Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_022968.1
Length=148567
Score E
Sequences producing significant alignments: (Bits) Value
seq158858 96.9 3e-15
>seq158858
Length=235449
Score = 96.9 bits (106), Expect = 3e-15
Identities = 156/222 (70%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 68395 GTTGCCTTCACAGCCATACCCAGTGAATCGCGGGTTGTGTACTGGGTAGTAAAGGAACCA 68454
|| || |||| ||| | || || |||||||| || || ||| |||| | || ||
Sbjct 214841 GTAGCTTTCATAGCAAACCCTAGAGAATCGCGAGTCTGATATTGGAAAGTATAAGATCCC 214782
Query 68455 ACACCGTACACGATATTGCTGGATGCAAAGCCTTTATCTTTCAGACGT-TCAAAGATGTC 68513
|| ||| | || | || | || ||||||||||| |||| | || | |||| || |
Sbjct 214781 ACGCCGAAAACAACGTTTGTTGAAGCAAAGCCTTTTTCTTCTA-ACTTCTCAACAATAGC 214723
Query 68514 TTTTGCACGAGCAACAGTGATAGAGTCACCGTAGATCAGGCCAACATGACTATCCAGAAC 68573
||||||||| ||| ||| ||||||||||| ||||| |||| |||| |||| | |
Sbjct 214722 TTTTGCACGCTCAAGAGTAATAGAGTCACCATAGATTGCACCAATATGAGTATCTAATAG 214663
Query 68574 TTTGTAACCCTTGGAGTTAACTTCACCACCAAAGATTTCCCA 68615
||| |||||||| ||| | ||||||||||| |||||
Sbjct 214662 TTTATAACCCTTCTCAGTAATTGTTCCACCAAAGATATCCCA 214621
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 473698777073760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |