Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_022766.1
Length=49246
Score E
Sequences producing significant alignments: (Bits) Value
seq78791 767 0.0
seq222169 136 1e-27
>seq78791
Length=51567
Score = 767 bits (850), Expect = 0.0
Identities = 1998/2999 (67%), Gaps = 122/2999 (4%)
Strand=Plus/Plus
Query 3240 CAGCAGAAGAAATAAAGAAAATGCGTAACATTTTACGTGATCCAGTAGGCTTTACCGAGA 3299
||||||| || | ||||| ||||| ||| || | | || || | || || || ||||
Sbjct 19713 CAGCAGAGCAACTCAAGAAGATGCGGAACGTTATGAGAGACCCTATCGGATTCACTGAGA 19772
Query 3300 AGACAGGAACCGTCAAGGGTAAACCCTTCAAGTTTAAACACCGAGAGCACTTGTATGATG 3359
||| || || |||||||||||| | |||||||| | ||||||| ||||| | || |
Sbjct 19773 CGACTGGGACTGTCAAGGGTAAAGCTTTCAAGTTCGACCACCGAGGTCACTTACACGAGG 19832
Query 3360 TATACCGAGACAAGCACCCTCGTATAGTCATCGTAGCAGGTCGTCAGGTTGAGAAGTCCG 3419
| ||| ||||| |||||| | | ||||| ||||| || || || || |||||||| |
Sbjct 19833 TCTACAGAGACCCTCACCCTAGAGTTGTCATAGTAGCTGGACGACAAGTAGAGAAGTCTG 19892
Query 3420 AGACAGTAAACCGCCTCATCCTTTTTCATGGATACACGAGACCGCACACAACCATTACAT 3479
|||| || ||||| | | || | || |||||| | || | || || || ||||| |
Sbjct 19893 AGACGGTTAACCGTTTGCTACTCTACCACGGATACCAGCGAGCCCATACTACGATTACCT 19952
Query 3480 ACACGGCACCTCGTAACGAGCAAACAACCCGTTTTGTCAACGACCGTTTTAGAAAGTCCA 3539
|||| || || ||||| ||||||||||| ||||| ||||||||||| ||||||||||| |
Sbjct 19953 ACACAGCTCCACGTAATGAGCAAACAACACGTTTCGTCAACGACCGCTTTAGAAAGTCTA 20012
Query 3540 TTGCA--ACTTCAAACGGAGCTGTACTTGAAGGAGATGTCAACAAAAACCGAGATGCAAA 3597
| || | | || | | ||| |||| ||| || || |||| || || || || ||
Sbjct 20013 -TACAGGAATCTAAGCAGGGCT-TACTCGAAAGAATGGTAGACAAGAAGCGTGACGCTAA 20070
Query 3598 GACAGCTATCGGGCTAAAGAACAACACAACGTACTATTTTGGCTCCTCATGGGCTGATGG 3657
||||||||| || |||| ||| ||| ||||||||||||||| | |||||||| ||
Sbjct 20071 GACAGCTATTGGACTAATTAACTCTACAGTGTACTATTTTGGCTCAGCGTGGGCTGACGG 20130
Query 3658 AGATGCCCTCCGAGGTATCTCAGGGGATATGGTGTTCTTTGACGAGGTTCAGGACATCGG 3717
|||||| ||||| ||||| | || ||||| || | || || ||||| ||||| ||
Sbjct 20131 AGATGCTCTCCGTGGTATTGCTGGCGATATAGTTATGTTCGATGAGGTACAGGATATTAC 20190
Query 3718 GCAGACAGCCATTGAGTCAATTGAGAAGAGTATTTCCCACTCAGAGATACAGGATGCGGT 3777
|||||||| || ||||||||||||||| | | || || ||||| | || | ||
Sbjct 20191 ACAGACAGCTATCGAGTCAATTGAGAAGTCTGTCTCACATAGCGAGATTAAAGACCCTGT 20250
Query 3778 AACCGAGATAAACGGACGTTGCTTCTACACGGGAACACCCAAACAGAAGGGCTCCTATTA 3837
|| ||| | || || || |||||||| || || || |||||||| ||||| || ||
Sbjct 20251 TACTGAGCTGAATGGTAAGTGTTTCTACACAGGTACGCCAAAACAGAAAGGCTCTTACTA 20310
Query 3838 CGACAAAGTCCTCTGGGGTAACTCTGATCAGAAGAAATGGTCAGT---ATGCTGTGAGAA 3894
|||| ||| |||||||| | ||| | |||||||||||| || |||| |
Sbjct 20311 CGACCGAGTACTCTGGGGACAATCTAACCAGAAGAAATGGAGCGTTGAGTGCTCT----- 20365
Query 3895 ATGCGGTCATGATCAGTTCTTGTCGATGAAAAACGTCATGGTTCAAAACGAAAAAGAAGA 3954
|| ||||| | || || || | ||||||||||| |||||| || || | ||
Sbjct 20366 -TGTGGTCACCACCAATTTATGACTATGAAAAACGTAATGGTTATGAATGAGGGAACTGA 20424
Query 3955 AAATGAGCGGAGATACTTTGGATGCCTTGAGTGTGAAGCAGAATTGAACCGTGAGAATGG 4014
| ||||| | |||||||| || || ||||||| | || || |||||||| |||
