Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_022918.1 Length=132123 Score E Sequences producing significant alignments: (Bits) Value seq111679 134 1e-26 >seq111679 Length=1463 Score = 134 bits (148), Expect = 1e-26 Identities = 252/369 (68%), Gaps = 6/369 (2%) Strand=Plus/Plus Query 24301 TTGTACAAAGTTTACTAAATCC---TCATTACTTGATAGTTGGTGTTCTACCTTATTATC 24357 ||||||||| | |||||| || |||| ||| |||| | |||| | | ||| Sbjct 1089 TTGTACAAACTCTACTAATTCTGTATCATCACTA---AGTTTTTTCTCTAGTTCTTCATC 1145 Query 24358 ATAATCAAACTCAACTTGAGCAAAACGGTCTAATGTAGCTCCATCCAGTTGCTGTCTTCC 24417 ||| | ||| || | | |||| | ||| |||||||| |||| ||| || | ||| Sbjct 1146 ATAGTTAAAGTCTAAAAGTACAAACCTGTCCAATGTAGCAGCATCTAGTATATGACGTCC 1205 Query 24418 TACATAAATGTGGTCTGCTCCAGTTCCCATAGTATTACCTGCTGATACTACTCTAAAGTC 24477 | ||| ||||| ||||| | || | |||||| | || | ||||| |||| || Sbjct 1206 TGTATACTGCTGGTCAGCTCCCCTACCTGTTGTATTAGCAGCAGCCACTACAGTAAAATC 1265 Query 24478 TTCATGTGCTGTCACACGACCAATAGGGAAGTCAAAGTATTTATTTGCAATAGCTGAGTT 24537 ||||||| | |||| |||| || | |||||| ||| ||||| || | || Sbjct 1266 AGGATGTGCTTGAGCTTTACCATTAGGAAAATTAAAGTACCGATTAGCAATTGCAGCATT 1325 Query 24538 AAGAATTAGTAATACTTCAGGGATAGATGCATCCATCTCATCTAGGAAGAATAATCCTCC 24597 || || | ||| | || || | || |||||||| ||||||| ||| |||| || || Sbjct 1326 CAGTATAACTAAAGCCTCTGGTACCGAAGCATCCATTTCATCTAAGAAAAATATACCCCC 1385 Query 24598 ATTTGTAAACGCTTTATAAAACTGAGTTTCATGAAACTTACCATTTGCATCAATAAATCC 24657 || ||||| |||| ||||||||||| || ||| | ||||| || ||||||||||| Sbjct 1386 CTTAGTAAAAGCTTGGTAAAACTGAGTCTCCTGATATGTACCAGAAGCGTCAATAAATCC 1445 Query 24658 TGTTAATTT 24666 |||||||| Sbjct 1446 AGTTAATTT 1454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421292234817072