCGAGTCGAACAC-TTCCACAGGTGTTAAGAAGTATGACCACCGTACTCCA 21244 Query 4763 GACGATGCATTCCACTCCCTGAACTATGTCCGTGAGGGCATCTTCGAGATCAACAATAAA 4822 ||||||||||||||| | ||||||| || | ||||| || |||| | | || Sbjct 21245 GACGATGCATTCCACAGCTTGAACTACGTTAGAGAGGGTATTCACGAGCTTACTAACCGT 21304 Query 4823 TTCGAATGGGACGGCGCTCAGAGAGA-AAGCTG-GGGAGAAGAAAAACTATTGAAACATG 4880 ||||| |||||| | |||||| | | || | ||| | ||| || || | Sbjct 21305 TTCGA--GGGACGATACAACGAGAGAGACGTTGACCCTGTAGACAGACTGTTTGAAGACC 21362 Query 4881 ACATTGATTTACC----------GTCAGAAAACGAGTGGTGATGTTTACTTTGTACTACA 4930 || || ||||| ||| |||| | | || |||| | || || | | Sbjct 21363 ACGGAGACTTACCTACTTGGTAGGTCTCTAAAC-ACTAGT-TTGTTAAATT--TAATGAA 21418 Query 4931 ATATAGTGAGTCAAAATATAGCTGGATTCTCCCT---TAG-GAGATCAGAAGGC-AGGAG 4985 | || | | | | | ||| | ||||||| || || |||| |||||| | ||||| Sbjct 21419 ACCTA-TTAATTATACTAT-GTCGGATTCTTGCTGTCAAGCGAGACCAGAAGACTAGGAG 21476 Query 4986 GCATAACAATGGGATTTTTCGACAAATTTAAACGAAACAAAGAAGACAAAACGGAAA-AG 5044 | | ||| |||||| | || || |||||| | | ||| | | | ||||| Sbjct 21477 GGAAAACTATGGGAATGTTTGA-TAATTTA---GCTAAAAATATGCC---TTGGAAAGTA 21529 Query 5045 TATGCAGAG-------GAGCTGACTGACCTTGCCAATGCAATGTTCAAAGAGATAGCTCT 5097 ||||| ||| ||||||| || || || | || || ||||||| | ||| Sbjct 21530 TATGCTGAGAAGAAGAGAGCTGA-GGAGCTCATTAA--GATTGGTC-AAGAGATTGGTCT 21585 Query 5098 TATGAAAGATACAACAAGCGAGCTACCAGACCAAGAGGACTACAATCCGACAGACTTCTC 5157 | ||||| || ||||| |||||||| |||| || || ||||||| Sbjct 21586 CTTTAAAGACGACACTTACGAGCGTCCAGACCAGTTAGACTTTAACCCCTCAGACTTTGA 21645 Query 5158 TCTCGAGGTATACGAAAAGATGCTCACAGATGGTCAAGTTAAGTCAGCCCTTGACATGAT 5217 || || |||| || || ||| | || || || || ||||| | | | | || ||||| Sbjct 21646 CCTTGAAGTATGGGACAAAATGATGACCGACGGACAGGTTAAAGCTGGCTTAGATATGAT 21705 Query 5218 CAAGCTATCAGCAACCGCAAAAGGCTTCACCGTAACAGGTGACGACGATGAGTCTAAAAA 5277 |||||||| | || |||||||| | |||||||||||||| ||| ||||||| Sbjct 21706 TAAGCTATCTTGCTCGGCTCGTGGCTTCACTATTACAGGTGACGACGAGGAGACTAAAAA 21765 Query 5278 GTATGCCGACTTCATCAATGAGAACTTTGAAATGATCAGGGGCAACATGGAAGATGTACT 5337 |||||| || || || | |||||||| ||| | ||||||||||| || ||| | Sbjct 21766 GTATGCTGAGTTTATTTCATATAACTTTGAGTCGATTCGTGGCAACATGGAGGACGTAAT 21825 Query 5338 CAAAGAGATCATGACAGCCCTTGAGTATGGTTATAGCTGTACAGAGAAGGTCTTCGAGT- 5396 ||||| | |||| || |||||||| || ||| || ||||| || |||| Sbjct 21826 TGGTGAGATGCTTTCAGCTCTAGAGTATGGCTACTCAGTTACGGAAAAGGTATTTGAGTA 21885 Query 5397 --ATAAAGATGGCAAGATCATGCTCAAGAAGCTGAAAACACTTGACCCTTATAGTGTAGC 5454 |||||||| | ||||| | | |||||||| ||||| || ||||| | | || | Sbjct 21886 CGATAAAGATAGAAAGATAGTTTTAAAGAAGCTTAAAACGCTAGACCCACACAAGTTAAC 21945 Query 5455 AGGCAAGACGGATCGTTTTGGCGATCTCATGTATGTCAAACA-ACGCATCGGAAGCAAAA 5513 |||| || ||||| ||| | ||||||| || || | | |||| | Sbjct 21946 TTTAAAGATTGACAAGTTTGGTGATTTAGTGTATGTACGTCAGTCGATTGGTCAGCACGA 22005 Query 5514 CAATCAAAATACCTGCTGATAAAGTCTTATGGTATGC--CCATCAAAAACGCTTTGGTAA 5571 || | ||||| ||| ||| | | || ||| | ||| | || |||||||| || Sbjct 22006 -GATTGATATACCAGCTAGTAA--TGTGATTCTATACAGTCATGACAAGCGCTTTGGCAA 22062 Query 5572 TATCTACGGTCAATCCAGACTAAGAACGGTGTACAAGCACTGGTTCATCAAAGATAAAAT 5631 | |||||||| || || ||||| || |||||||||||| |||| || ||||| | Sbjct 22063 CCTTTACGGTCAGTCAGCTCTGAGAACAGTCTACAAGCACTGGCTCATTAAGGATAAGCT 22122 Query 5632 GTACAGATTCGCCAACATTGCTTATGAGCGCTATGGTACGCCCCTTTTAGTTGGATCAGT 5691 |||||||||||| |||||||| || ||||| ||||| || || || ||||| || ||| Sbjct 22123 GTACAGATTCGCTAACATTGCCTACGAGCGTTATGGAACACCGCTATTAGTCGGTAAAGT 22182 Query 5692 AGAGGACAAAAATGATGTACCTGAGATCACACGCCTTTTGAGAAACATCAATGGTATGAC 5751 | ||||| || ||||| | || | | || |||||| || || | ||||| Sbjct 22183 ACAGGACGCTAACGATGTTGACAAAATGAATAGTCTATTGAGACGGATTAACAGCATGAC 22242 Query 5752 TGGACTAGGACTATCTGGCGGAGCTGATGTAAAAGCTATTCAGACAACTAACGCAGACTT 5811 | || | ||||| || || || ||||||||||| | | |||||| ||||| Sbjct 22243 TTCTCTGTCCATCTCTGGTCAAGACGACGTGAAAGCTATTCAAATGAGTAACGCTGACTT 22302 Query 5812 CATTGGATACATTGAGCACCACGACCGCAAGATCATGGAATCACTCCTTGTACCGCCATC 5871 |||||| |||||||||||||| ||||||||||| ||||| | | || || || || Sbjct 22303 CATTGGTTACATTGAGCACCATGACCGCAAGATTATGGAGGCTATGCTAGTTCCACCTAT 22362 Query 5872 CCTCCTAGGGCTGTCACGTGGTCAATCTGGCTCTTATGCACTGTCTTCAAACCAATTTGA 5931 | || || | || || || |||||||| || || || || ||||| ||||| Sbjct 22363 GTTGCTTGGTATCGGTCGAGGACAGTCTGGCTCATACGCTCTTACTAATAACCAGTTTGA 22422 Query 5932 CATCTTTATGATCCACCTTGAAAGCATT-CAGCGTGATATCAAATCACTTATCGAGGAAG 5990 | | || |||| || || |||| || |||||||| | || | ||||| ||||| | Sbjct 22423 CGTATTCATGA-GCAGATTAGAAGCGTTACAGCGTGACTTGAAGGCGCTTATTGAGGAGG 22481 Query 5991 AAATAATCAGACCCTTGGTTGACCTGAACTTCCCTAACGTTACAAGGTACCCTGCGTTCA 6050 || | || ||||| | | ||| | ||||| |||||||||| | |||||| | ||| Sbjct 22482 AAGTCATTAGACCACTAATCGACTTAAACTTTCCTAACGTTAAGAAATACCCTTCATTCC 22541 Query 6051 CATTCAAGCCTTTAGCAGATCGA-GACATCGACAAGCTGTCAAGTGTATTTGAGAAGTTG 6109 |||| || | || | ||| ||||| | ||||| | | ||||| | || || Sbjct 22542 AATTCCGTCCACTTGC-TAACGAGGACATTCAAAAGCTTGCTAACGTATTCATGCAGATG 22600 Query 6110 ATCAACGCTTCTGTCATTGCCCCTGAGGAAGACTGGTTACGTGAAGAGCTTGGCTTCCC 6168 || | ||| || |||| || ||||| ||||||||||| || ||||||||||| Sbjct 22601 ATTACAGCTGGAGTTATTGATGCTAGTGAAGATTGGTTACGTGAGGAACTTGGCTTCCC 22659 Score = 297 bits (328), Expect = 6e-76 Identities = 410/567 (72%), Gaps = 10/567 (2%) Strand=Plus/Plus Query 30219 TGGAATGCGTGACTTGTGTAAACAAGTTCAACCTACTGAGTTTAAACACATTGTAGCGAT 30278 |||||||| | || |||||| || || |||||| ||||| | || | |||||||| Sbjct 199 TGGAATGCAACAATTATGTAAAGCTGTACAGCCTACTAAGTTTGAGCATCTCGTAGCGAT 258 Query 30279 CAACGCTTTGTACCGTCCACCAGCTTTAGCCTCTGGAGATACTTGGAGATATGCCAATAT 30338 | || |||||| | |||||||| ||||| |||||| ||||||||||| || | || Sbjct 259 TACAGCATTGTACAGACCACCAGCATTAGCTAGTGGAGACACTTGGAGATACGCTGACAT 318 Query 30339 CAAGAATGGCAGAGAGGAAGAGCGATACAGCCACCCAGAGGAAAAACAAATCACAGGTGA 30398 |||||||| | || || |||| |||||||||||||| || || | || |||||||| Sbjct 319 TAAGAATGGTAAAGCTGAGGAGCATTACAGCCACCCAGACGAGAAGCGCATAACAGGTGA 378 Query 30399 AACTTACGGGGTTATCACTTATCAGGAACACGTTATGCAACTTGTACA-TCATTTTGCTG 30457 || | || || || || | || || ||||||||| | ||||||| ||| ||||||| Sbjct 379 GACCTTTGGAGTCATTACCTTCCAAGAGCACGTTATGGAGATTGTACACTCA-TTTGCTG 437 Query 30458 GATGGGATTACGGACGAGGTGACAAGCTCCGTAAGATGAGTGCAGAACAACTTGAAGAAC 30517 | |||||||| |||||||| ||||| || |||||| ||||| || ||||||||| | Sbjct 438 GTTGGGATTATGGACGAGGCGACAAACTACGTAAGGCTAGTGCTGAGGAACTTGAAG--C 495 Query 30518 TAAGAG--CAGAATTTATCTGGGACTCTGTTTCGAACTTCGATTATGATCAAGACAACGT 30575 || | | |||| ||||| ||| || ||| | | | || |||||| Sbjct 496 TATGCGCTCAGAGTTTATTGAGGATGCTTGCAAGAAGTACTCACACGA--CGCACAACGA 553 Query 30576 TGAGTTTATAG--CTCAGATGGGTGACTTATGGGATCGTATTGTCCAGTACATGGGTTAC 30633 || || | | ||||||||| ||| | ||| ||||||||| ||||||||||||||| Sbjct 554 ACAGCTTTTCGCTCTCAGATGGATGAGCTTTGGAGTCGTATTGTACAGTACATGGGTTAC 613 Query 30634 GGATTCAATAAGTCCCACGGAGTAGCTTACTCTATGTTGACATACCTCACGGTATTTCTG 30693 || ||||||||||||||||||||||||||| ||||| | || || | || | || || Sbjct 614 GGTTTCAATAAGTCCCACGGAGTAGCTTACACTATGATTACTTATATGACAGCATGGCTA 673 Query 30694 GAGCATTACTATCCAGAGCACTACATGTCAGCGATACTCACAAGTAAAATGTCTGACCAA 30753 ||||| ||| |||||||||| | | | || | | | ||||||||| ||| || Sbjct 674 GAGCACCACTTCCCAGAGCACTTCCAAGCCTCACTAATGAGTACTAAAATGTCAGACAAA 733 Query 30754 GAGACATTGGCTAAAGTGTTCCAAGAC 30780 || | | | ||| || | ||||||||| Sbjct 734 GACAAAATAGCTCAAATATTCCAAGAC 760 Score = 253 bits (280), Expect = 6e-63 Identities = 448/645 (69%), Gaps = 10/645 (2%) Strand=Plus/Plus Query 26985 AGAAGAGGCAAGAAAGTTCATTGAAAGAATGATGAGAAAGCAAGACAAAAAGGA-ACTC- 27042 ||| ||||| ||||||| || ||| ||||| || ||| | ||||| || | |||| Sbjct 43900 AGACGAGGCTCGAAAGTTTATCGAACAAATGAGGA---AGCGACACAAACAGCACACTCT 43956 Query 27043 -CCTACGTTTAAGATGCCGAGAATGAAGCTGGCAAAGGTTAGCTCCTACAGAGGGTACTC 27101 || | || ||||| | | |||||| | || || || | | ||| ||||| ||||| Sbjct 43957 ACCAGCTTTCAAGATTCAAAATATGAAGTTTGCTAAAGTGAACGACTATAGAGGTTACTC 44016 Query 27102 AGAAGAGACTATCAAACATTGGAAGTT-CTTCCTTGCTAAAGATGGAGAGCTACAAGACA 27160 | |||| | | | ||||| | | |||| | ||| || || || |||||| Sbjct 44017 ACAAGAAGCGCTTGACTGGTGGAAAATACGATATTGC-ACAGAAGGCGAACTCAAAGACA 44075 Query 27161 GAATCATTATTCCCTTCGAGGATGTAGATAACCGCCTTGTTGGTATAACTGGCAGGGCAA 27220 |||| | || | | || |||||||| || | ||||| || |||||||| || |||| Sbjct 44076 GAATAGTCATGGCTCTGGAAGATGTAGACAAAAGACTTGTAGGCATAACTGGGAGAGCAA 44135 Query 27221 CCAAAGCAGATCAACCAGAAAAGTTCATGCACCGACCAAGAAACCTGCACACAGGGTTTT 27280 |||||||||| ||| |||||||||||||| || || |||||| | ||||| || | | Sbjct 44136 CCAAAGCAGAACAAGTGGAAAAGTTCATGCATCGTCCTAGAAACTTACACACTGGTTACT 44195 Query 27281 TCCTCACAGGGCTGGGAAGGAACAAGAAGTTCCTCGAAGAGTACGGCTACACGGTTAAAA 27340 | ||||||||||| || || ||| ||| | || |||| | |||| ||||| | Sbjct 44196 TTCTCACAGGGCTTGGTAGAAACTTGAAATATGTCCAAGAAGCAAACAACACAGTTAAGA 44255 Query 27341 TCGTTGAGGGTGTCTTTGATTGTGCTCGGTGGTATGACTCAGGACATAAAAACGTTTGCG 27400 | || ||||| | |||||||||||||| |||| ||||| || |||||||| || ||| Sbjct 44256 TTGTAGAGGGGCTTTTTGATTGTGCTCGCTGGTGGGACTCTGGTCATAAAAATGTATGCT 44315 Query 27401 CCCCTATTGGTGTATTCTTCACAGAAGAGCATATTGACCAGCTTTACAAAGCAGGGGTAA 27460 || ||||| || |||||||| || |||||||| || || || || ||||| |||| Sbjct 44316 GTCCAATTGGAGTGTTCTTCACCGAGGAGCATATCTTACAACTCTATAAGGCAGGTGTAA 44375 Query 27461 TTGGTATCGACCTCGGTTTTGATAACGACCCAGCAGGAAGAAACGGAATCAGGAGAGC-T 27519 | | || |||||||||| || || |||||| | |||||| | | | || | Sbjct 44376 CAACTCTTGAAATCGGTTTTGACAATGATAAAGCAGGTCGTAACGGATTTCGTAAGGCGT 44435 Query 27520 ATCAAGAGAGCCAAGTACAAGTTCGATATTCATGTGCTTGTTTACCCAGAAGGTAAAGAC 27579 | ||| | |||||| ||||| || | || ||| | ||||||||||| |||| Sbjct 44436 ACCAA-AAAGCCAAAGGTAAGTTTGAGGTCTATTACCTTATGTACCCAGAAGGGCAAGAT 44494 Query 27580 GCTGACGACTGCACCAAAGAAGAGCTTGACGAGGTAGACAAAAAT 27624 |||||||| | |||||||| || ||| | |||| || ||| Sbjct 44495 GCTGACGATTTGCGAAAAGAAGAACTCGACAAAGTAGCTAAGAAT 44539 Score = 181 bits (200), Expect = 3e-41 Identities = 219/289 (76%), Gaps = 7/289 (2%) Strand=Plus/Plus Query 10162 TTGAAAAACAAGAATATCCGTGACGCATTCCGTCAGAATAACACAGACGTTGCATTGCTT 10221 |||||| | || | || ||||| || |||||| |||| |||||||| ||||| ||| | Sbjct 26856 TTGAAACAAAAAGACATTCGTGATGCGTTCCGTGAGAACAACACAGATGTTGCTTTGTTA 26915 Query 10222 CGTGGATACATTGGCGACTTTATGGGTCTTAGCTTT-ATTGTTGATTCTCACTTCCAAGA 10280 ||||| || ||||||||||| ||||| |||| | || || | ||| |||| || Sbjct 26916 CGTGGCTATATTGGCGACTTCATGGG-CTTATCGTTCATCGAGGATGAAAACTTTGCGGA 26974 Query 10281 GGACAACGCTTTAGTTC-TACAAAAGAAAGTAATCGGTGATATTGCTGATGCTGAGCCAT 10339 | ||| || |||| || | || || |||||||| |||||||| |||||| | Sbjct 26975 TGGTGACGTATT-GTTCGTAGAGAAAAAGACTATCGGTGAAATTGCTGACGCTGAGGGCT 27033 Query 10340 TACGCACATACACTTACAACGAGGAAAGCA-ACGAGCGTACTATTGTACGTGCAACTCGT 10398 |||| || | |||||||||| ||||| | || ||||| ||||||||||||||||| Sbjct 27034 TACGTACTAAGGTATACAACGAGG-AAGCAGAAGACCGTACGATTGTACGTGCAACTCGC 27092 Query 10399 TTCACTAACGCTTACTTAACAGACCCTAAAGCGGTTTACCTGATTAAAG 10447 | |||| | |||||| |||||||||||||||||||||||||| |||||| Sbjct 27093 TACACTCAAGCTTACCTAACAGACCCTAAAGCGGTTTACCTG-TTAAAG 27140 Score = 145 bits (160), Expect = 2e-30 Identities = 407/615 (66%), Gaps = 20/615 (3%) Strand=Plus/Plus Query 25800 GTAGGGCAAGCTGTCAAGAAACTCGGTGAGGGAATCAAAGACAGAATGAAACAGAGGGCG 25859 |||| ||||| || || || || || || || || ||| || | ||||| | || Sbjct 42514 GTAGCGCAAGGAGTTAAAAAGCTAGGGGAAGGTATTGGAGAGCGACTCAAACAACGAGCC 42573 Query 25860 ATAGCTCCAAAGGATGTAATTGGTATCAAGACAGGGTGGGCTCCATTCGATTTAGCCGCA 25919 | ||| | || || || || |||||||||| ||| | ||||| |||||| | Sbjct 42574 TTGAAGCCACAAGACGTTATAGGACTCAAGACAGGATGGCACGCTTTCGACTTAGCCTCT 42633 Query 25920 AGGGGTTTAGTTGACGGAGAGCTTACAATCGTAGGAGCCAGACCAAAGGTCGGTAAGTCT 25979 ||||||||| ||| ||| | || ||||||||||| | | || |||||||||||| Sbjct 42634 CAAGGTTTAGTTATCGGTGAGTTGACTATCGTAGGAGCTCGCTCCAAAGTCGGTAAGTCT 42693 Query 25980 ACAGTTTTACTTAATTGGTGCAAAAAGATATGTCTCGATGACGGTATTCCAGTTCTGTAT 26039 ||| ||||| || ||||| |||||||| ||| | || ||||| | || | | ||| Sbjct 42694 ACAACGTTACTAAACTGGTGTAAAAAGATTTGTGTTGACGACGGAGTACCTACTTTATAT 42753 Query 26040 ATCGACACTGAGAACTATTCCCATGAGCAGGAAGACAGATTACT-CTCATTATTGTCTGG 26098 ||||||||||||| || ||| ||||||||||| | |||| |||| | ||||| Sbjct 42754 ATCGACACTGAGATGTACGACCACGAGCAGGAAGATAAGCTACTGAGTATTA-TCTCTGG 42812 Query 26099 TGTTGACCATACAGAAATAGAAAACGGTCAATTCGCAAGGGATACGTTCAATGGTGAAGC 26158 || | || |||||| ||||||| | || || | ||||| | | ||| Sbjct 42813 AGTCCAGCACCATGAAATACGAAACGGTTACTTTGCTCGTAATACG--GAGTTTGGAACT 42870 Query 26159 TAAAACGAAAATG--AAAGCCGTGGCGGAAGCATCTAGGATTATCGAATCAGGTAACTTC 26216 || || || | |||| || || ||||| || | |||| | || | ||| Sbjct 42871 GGCAAGGAGAAGGCTGAAGCGGTTGCAGAAGCTAGTAAGGCTATCTCAAAAGCTCCTTTC 42930 Query 26217 CATCATATTTATTTACCATTCTTCACACCTGATAAGATTGAACACATCGTA---AGGGAG 26273 | || || ||| | ||| ||| || | |||| | || |||| || || Sbjct 42931 TACCACATCTATATGCCAAACTTTACGTTAGCCGAGAT---AGCCAGCGTAATTAGAAAG 42987 Query 26274 TACCAGATCAACAATGGTAT-CAGACTGGTGTGCTTTGACTATATCAAACTACCA---TC 26329 ||||||| | | ||||| ||| || || |||||| || || || |||||| || Sbjct 42988 CACCAGATAGAACACGGTATACAG-CTCGTAGTCTTTGATTACATTAAGCTACCAAGCTC 43046 Query 26330 AAGTGACAGCAAGCTCGGTGATAAAGAGTGGCAACAACTAGGGTACCTGACAAGTAAACT 26389 || |||| || | || || |||||||||||| || || ||||| |||||| ||| Sbjct 43047 AA---ACAGTAACTTAGGAGACAAAGAGTGGCAAGCTCTTGGATACCTTACAAGTGGACT 43103 Query 26390 TAAAGACTTAGCAGG 26404 ||||||||||| || Sbjct 43104 AAAAGACTTAGCTGG 43118 Score = 127 bits (140), Expect = 6e-25 Identities = 273/399 (68%), Gaps = 8/399 (2%) Strand=Plus/Plus Query 42666 AAGGGCAAAAAGAGTGTTCAGGAAGCTGGTATCAAAGACCGCCACTTCGTTATCATTGAT 42725 |||||||| |||| || || || || |||| | | || ||||| ||||| ||||| Sbjct 9791 AAGGGCAAGAAGAAAGTCCAAGATGCAAATATCTATAAGCGACACTTTGTTATTATTGAC 9850 Query 42726 GAGGTCGGGGAGCTTAACCCCTCTGAGGCTGTCTCAAAAGAAGAGCGCAAACTCAAAGAG 42785 ||||| || ||||| ||||| | || || | |||| ||| || ||||||||| Sbjct 9851 GAGGTAGGAGAGCTCAACCCAGCAGAAGCAACCGACAAAGCAGATAAGAAGCTCAAAGAG 9910 Query 42786 GAATGTCAGAAGTACATGTCTCAAATAGCACGCCTTGGAGCTGGCTTGGGATTCCGCCAA 42845 || |||||| |||||| ||||||||| |||||||| ||||| || |||| | | | Sbjct 9911 GAGTGTCAGCGCTACATGAGTCAAATAGCTCGCCTTGGTGCTGGTTTAGGATATAGACTA 9970 Query 42846 GTATTAGCCACCCAGTACACCACAGGAGATGTCATTCCCCGTCAG-TGT-AAACAGAATA 42903 || |||| || |||||| | || || || || ||||| | || ||| || |||||| Sbjct 9971 ATAGTAGCTACACAGTACCCAACTGGGGACGTTATTCCTAG--AGCTGTCAAGCAGAATT 10028 Query 42904 GCGATGCCAAAGTGTGCTTTAGGGTTCAAAGCGAGGTAGCCAG-CAGGGTGACCCTTGAC 42962 | || | || | |||||| | || | | || |||||| || | || ||||| Sbjct 10029 GTGACGTTAAGATATGCTTTCGAGTACGTAACGCTACAGCCAGTCAAGTTG-TACTTGAT 10087 Query 42963 AGTTCTGGAGCCGAGAAGCTACCAGAGATAAGAGGGCGTGCTCTATATCAGACAGCAGAC 43022 ||||| || ||||| |||| || | ||| || ||| | || ||| ||| Sbjct 10088 GAGGGAGGAGCTGAAAAGCTTCCAGCTATTAAAGGTCGAGCTATCGTACAATTAGCTGAC 10147 Query 43023 AAGAGGAGAACTA-TCCAGACATACCTTATCAAGCCAGA 43060 ||| ||||| || |||||||||| |||| || |||| Sbjct 10148 AAG-CGAGAAATACTCCAGACATATTTTATTAACTCAGA 10185 Score = 95.1 bits (104), Expect = 4e-15 Identities = 189/277 (68%), Gaps = 10/277 (4%) Strand=Plus/Plus Query 31881 TTCGTTGACAGAATAGATGGAGA---TAAAGACGACCCTTCTAGTTGGATCGTGACAGAT 31937 ||| ||||| ||||||| ||||| | ||||| |||||| |||||| || || ||| Sbjct 2300 TTCATTGACCGAATAGACGGAGACCCTTCAGACG---CTTCTACTTGGATTGTAACGGAT 2356 Query 31938 TACAAAACAGGATCAAACCCTAAGAGTAAACAATACTTAAGCGATGATCTACAGCTAGGT 31997 || ||| | || |||| |||| || | || | | ||||| ||||||| | | Sbjct 2357 TATAAATCTGGCTCAAGTGTTAAGTCAAAGCCATTTCTGACTAATGATATACAGCTCGCT 2416 Query 31998 TTGTACGTTGC--TCAGATTCACTCAGAGTTTGGAGCATACCCAAAAGCTGTACAATTTT 32055 |||||| | | | ||||| ||||||||| || ||||| ||| || | | Sbjct 2417 GTGTACGCTCAAATGATATTCAA--AGAGTTTGGGGCTTACCCTCAAGTAGTGAGCTACT 2474 Query 32056 ATCACCCTGTCATAGACAAATTCCAGACAGCTATACACCAAGGAGACGGAGTATACAGGT 32115 |||||| || ||| |||| | || | |||||||||||||||||||||| |||| | Sbjct 2475 TTCACCCAGTTATAAACAAGTGGCAAAAAGCTATACACCAAGGAGACGGAAACTACAAAT 2534 Query 32116 TCACCAATCAGCGTGCTCCAGTGGTTGAATTCTCTGT 32152 || || |||||| || || || |||||||| Sbjct 2535 ATACGAACCAGCGTAACCCTGTAGTCACTTTCTCTGT 2571 Score = 87.8 bits (96), Expect = 6e-13 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 15754 CCGTTCTCCCCAGCTAAAGAAGGTCCATTGAAAGACCTTGACAAATCAGGTGAGTCATTC 15813 || ||||| ||||| || ||||| | | | ||||| |||||||| ||| |||||||| Sbjct 