Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_023499.1
Length=42906
Score E
Sequences producing significant alignments: (Bits) Value
seq243213 89.7 1e-13
>seq243213
Length=9437
Score = 89.7 bits (98), Expect = 1e-13
Identities = 154/221 (70%), Gaps = 2/221 (1%)
Strand=Plus/Plus
Query 15085 TTTGTCAATTTAAGTGCAACAGTTCATCACATAAAACTTCATAAGGAAACTTCCAATTTA 15144
|||||||| ||||| |||||| ||| || | || || || || | | ||||||| |
Sbjct 8515 TTTGTCAAATTAAGCGCAACACTTCTTCGGAAAAGACCTCGTATGCAGTTTTCCAATCCA 8574
Query 15145 AACACTTTCTTGGTCGATAATTAATTGAGTCTAATGCATAGT-TAAGTTGCTCTTGATTT 15203
|||||||||||||||||| || ||| | ||| || | ||| | ||||| ||
Sbjct 8575 AACACTTTCTTGGTCGATTGTTGATTCTAGAAAGTGCGTAATCTAATTCTGTCTTG-TTG 8633
Query 15204 ACTTTAGCTAAGTCTGTTTTCTTAGGGAAAAATTCTCTTAGTAAACCATTGGTATTTTCA 15263
| | | |||| ||| ||| ||||| || || | || | |||||| | ||| |||
Sbjct 8634 ATCATTCCGAAGTTGGTTCCCTTTGGGAAGAACTCACGGAGAAGACCATTTGCATTCTCA 8693
Query 15264 TTTGTACCTCTTTGCCATGCGGAATATGGATCAGCGAAGTA 15304
|| | || | |||||||| ||||| ||||| || |||||
Sbjct 8694 TTGCTGCCACGTTGCCATGAAGAATAGGGATCCGCAAAGTA 8734
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 136742289863648
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |