Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_022775.1 Length=36969 Score E Sequences producing significant alignments: (Bits) Value seq25145 98.7 2e-16 >seq25145 Length=439 Score = 98.7 bits (108), Expect = 2e-16 Identities = 136/188 (72%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 32071 TATCCAGCGTGAGTCGGGTGGTAATCCAAGAGCAATTAACCTTTGGGACAGCAACGCAAA 32130 |||||||||||| || ||||||||| || ||||||||| | ||||| |||||||| || Sbjct 49 TATCCAGCGTGAATCCAATGGTAATCCTAGGGCAATTAACTTGTGGGATAGCAACGCTAA 108 Query 32131 AGCTGGTATTCCGTCTA-AAGGCTTGATGCAAACAATCGGACCAACTTTTAACGCTTACA 32189 ||| || || || || | |||||| | ||||| || || ||||| || || || | | Sbjct 109 AGCCGGCATACCTTCAATGGGGCTTG-TACAAACTATTGGGCCAACGTTCAATGCGTTTA 167 Query 32190 AGTTTGCAGGTCATGGCAATATCTACAACGGATACGACAACCTATTGGCGGCCATCAACT 32249 ||||| | || || | || | || ||||| || ||| | || | || | || ||| Sbjct 168 AGTTTCCCGGCCACAACGATGTTTATAACGGCTATGACGATCTGCTTGCCGGTATTCACT 227 Query 32250 ACATTAAG 32257 |||| ||| Sbjct 228 ACATGAAG 235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117804178103816