Sbjct 20425 CGAGGAGCGTCGCTACTTTGGCTGTCTGGAGTGTGGCGAGGAGTTAGACCGTGAGCGTGG 20484
Query 4015 ACAATGGGTCAAAACACGACCAAACAACAAGCGTTACAGCGGGTACCTGTTCAACCAGCT 4074
||||| ||| ||| | |||||| ||||| || ||| |||||||||||||
Sbjct 20485 CTCGTGGGTAGTAACGAAACCTCATAACAAGATGTACAGTGGCTACTTGTTCAACCAGCT 20544
Query 4075 CAATATGGCATGGATCAGTGCCAATCAAATCTGGCACGACTATAACAACATGGATGACAT 4134
|||||| | ||||| ||||| || |||||||||| |||| || | ||||| |||
Sbjct 20545 TAATATGACTTGGATTAGTGCAAACCAAATCTGGCGTGACTTTACGACTATGGACTCCAT 20604
Query 4135 GACCTTCCACAACGAGGTGCTAGGGGAATTCTACTCTGGAGACGAACAACCACTTTCTTA 4194
||| |||||||||||||| || || || || || ||||| || |||||| | |
Sbjct 20605 GACATTCCACAACGAGGTACTGGGAGAGTTTTATAGCGGAGATGAGCAACCAGTAACCCT 20664
Query 4195 CGAGGACGTACTTGCTTGTACAGATAAGA-GCTTGTCCTTGCAAAGCAAATGTGACATCC 4253
||||| ||||| |||||| || | |||| ||| | || | ||||| |
Sbjct 20665 TGAGGATGTACTAGCTTGTTGTGACCGCACGCTT-AGCTTAAAGAGACGCTCTGACACGC 20723
Query 4254 CAACTGTAATGGGTATTGACTATGGCTCTGGCGGTCAATCCAAGACAATTATCACAATTG 4313
||||||||||||| ||||||||||| ||| || | || || |||||||| || ||||
Sbjct 20724 CAACTGTAATGGGGATTGACTATGGTAGTGGTAGTAAGTCTAAAACAATTATTACTATTG 20783
Query 4314 GTCATGAAACAATGCACAAAGGCAAGAAAAAACTCTTGTTGGTTCACATGGAGAGCGCTC 4373
||||| || | || || || || | | ||||| ||||||
Sbjct 20784 GTCAT------------AATTGGGAGGGTAAGCTTGTGATTGACCACATTGAGAGC-TGG 20830
Query 4374 CTAACATGGATACAGACGA-TCGTATTGCTTATAT---CAACTCTTTG-----------A 4418
||| || |||| |||| | | | | | || |||||| ||| |
Sbjct 20831 CTACCA--GATAAAGACAACCCAGACAACCAACATGACCAACTCATTGAGTATCTGTGCA 20888
Query 4419 AGC-ACAA-----ATACAATGTCCAGAAGATCAATGGTGATATTGGGTATGGTCAATACG 4472
||| |||| ||||| || |||| || ||||| || || || ||| ||||
Sbjct 20889 AGCTACAAGCCATCTACAACGTTGAGAAAATAGTCGGTGACATCGGTTACGGTTCTTACG 20948
Query 4473 AG--GGGGAATCCTTCTATGCCATGTACGGAAGAGAAGCCATCTCTACAAGATACGTAAC 4530
|| ||| | | |||| ||| || || || | || ||||| |||||||| ||
Sbjct 20949 AGTCTCAGAAGC--TATATGGCATCTATGGTAGGAACGCTATCTCATGTAGATACGTTAC 21006
Query 4531 CTACCAGACTAACCCTAAGAAGCGTGA-AATAAAAGA-TAAATTCGTC----CTACAAGT 4584
|| || | |||| ||| ||||| ||||| || | ||| || ||||| ||
Sbjct 21007 GTATGCGAATGACCCACGGAAACGTGAGTATAAAGGATTCAATAACTCAACTCTACAGGT 21066
Query 4585 AGACAGAACGTTCTCGATGGACTCACTTA-TCATGGCTTTCAAGCGTGGAGAGATCGTCA 4643
|||| | || ||||| ||||| |||| | || || || || | | || || |
Sbjct 21067 AGACCGTACTTTCTCAATGGATAAGCTTATTGATATGTTCCATAAGTCTA-ACATAGTTA 21125
Query 4644 TCCCTTACAGTGACCCAGATAAGGTAGAAATGTTCTTTGACCACTATACAGCCATTGAGG 4703
| || |||| | ||||| |||| || |||||||||||||| ||||| |||||
Sbjct 21126 TTCCGTACAAGCAACCAGAGGAGGTTGAGTACTTCTTTGACCACTACACAGCTATTGAAA 21185
Query 4704 CGGTCTTCTCAGAGTC-AACTCAAGGTACTGGACGCAAGAGATACGACCACAGAACACCA 4762
| | ||| | ||||| ||| | || || |||| || |||||| | || |||
Sbjct 21186 TGATATTCACCGAGTCGAACAC-TTCCACAGGTGTTAAGAAGTATGACCACCGTACTCCA 21244
Query 4763 GACGATGCATTCCACTCCCTGAACTATGTCCGTGAGGGCATCTTCGAGATCAACAATAAA 4822
||||||||||||||| | ||||||| || | ||||| || |||| | | ||
Sbjct 21245 GACGATGCATTCCACAGCTTGAACTACGTTAGAGAGGGTATTCACGAGCTTACTAACCGT 21304
