Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_023006.1
Length=43564
Score E
Sequences producing significant alignments: (Bits) Value
seq78640 145 2e-30
>seq78640
Length=167548
Score = 145 bits (160), Expect = 2e-30
Identities = 253/368 (69%), Gaps = 0/368 (0%)
Strand=Plus/Plus
Query 37141 AAAGAAAATCACTTCGGCGCAAACGTGCTGGTTACCCGCAAAGGTGCTGTTCGGGCCCGC 37200
|||||| | |||| ||||| | || | || || || ||||| || || || || |||
Sbjct 136521 AAAGAAGAGCACTACGGCGAGGAAGTATTTGTCACACGTAAAGGCGCGGTACGTGCTCGC 136580
Query 37201 GAGGGCGACCTGGGCATCATCCCTGGCTCGATGGGTGCGAAGTCATTCATCGTTCGCGGC 37260
| ||||| || ||||||||||| || |||||||| || || || ||||| |||||
Sbjct 136581 GTTGGCGAATACGGTATCATCCCTGGGTCAATGGGTGCAAAATCCTTTATCGTGCGCGGT 136640
Query 37261 AAGGGAAATTCCGAATCGTTCTGCTCTTGCAGCCACGGTGCCGGTCGAATGATGAGCCGG 37320
|| || || || || || ||||||||| || || || ||||| ||||| ||
Sbjct 136641 AAAGGTAACGAAGAGTCCTTTTGCTCTTGCTCGCATGGCGCAGGTCGCGTGATGTCACGT 136700
Query 37321 GCCGAAGCAAAACGCCGGTTCACAGTCGAGGATCATGAGGCGGCCACCAAAGGTATCGAG 37380
| || || ||| || || | | ||||| ||| || |||| | ||
Sbjct 136701 ACTGAGGCGAAAAAATTATTTACGATAGCCGATCAAATCGCGCAGACTGAAGGCGTAGAA 136760
Query 37381 TGCCGCAAAGATGCCGAAGTGATCGACGAGACGCCAGCGGCTTACAAGGACATCGATGCG 37440
||||||||||| || || || || || |||| ||||| || |||||| |||||||||
Sbjct 136761 TGCCGCAAAGACGCTGAGGTTATTGATGAGATTCCAGCAGCATACAAGAACATCGATGAC 136820
Query 37441 GTCATGGCCGCGCAATCCGCCCTGGTGGACATCGTGCACACGCTGCGCCAAGTCGTTTGC 37500
|| ||| ||||||| || | |||| || | ||||| || |||| || || |||||
Sbjct 136821 GTGATGAACGCGCAAAGCGACTTGGTAGAAGTGGTGCATACCTTGCGGCAGGTGGTTTGT 136880
Query 37501 GTGAAGGG 37508
|| |||||
Sbjct 136881 GTTAAGGG 136888
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 138841208094736
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |