Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_022968.1 Length=148567 Score E Sequences producing significant alignments: (Bits) Value seq158858 96.9 3e-15 >seq158858 Length=235449 Score = 96.9 bits (106), Expect = 3e-15 Identities = 156/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 68395 GTTGCCTTCACAGCCATACCCAGTGAATCGCGGGTTGTGTACTGGGTAGTAAAGGAACCA 68454 || || |||| ||| | || || |||||||| || || ||| |||| | || || Sbjct 214841 GTAGCTTTCATAGCAAACCCTAGAGAATCGCGAGTCTGATATTGGAAAGTATAAGATCCC 214782 Query 68455 ACACCGTACACGATATTGCTGGATGCAAAGCCTTTATCTTTCAGACGT-TCAAAGATGTC 68513 || ||| | || | || | || ||||||||||| |||| | || | |||| || | Sbjct 214781 ACGCCGAAAACAACGTTTGTTGAAGCAAAGCCTTTTTCTTCTA-ACTTCTCAACAATAGC 214723 Query 68514 TTTTGCACGAGCAACAGTGATAGAGTCACCGTAGATCAGGCCAACATGACTATCCAGAAC 68573 ||||||||| ||| ||| ||||||||||| ||||| |||| |||| |||| | | Sbjct 214722 TTTTGCACGCTCAAGAGTAATAGAGTCACCATAGATTGCACCAATATGAGTATCTAATAG 214663 Query 68574 TTTGTAACCCTTGGAGTTAACTTCACCACCAAAGATTTCCCA 68615 ||| |||||||| ||| | ||||||||||| ||||| Sbjct 214662 TTTATAACCCTTCTCAGTAATTGTTCCACCAAAGATATCCCA 214621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473698777073760