Query 4823 TTCGAATGGGACGGCGCTCAGAGAGA-AAGCTG-GGGAGAAGAAAAACTATTGAAACATG 4880
||||| |||||| | |||||| | | || | ||| | ||| || || |
Sbjct 21305 TTCGA--GGGACGATACAACGAGAGAGACGTTGACCCTGTAGACAGACTGTTTGAAGACC 21362
Query 4881 ACATTGATTTACC----------GTCAGAAAACGAGTGGTGATGTTTACTTTGTACTACA 4930
|| || ||||| ||| |||| | | || |||| | || || | |
Sbjct 21363 ACGGAGACTTACCTACTTGGTAGGTCTCTAAAC-ACTAGT-TTGTTAAATT--TAATGAA 21418
Query 4931 ATATAGTGAGTCAAAATATAGCTGGATTCTCCCT---TAG-GAGATCAGAAGGC-AGGAG 4985
| || | | | | | ||| | ||||||| || || |||| |||||| | |||||
Sbjct 21419 ACCTA-TTAATTATACTAT-GTCGGATTCTTGCTGTCAAGCGAGACCAGAAGACTAGGAG 21476
Query 4986 GCATAACAATGGGATTTTTCGACAAATTTAAACGAAACAAAGAAGACAAAACGGAAA-AG 5044
| | ||| |||||| | || || |||||| | | ||| | | | |||||
Sbjct 21477 GGAAAACTATGGGAATGTTTGA-TAATTTA---GCTAAAAATATGCC---TTGGAAAGTA 21529
Query 5045 TATGCAGAG-------GAGCTGACTGACCTTGCCAATGCAATGTTCAAAGAGATAGCTCT 5097
||||| ||| ||||||| || || || | || || ||||||| | |||
Sbjct 21530 TATGCTGAGAAGAAGAGAGCTGA-GGAGCTCATTAA--GATTGGTC-AAGAGATTGGTCT 21585
Query 5098 TATGAAAGATACAACAAGCGAGCTACCAGACCAAGAGGACTACAATCCGACAGACTTCTC 5157
| ||||| || ||||| |||||||| |||| || || |||||||
Sbjct 21586 CTTTAAAGACGACACTTACGAGCGTCCAGACCAGTTAGACTTTAACCCCTCAGACTTTGA 21645
Query 5158 TCTCGAGGTATACGAAAAGATGCTCACAGATGGTCAAGTTAAGTCAGCCCTTGACATGAT 5217
|| || |||| || || ||| | || || || || ||||| | | | | || |||||
Sbjct 21646 CCTTGAAGTATGGGACAAAATGATGACCGACGGACAGGTTAAAGCTGGCTTAGATATGAT 21705
Query 5218 CAAGCTATCAGCAACCGCAAAAGGCTTCACCGTAACAGGTGACGACGATGAGTCTAAAAA 5277
|||||||| | || |||||||| | |||||||||||||| ||| |||||||
Sbjct 21706 TAAGCTATCTTGCTCGGCTCGTGGCTTCACTATTACAGGTGACGACGAGGAGACTAAAAA 21765
Query 5278 GTATGCCGACTTCATCAATGAGAACTTTGAAATGATCAGGGGCAACATGGAAGATGTACT 5337
|||||| || || || | |||||||| ||| | ||||||||||| || ||| |
Sbjct 21766 GTATGCTGAGTTTATTTCATATAACTTTGAGTCGATTCGTGGCAACATGGAGGACGTAAT 21825
Query 5338 CAAAGAGATCATGACAGCCCTTGAGTATGGTTATAGCTGTACAGAGAAGGTCTTCGAGT- 5396
||||| | |||| || |||||||| || ||| || ||||| || ||||
Sbjct 21826 TGGTGAGATGCTTTCAGCTCTAGAGTATGGCTACTCAGTTACGGAAAAGGTATTTGAGTA 21885
Query 5397 --ATAAAGATGGCAAGATCATGCTCAAGAAGCTGAAAACACTTGACCCTTATAGTGTAGC 5454
|||||||| | ||||| | | |||||||| ||||| || ||||| | | || |
Sbjct 21886 CGATAAAGATAGAAAGATAGTTTTAAAGAAGCTTAAAACGCTAGACCCACACAAGTTAAC 21945
Query 5455 AGGCAAGACGGATCGTTTTGGCGATCTCATGTATGTCAAACA-ACGCATCGGAAGCAAAA 5513
|||| || ||||| ||| | ||||||| || || | | |||| |
Sbjct 21946 TTTAAAGATTGACAAGTTTGGTGATTTAGTGTATGTACGTCAGTCGATTGGTCAGCACGA 22005
Query 5514 CAATCAAAATACCTGCTGATAAAGTCTTATGGTATGC--CCATCAAAAACGCTTTGGTAA 5571
|| | ||||| ||| ||| | | || ||| | ||| | || |||||||| ||
Sbjct 22006 -GATTGATATACCAGCTAGTAA--TGTGATTCTATACAGTCATGACAAGCGCTTTGGCAA 22062
Query 5572 TATCTACGGTCAATCCAGACTAAGAACGGTGTACAAGCACTGGTTCATCAAAGATAAAAT 5631
| |||||||| || || ||||| || |||||||||||| |||| || ||||| |
Sbjct 22063 CCTTTACGGTCAGTCAGCTCTGAGAACAGTCTACAAGCACTGGCTCATTAAGGATAAGCT 22122
Query 5632 GTACAGATTCGCCAACATTGCTTATGAGCGCTATGGTACGCCCCTTTTAGTTGGATCAGT 5691
