Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq78640 145 2e-30 >seq78640 Length=167548 Score = 145 bits (160), Expect = 2e-30 Identities = 253/368 (69%), Gaps = 0/368 (0%) Strand=Plus/Plus Query 37141 AAAGAAAATCACTTCGGCGCAAACGTGCTGGTTACCCGCAAAGGTGCTGTTCGGGCCCGC 37200 |||||| | |||| ||||| | || | || || || ||||| || || || || ||| Sbjct 136521 AAAGAAGAGCACTACGGCGAGGAAGTATTTGTCACACGTAAAGGCGCGGTACGTGCTCGC 136580 Query 37201 GAGGGCGACCTGGGCATCATCCCTGGCTCGATGGGTGCGAAGTCATTCATCGTTCGCGGC 37260 | ||||| || ||||||||||| || |||||||| || || || ||||| ||||| Sbjct 136581 GTTGGCGAATACGGTATCATCCCTGGGTCAATGGGTGCAAAATCCTTTATCGTGCGCGGT 136640 Query 37261 AAGGGAAATTCCGAATCGTTCTGCTCTTGCAGCCACGGTGCCGGTCGAATGATGAGCCGG 37320 || || || || || || ||||||||| || || || ||||| ||||| || Sbjct 136641 AAAGGTAACGAAGAGTCCTTTTGCTCTTGCTCGCATGGCGCAGGTCGCGTGATGTCACGT 136700 Query 37321 GCCGAAGCAAAACGCCGGTTCACAGTCGAGGATCATGAGGCGGCCACCAAAGGTATCGAG 37380 | || || ||| || || | | ||||| ||| || |||| | || Sbjct 136701 ACTGAGGCGAAAAAATTATTTACGATAGCCGATCAAATCGCGCAGACTGAAGGCGTAGAA 136760 Query 37381 TGCCGCAAAGATGCCGAAGTGATCGACGAGACGCCAGCGGCTTACAAGGACATCGATGCG 37440 ||||||||||| || || || || || |||| ||||| || |||||| ||||||||| Sbjct 136761 TGCCGCAAAGACGCTGAGGTTATTGATGAGATTCCAGCAGCATACAAGAACATCGATGAC 136820 Query 37441 GTCATGGCCGCGCAATCCGCCCTGGTGGACATCGTGCACACGCTGCGCCAAGTCGTTTGC 37500 || ||| ||||||| || | |||| || | ||||| || |||| || || ||||| Sbjct 136821 GTGATGAACGCGCAAAGCGACTTGGTAGAAGTGGTGCATACCTTGCGGCAGGTGGTTTGT 136880 Query 37501 GTGAAGGG 37508 || ||||| Sbjct 136881 GTTAAGGG 136888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138841208094736