Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq78792 102 1e-16 seq210337 100 4e-16 >seq78792 Length=14290 Score = 102 bits (112), Expect = 1e-16 Identities = 158/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | ||||| |||| || || ||||| || | || || ||| | | Sbjct 11444 TGCAGATCTTCGTGAAAACCCTAACGGGGAAGACAATAACCCTAGAGGTTGAATCTTCGG 11503 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || || | ||||| ||| || || ||| || ||||| |||||||| || || | Sbjct 11504 ACACAATCGACAATGTGAAAGCGAAGATCCAAGACAAGGAAGGAATTCCACCGGACCAGC 11563 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | | || ||||| || |||||||| || || ||||| | | ||||| || | Sbjct 11564 AACGTTTGATCTTTGCCGGAAAACAATTGGAAGACGGAAGAACACTCGCCGATTACAACA 11623 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | || || |||||||| | |||||||| | |||||||||||||| Sbjct 11624 TCCAGAAGGAATCGACGCTTCATTTAGTTCTGCGATTAAGAGGAGG 11669 >seq210337 Length=1863 Score = 100 bits (110), Expect = 4e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || || || ||||| || || ||||| | || || || | Sbjct 583 TGCAAATCTTTGTGAAGACTTTGACAGGCAAGACTATTACCTTGGAGGTTGAGAGCTCGG 524 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| | ||||| || |||||| || |||||||| || || || || |||| Sbjct 523 ACACTATTGATAATGTGAAGGCTAAAATTCAGGACAAAGAAGGGATCCCTCCGGACCAAC 464 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | |||||||| || || |||||||| | || ||| | | || || | ||||| |||| Sbjct 463 AGAGACTCATCTTCGCTGGTAAACAGCTTGAGGATGGTCGGACTTTGGCGGATTACAATA 404 Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239 | || |||||||||||| | ||||| || Sbjct 403 TTCAGAAAGAATCGACTCTTCATTTGGT 376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 783540329065760