|||||||||||| |||||||| || ||||| ||||| || || || ||||| || |||
Sbjct 22123 GTACAGATTCGCTAACATTGCCTACGAGCGTTATGGAACACCGCTATTAGTCGGTAAAGT 22182
Query 5692 AGAGGACAAAAATGATGTACCTGAGATCACACGCCTTTTGAGAAACATCAATGGTATGAC 5751
| ||||| || ||||| | || | | || |||||| || || | |||||
Sbjct 22183 ACAGGACGCTAACGATGTTGACAAAATGAATAGTCTATTGAGACGGATTAACAGCATGAC 22242
Query 5752 TGGACTAGGACTATCTGGCGGAGCTGATGTAAAAGCTATTCAGACAACTAACGCAGACTT 5811
| || | ||||| || || || ||||||||||| | | |||||| |||||
Sbjct 22243 TTCTCTGTCCATCTCTGGTCAAGACGACGTGAAAGCTATTCAAATGAGTAACGCTGACTT 22302
Query 5812 CATTGGATACATTGAGCACCACGACCGCAAGATCATGGAATCACTCCTTGTACCGCCATC 5871
|||||| |||||||||||||| ||||||||||| ||||| | | || || || ||
Sbjct 22303 CATTGGTTACATTGAGCACCATGACCGCAAGATTATGGAGGCTATGCTAGTTCCACCTAT 22362
Query 5872 CCTCCTAGGGCTGTCACGTGGTCAATCTGGCTCTTATGCACTGTCTTCAAACCAATTTGA 5931
| || || | || || || |||||||| || || || || ||||| |||||
Sbjct 22363 GTTGCTTGGTATCGGTCGAGGACAGTCTGGCTCATACGCTCTTACTAATAACCAGTTTGA 22422
Query 5932 CATCTTTATGATCCACCTTGAAAGCATT-CAGCGTGATATCAAATCACTTATCGAGGAAG 5990
| | || |||| || || |||| || |||||||| | || | ||||| ||||| |
Sbjct 22423 CGTATTCATGA-GCAGATTAGAAGCGTTACAGCGTGACTTGAAGGCGCTTATTGAGGAGG 22481
Query 5991 AAATAATCAGACCCTTGGTTGACCTGAACTTCCCTAACGTTACAAGGTACCCTGCGTTCA 6050
|| | || ||||| | | ||| | ||||| |||||||||| | |||||| | |||
Sbjct 22482 AAGTCATTAGACCACTAATCGACTTAAACTTTCCTAACGTTAAGAAATACCCTTCATTCC 22541
Query 6051 CATTCAAGCCTTTAGCAGATCGA-GACATCGACAAGCTGTCAAGTGTATTTGAGAAGTTG 6109
|||| || | || | ||| ||||| | ||||| | | ||||| | || ||
Sbjct 22542 AATTCCGTCCACTTGC-TAACGAGGACATTCAAAAGCTTGCTAACGTATTCATGCAGATG 22600
Query 6110 ATCAACGCTTCTGTCATTGCCCCTGAGGAAGACTGGTTACGTGAAGAGCTTGGCTTCCC 6168
|| | ||| || |||| || ||||| ||||||||||| || |||||||||||
Sbjct 22601 ATTACAGCTGGAGTTATTGATGCTAGTGAAGATTGGTTACGTGAGGAACTTGGCTTCCC 22659
Score = 297 bits (328), Expect = 6e-76
Identities = 410/567 (72%), Gaps = 10/567 (2%)
Strand=Plus/Plus
Query 30219 TGGAATGCGTGACTTGTGTAAACAAGTTCAACCTACTGAGTTTAAACACATTGTAGCGAT 30278
|||||||| | || |||||| || || |||||| ||||| | || | ||||||||
Sbjct 199 TGGAATGCAACAATTATGTAAAGCTGTACAGCCTACTAAGTTTGAGCATCTCGTAGCGAT 258
Query 30279 CAACGCTTTGTACCGTCCACCAGCTTTAGCCTCTGGAGATACTTGGAGATATGCCAATAT 30338
| || |||||| | |||||||| ||||| |||||| ||||||||||| || | ||
Sbjct 259 TACAGCATTGTACAGACCACCAGCATTAGCTAGTGGAGACACTTGGAGATACGCTGACAT 318
Query 30339 CAAGAATGGCAGAGAGGAAGAGCGATACAGCCACCCAGAGGAAAAACAAATCACAGGTGA 30398
|||||||| | || || |||| |||||||||||||| || || | || ||||||||
Sbjct 319 TAAGAATGGTAAAGCTGAGGAGCATTACAGCCACCCAGACGAGAAGCGCATAACAGGTGA 378
Query 30399 AACTTACGGGGTTATCACTTATCAGGAACACGTTATGCAACTTGTACA-TCATTTTGCTG 30457
|| | || || || || | || || ||||||||| | ||||||| ||| |||||||
Sbjct 379 GACCTTTGGAGTCATTACCTTCCAAGAGCACGTTATGGAGATTGTACACTCA-TTTGCTG 437
Query 30458 GATGGGATTACGGACGAGGTGACAAGCTCCGTAAGATGAGTGCAGAACAACTTGAAGAAC 30517
| |||||||| |||||||| ||||| || |||||| ||||| || ||||||||| |
Sbjct 438 GTTGGGATTATGGACGAGGCGACAAACTACGTAAGGCTAGTGCTGAGGAACTTGAAG--C 495