32580 CCATTCTCACCAGCCAAGAAAGGTGCTCTAAGCGACCTAGACAAATCTGGTAAGTCATTC 32639 Query 15814 TTCCCGACTTGGTACGAGGCGGCATTGAAAAAGGTTAGCCCGATGACTAAAGCAGTCGGA 15873 ||||| || ||||||||| | || | | | ||||| || ||||| | ||| |||| Sbjct 32640 TTCCCAACATGGTACGAGTCAGCTCTAACTCAAGTTAGACCAATGACGAGAGCTATCGGT 32699 Query 15874 GGAGCAATGAG 15884 ||||| ||||| Sbjct 32700 GGAGCTATGAG 32710 Score = 84.2 bits (92), Expect = 7e-12 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 29458 GGCTCTGGAGCTGGCTCTCTTGTCGCTTACCTTCTGGATATCACAGAGGTTGACCCAATC 29517 ||||| | || |||||| || || |||||| | || ||||| || ||||||||||| || Sbjct 50960 GGCTCAGCAGGTGGCTCACTCGTAGCTTACTTACTTGATATTACGGAGGTTGACCCTATA 51019 Query 29518 AAACACGGTCTGTTCTTCGAGCGCTTCCTAGATATCACCAGACAGAAGATGCCCGACATT 29577 ||||||| | | || |||||||||||||| | || | |||| | || || || Sbjct 51020 CCACACGGTTTATATTTTGAGCGCTTCCTAGACGTTACTCGCTTGAAGTTTCCAGATATC 51079 Query 29578 GATACAGATAT 29588 || |||||||| Sbjct 51080 GACACAGATAT 51090 Score = 80.6 bits (88), Expect = 8e-11 Identities = 83/109 (76%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 9578 AAATGGCTGATATCGTACTAGGTCAACACCCTTTATTGAAAAAGGTATTCTTAGATAGAC 9637 ||||||||||||||||| |||||||||||| | |||||||| | ||| |||| | || Sbjct 26293 AAATGGCTGATATCGTATTAGGTCAACACCAGATGTTGAAAAAAGAATTTGTAGACAAAC 26352 Query 9638 GCATTAGAGATTTTACTGAAAGTGGTTTTATCGCTGATCAGTTATTCAC 9686 | ||||||| ||| | || | ||| | ||||| || |||||||| Sbjct 26353 GTATTAGAGGTTTGATTGGTCATAATTTCGTAGCTGACCAATTATTCAC 26401 >seq222169 Length=327 Score = 136 bits (150), Expect = 1e-27 Identities = 132/170 (78%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 3239 ACAGCAGAAGAAATAAAGAAAATGCGTAACATTTTACGTGATCCAGTAGGCTTTACCGAG 3298 ||||||||| | | | || |||||||||||| | ||||| || ||||| || || ||| Sbjct 172 ACAGCAGAACAGCTCCACAAGATGCGTAACATTATGCGTGACCCTGTAGGATTCACTGAG 113 Query 3299 AAGACAGGAACCGTCAAGGGTAAACCCTTCAAGTTTAAACACCGAGAGCACTTGTATGAT 3358 ||||| ||||| || ||||||||| |||||||||| | ||| | ||||||||| | ||| Sbjct 112 AAGACTGGAACTGTAAAGGGTAAAGACTTCAAGTTTGACCACAGGGAGCACTTGCACGAT 53 Query 3359 GTATACCGAGACAAGCACCCTCGTATAGTCATCGTAGCAGGTCGTCAGGT 3408 || || ||||| |||||||| || ||||| ||||| || || || || Sbjct 52 GTCTATAGAGACCCTCACCCTCGAATTGTCATTGTAGCTGGACGACAAGT 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156965909293888