Query 30518 TAAGAG--CAGAATTTATCTGGGACTCTGTTTCGAACTTCGATTATGATCAAGACAACGT 30575
|| | | |||| ||||| ||| || ||| | | | || ||||||
Sbjct 496 TATGCGCTCAGAGTTTATTGAGGATGCTTGCAAGAAGTACTCACACGA--CGCACAACGA 553
Query 30576 TGAGTTTATAG--CTCAGATGGGTGACTTATGGGATCGTATTGTCCAGTACATGGGTTAC 30633
|| || | | ||||||||| ||| | ||| ||||||||| |||||||||||||||
Sbjct 554 ACAGCTTTTCGCTCTCAGATGGATGAGCTTTGGAGTCGTATTGTACAGTACATGGGTTAC 613
Query 30634 GGATTCAATAAGTCCCACGGAGTAGCTTACTCTATGTTGACATACCTCACGGTATTTCTG 30693
|| ||||||||||||||||||||||||||| ||||| | || || | || | || ||
Sbjct 614 GGTTTCAATAAGTCCCACGGAGTAGCTTACACTATGATTACTTATATGACAGCATGGCTA 673
Query 30694 GAGCATTACTATCCAGAGCACTACATGTCAGCGATACTCACAAGTAAAATGTCTGACCAA 30753
||||| ||| |||||||||| | | | || | | | ||||||||| ||| ||
Sbjct 674 GAGCACCACTTCCCAGAGCACTTCCAAGCCTCACTAATGAGTACTAAAATGTCAGACAAA 733
Query 30754 GAGACATTGGCTAAAGTGTTCCAAGAC 30780
|| | | | ||| || | |||||||||
Sbjct 734 GACAAAATAGCTCAAATATTCCAAGAC 760
Score = 253 bits (280), Expect = 6e-63
Identities = 448/645 (69%), Gaps = 10/645 (2%)
Strand=Plus/Plus
Query 26985 AGAAGAGGCAAGAAAGTTCATTGAAAGAATGATGAGAAAGCAAGACAAAAAGGA-ACTC- 27042
||| ||||| ||||||| || ||| ||||| || ||| | ||||| || | ||||
Sbjct 43900 AGACGAGGCTCGAAAGTTTATCGAACAAATGAGGA---AGCGACACAAACAGCACACTCT 43956
Query 27043 -CCTACGTTTAAGATGCCGAGAATGAAGCTGGCAAAGGTTAGCTCCTACAGAGGGTACTC 27101
|| | || ||||| | | |||||| | || || || | | ||| ||||| |||||
Sbjct 43957 ACCAGCTTTCAAGATTCAAAATATGAAGTTTGCTAAAGTGAACGACTATAGAGGTTACTC 44016
Query 27102 AGAAGAGACTATCAAACATTGGAAGTT-CTTCCTTGCTAAAGATGGAGAGCTACAAGACA 27160
| |||| | | | ||||| | | |||| | ||| || || || ||||||
Sbjct 44017 ACAAGAAGCGCTTGACTGGTGGAAAATACGATATTGC-ACAGAAGGCGAACTCAAAGACA 44075
Query 27161 GAATCATTATTCCCTTCGAGGATGTAGATAACCGCCTTGTTGGTATAACTGGCAGGGCAA 27220
|||| | || | | || |||||||| || | ||||| || |||||||| || ||||
Sbjct 44076 GAATAGTCATGGCTCTGGAAGATGTAGACAAAAGACTTGTAGGCATAACTGGGAGAGCAA 44135
Query 27221 CCAAAGCAGATCAACCAGAAAAGTTCATGCACCGACCAAGAAACCTGCACACAGGGTTTT 27280
|||||||||| ||| |||||||||||||| || || |||||| | ||||| || | |
Sbjct 44136 CCAAAGCAGAACAAGTGGAAAAGTTCATGCATCGTCCTAGAAACTTACACACTGGTTACT 44195
Query 27281 TCCTCACAGGGCTGGGAAGGAACAAGAAGTTCCTCGAAGAGTACGGCTACACGGTTAAAA 27340
| ||||||||||| || || ||| ||| | || |||| | |||| ||||| |
Sbjct 44196 TTCTCACAGGGCTTGGTAGAAACTTGAAATATGTCCAAGAAGCAAACAACACAGTTAAGA 44255
Query 27341 TCGTTGAGGGTGTCTTTGATTGTGCTCGGTGGTATGACTCAGGACATAAAAACGTTTGCG 27400
| || ||||| | |||||||||||||| |||| ||||| || |||||||| || |||
Sbjct 44256 TTGTAGAGGGGCTTTTTGATTGTGCTCGCTGGTGGGACTCTGGTCATAAAAATGTATGCT 44315
Query 27401 CCCCTATTGGTGTATTCTTCACAGAAGAGCATATTGACCAGCTTTACAAAGCAGGGGTAA 27460
|| ||||| || |||||||| || |||||||| || || || || ||||| ||||
Sbjct 44316 GTCCAATTGGAGTGTTCTTCACCGAGGAGCATATCTTACAACTCTATAAGGCAGGTGTAA 44375
Query 27461 TTGGTATCGACCTCGGTTTTGATAACGACCCAGCAGGAAGAAACGGAATCAGGAGAGC-T 27519
| | || |||||||||| || || |||||| | |||||| | | | || |
Sbjct 44376 CAACTCTTGAAATCGGTTTTGACAATGATAAAGCAGGTCGTAACGGATTTCGTAAGGCGT 44435
Query 27520 ATCAAGAGAGCCAAGTACAAGTTCGATATTCATGTGCTTGTTTACCCAGAAGGTAAAGAC 27579
| ||| | |||||| ||||| || | || ||| | ||||||||||| ||||
Sbjct 44436 ACCAA-AAAGCCAAAGGTAAGTTTGAGGTCTATTACCTTATGTACCCAGAAGGGCAAGAT 44494
Query 27580 GCTGACGACTGCACCAAAGAAGAGCTTGACGAGGTAGACAAAAAT 27624
|||||||| | |||||||| || ||| | |||| || |||
Sbjct 44495 GCTGACGATTTGCGAAAAGAAGAACTCGACAAAGTAGCTAAGAAT 44539
Score = 181 bits (200), Expect = 3e-41
Identities = 219/289 (76%), Gaps = 7/289 (2%)
Strand=Plus/Plus
Query 10162 TTGAAAAACAAGAATATCCGTGACGCATTCCGTCAGAATAACACAGACGTTGCATTGCTT 10221
|||||| | || | || ||||| || |||||| |||| |||||||| ||||| ||| |
Sbjct 26856 TTGAAACAAAAAGACATTCGTGATGCGTTCCGTGAGAACAACACAGATGTTGCTTTGTTA 26915
Query 10222 CGTGGATACATTGGCGACTTTATGGGTCTTAGCTTT-ATTGTTGATTCTCACTTCCAAGA 10280
||||| || ||||||||||| ||||| |||| | || || | ||| |||| ||
Sbjct 26916 CGTGGCTATATTGGCGACTTCATGGG-CTTATCGTTCATCGAGGATGAAAACTTTGCGGA 26974
Query 10281 GGACAACGCTTTAGTTC-TACAAAAGAAAGTAATCGGTGATATTGCTGATGCTGAGCCAT 10339
| ||| || |||| || | || || |||||||| |||||||| |||||| |
Sbjct 26975 TGGTGACGTATT-GTTCGTAGAGAAAAAGACTATCGGTGAAATTGCTGACGCTGAGGGCT 27033
Query 10340 TACGCACATACACTTACAACGAGGAAAGCA-ACGAGCGTACTATTGTACGTGCAACTCGT 10398
|||| || | |||||||||| ||||| | || ||||| |||||||||||||||||
Sbjct 27034 TACGTACTAAGGTATACAACGAGG-AAGCAGAAGACCGTACGATTGTACGTGCAACTCGC 27092
Query 10399 TTCACTAACGCTTACTTAACAGACCCTAAAGCGGTTTACCTGATTAAAG 10447
| |||| | |||||| |||||||||||||||||||||||||| ||||||
Sbjct 27093 TACACTCAAGCTTACCTAACAGACCCTAAAGCGGTTTACCTG-TTAAAG 27140
Score = 145 bits (160), Expect = 2e-30
Identities = 407/615 (66%), Gaps = 20/615 (3%)
Strand=Plus/Plus
Query 25800 GTAGGGCAAGCTGTCAAGAAACTCGGTGAGGGAATCAAAGACAGAATGAAACAGAGGGCG 25859
|||| ||||| || || || || || || || || ||| || | ||||| | ||
Sbjct 42514 GTAGCGCAAGGAGTTAAAAAGCTAGGGGAAGGTATTGGAGAGCGACTCAAACAACGAGCC 42573
Query 25860 ATAGCTCCAAAGGATGTAATTGGTATCAAGACAGGGTGGGCTCCATTCGATTTAGCCGCA 25919
| ||| | || || || || |||||||||| ||| | ||||| |||||| |
Sbjct 42574 TTGAAGCCACAAGACGTTATAGGACTCAAGACAGGATGGCACGCTTTCGACTTAGCCTCT 42633
Query 25920 AGGGGTTTAGTTGACGGAGAGCTTACAATCGTAGGAGCCAGACCAAAGGTCGGTAAGTCT 25979
||||||||| ||| ||| | || ||||||||||| | | || ||||||||||||
Sbjct 42634 CAAGGTTTAGTTATCGGTGAGTTGACTATCGTAGGAGCTCGCTCCAAAGTCGGTAAGTCT 42693
Query 25980 ACAGTTTTACTTAATTGGTGCAAAAAGATATGTCTCGATGACGGTATTCCAGTTCTGTAT 26039
||| ||||| || ||||| |||||||| ||| | || ||||| | || | | |||
Sbjct 42694 ACAACGTTACTAAACTGGTGTAAAAAGATTTGTGTTGACGACGGAGTACCTACTTTATAT 42753
Query 26040 ATCGACACTGAGAACTATTCCCATGAGCAGGAAGACAGATTACT-CTCATTATTGTCTGG 26098
||||||||||||| || ||| ||||||||||| | |||| |||| | |||||
Sbjct 42754 ATCGACACTGAGATGTACGACCACGAGCAGGAAGATAAGCTACTGAGTATTA-TCTCTGG 42812
Query 26099 TGTTGACCATACAGAAATAGAAAACGGTCAATTCGCAAGGGATACGTTCAATGGTGAAGC 26158
|| | || |||||| ||||||| | || || | ||||| | | |||
Sbjct 42813 AGTCCAGCACCATGAAATACGAAACGGTTACTTTGCTCGTAATACG--GAGTTTGGAACT 42870
Query 26159 TAAAACGAAAATG--AAAGCCGTGGCGGAAGCATCTAGGATTATCGAATCAGGTAACTTC 26216
|| || || | |||| || || ||||| || | |||| | || | |||
Sbjct 42871 GGCAAGGAGAAGGCTGAAGCGGTTGCAGAAGCTAGTAAGGCTATCTCAAAAGCTCCTTTC 42930
Query 26217 CATCATATTTATTTACCATTCTTCACACCTGATAAGATTGAACACATCGTA---AGGGAG 26273
| || || ||| | ||| ||| || | |||| | || |||| || ||
Sbjct 42931 TACCACATCTATATGCCAAACTTTACGTTAGCCGAGAT---AGCCAGCGTAATTAGAAAG 42987
Query 26274 TACCAGATCAACAATGGTAT-CAGACTGGTGTGCTTTGACTATATCAAACTACCA---TC 26329
||||||| | | ||||| ||| || || |||||| || || || |||||| ||
Sbjct 42988 CACCAGATAGAACACGGTATACAG-CTCGTAGTCTTTGATTACATTAAGCTACCAAGCTC 43046
Query 26330 AAGTGACAGCAAGCTCGGTGATAAAGAGTGGCAACAACTAGGGTACCTGACAAGTAAACT 26389
|| |||| || | || || |||||||||||| || || ||||| |||||| |||
Sbjct 43047 AA---ACAGTAACTTAGGAGACAAAGAGTGGCAAGCTCTTGGATACCTTACAAGTGGACT 43103
Query 26390 TAAAGACTTAGCAGG 26404
||||||||||| ||
Sbjct 43104 AAAAGACTTAGCTGG 43118
Score = 127 bits (140), Expect = 6e-25
Identities = 273/399 (68%), Gaps = 8/399 (2%)
Strand=Plus/Plus
Query 42666 AAGGGCAAAAAGAGTGTTCAGGAAGCTGGTATCAAAGACCGCCACTTCGTTATCATTGAT 42725
|||||||| |||| || || || || |||| | | || ||||| ||||| |||||
Sbjct 9791 AAGGGCAAGAAGAAAGTCCAAGATGCAAATATCTATAAGCGACACTTTGTTATTATTGAC 9850
Query 42726 GAGGTCGGGGAGCTTAACCCCTCTGAGGCTGTCTCAAAAGAAGAGCGCAAACTCAAAGAG 42785
||||| || ||||| ||||| | || || | |||| ||| || |||||||||
Sbjct 9851 GAGGTAGGAGAGCTCAACCCAGCAGAAGCAACCGACAAAGCAGATAAGAAGCTCAAAGAG 9910
Query 42786 GAATGTCAGAAGTACATGTCTCAAATAGCACGCCTTGGAGCTGGCTTGGGATTCCGCCAA 42845
|| |||||| |||||| ||||||||| |||||||| ||||| || |||| | | |
Sbjct 9911 GAGTGTCAGCGCTACATGAGTCAAATAGCTCGCCTTGGTGCTGGTTTAGGATATAGACTA 9970
Query 42846 GTATTAGCCACCCAGTACACCACAGGAGATGTCATTCCCCGTCAG-TGT-AAACAGAATA 42903
|| |||| || |||||| | || || || || ||||| | || ||| || ||||||
Sbjct 9971 ATAGTAGCTACACAGTACCCAACTGGGGACGTTATTCCTAG--AGCTGTCAAGCAGAATT 10028
Query 42904 GCGATGCCAAAGTGTGCTTTAGGGTTCAAAGCGAGGTAGCCAG-CAGGGTGACCCTTGAC 42962
| || | || | |||||| | || | | || |||||| || | || |||||
Sbjct 10029 GTGACGTTAAGATATGCTTTCGAGTACGTAACGCTACAGCCAGTCAAGTTG-TACTTGAT 10087
Query 42963 AGTTCTGGAGCCGAGAAGCTACCAGAGATAAGAGGGCGTGCTCTATATCAGACAGCAGAC 43022
||||| || ||||| |||| || | ||| || ||| | || ||| |||
Sbjct 10088 GAGGGAGGAGCTGAAAAGCTTCCAGCTATTAAAGGTCGAGCTATCGTACAATTAGCTGAC 10147
Query 43023 AAGAGGAGAACTA-TCCAGACATACCTTATCAAGCCAGA 43060
||| ||||| || |||||||||| |||| || ||||
Sbjct 10148 AAG-CGAGAAATACTCCAGACATATTTTATTAACTCAGA 10185
Score = 95.1 bits (104), Expect = 4e-15
Identities = 189/277 (68%), Gaps = 10/277 (4%)
Strand=Plus/Plus
Query 31881 TTCGTTGACAGAATAGATGGAGA---TAAAGACGACCCTTCTAGTTGGATCGTGACAGAT 31937
||| ||||| ||||||| ||||| | ||||| |||||| |||||| || || |||
Sbjct 2300 TTCATTGACCGAATAGACGGAGACCCTTCAGACG---CTTCTACTTGGATTGTAACGGAT 2356
Query 31938 TACAAAACAGGATCAAACCCTAAGAGTAAACAATACTTAAGCGATGATCTACAGCTAGGT 31997
|| ||| | || |||| |||| || | || | | ||||| ||||||| | |
Sbjct 2357 TATAAATCTGGCTCAAGTGTTAAGTCAAAGCCATTTCTGACTAATGATATACAGCTCGCT 2416
Query 31998 TTGTACGTTGC--TCAGATTCACTCAGAGTTTGGAGCATACCCAAAAGCTGTACAATTTT 32055
|||||| | | | ||||| ||||||||| || ||||| ||| || | |
Sbjct 2417 GTGTACGCTCAAATGATATTCAA--AGAGTTTGGGGCTTACCCTCAAGTAGTGAGCTACT 2474
Query 32056 ATCACCCTGTCATAGACAAATTCCAGACAGCTATACACCAAGGAGACGGAGTATACAGGT 32115
|||||| || ||| |||| | || | |||||||||||||||||||||| |||| |
Sbjct 2475 TTCACCCAGTTATAAACAAGTGGCAAAAAGCTATACACCAAGGAGACGGAAACTACAAAT 2534
Query 32116 TCACCAATCAGCGTGCTCCAGTGGTTGAATTCTCTGT 32152
|| || |||||| || || || ||||||||
Sbjct 2535 ATACGAACCAGCGTAACCCTGTAGTCACTTTCTCTGT 2571
Score = 87.8 bits (96), Expect = 6e-13
Identities = 98/131 (75%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 15754 CCGTTCTCCCCAGCTAAAGAAGGTCCATTGAAAGACCTTGACAAATCAGGTGAGTCATTC 15813
|| ||||| ||||| || ||||| | | | ||||| |||||||| ||| ||||||||
Sbjct 32580 CCATTCTCACCAGCCAAGAAAGGTGCTCTAAGCGACCTAGACAAATCTGGTAAGTCATTC 32639
Query 15814 TTCCCGACTTGGTACGAGGCGGCATTGAAAAAGGTTAGCCCGATGACTAAAGCAGTCGGA 15873
||||| || ||||||||| | || | | | ||||| || ||||| | ||| ||||
Sbjct 32640 TTCCCAACATGGTACGAGTCAGCTCTAACTCAAGTTAGACCAATGACGAGAGCTATCGGT 32699
Query 15874 GGAGCAATGAG 15884
||||| |||||
Sbjct 32700 GGAGCTATGAG 32710
Score = 84.2 bits (92), Expect = 7e-12
Identities = 97/131 (74%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 29458 GGCTCTGGAGCTGGCTCTCTTGTCGCTTACCTTCTGGATATCACAGAGGTTGACCCAATC 29517
||||| | || |||||| || || |||||| | || ||||| || ||||||||||| ||
Sbjct 50960 GGCTCAGCAGGTGGCTCACTCGTAGCTTACTTACTTGATATTACGGAGGTTGACCCTATA 51019
Query 29518 AAACACGGTCTGTTCTTCGAGCGCTTCCTAGATATCACCAGACAGAAGATGCCCGACATT 29577
||||||| | | || |||||||||||||| | || | |||| | || || ||
Sbjct 51020 CCACACGGTTTATATTTTGAGCGCTTCCTAGACGTTACTCGCTTGAAGTTTCCAGATATC 51079
Query 29578 GATACAGATAT 29588
|| ||||||||
Sbjct 51080 GACACAGATAT 51090
Score = 80.6 bits (88), Expect = 8e-11
Identities = 83/109 (76%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 9578 AAATGGCTGATATCGTACTAGGTCAACACCCTTTATTGAAAAAGGTATTCTTAGATAGAC 9637
||||||||||||||||| |||||||||||| | |||||||| | ||| |||| | ||
Sbjct 26293 AAATGGCTGATATCGTATTAGGTCAACACCAGATGTTGAAAAAAGAATTTGTAGACAAAC 26352
Query 9638 GCATTAGAGATTTTACTGAAAGTGGTTTTATCGCTGATCAGTTATTCAC 9686
| ||||||| ||| | || | ||| | ||||| || ||||||||
Sbjct 26353 GTATTAGAGGTTTGATTGGTCATAATTTCGTAGCTGACCAATTATTCAC 26401
>seq222169
Length=327
Score = 136 bits (150), Expect = 1e-27
Identities = 132/170 (78%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 3239 ACAGCAGAAGAAATAAAGAAAATGCGTAACATTTTACGTGATCCAGTAGGCTTTACCGAG 3298
||||||||| | | | || |||||||||||| | ||||| || ||||| || || |||
Sbjct 172 ACAGCAGAACAGCTCCACAAGATGCGTAACATTATGCGTGACCCTGTAGGATTCACTGAG 113
Query 3299 AAGACAGGAACCGTCAAGGGTAAACCCTTCAAGTTTAAACACCGAGAGCACTTGTATGAT 3358
||||| ||||| || ||||||||| |||||||||| | ||| | ||||||||| | |||
Sbjct 112 AAGACTGGAACTGTAAAGGGTAAAGACTTCAAGTTTGACCACAGGGAGCACTTGCACGAT 53
Query 3359 GTATACCGAGACAAGCACCCTCGTATAGTCATCGTAGCAGGTCGTCAGGT 3408
|| || ||||| |||||||| || ||||| ||||| || || || ||
Sbjct 52 GTCTATAGAGACCCTCACCCTCGAATTGTCATTGTAGCTGGACGACAAGT 3
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 156965909293888
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |