Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_023499.1 Length=42906 Score E Sequences producing significant alignments: (Bits) Value seq243213 89.7 1e-13 >seq243213 Length=9437 Score = 89.7 bits (98), Expect = 1e-13 Identities = 154/221 (70%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 15085 TTTGTCAATTTAAGTGCAACAGTTCATCACATAAAACTTCATAAGGAAACTTCCAATTTA 15144 |||||||| ||||| |||||| ||| || | || || || || | | ||||||| | Sbjct 8515 TTTGTCAAATTAAGCGCAACACTTCTTCGGAAAAGACCTCGTATGCAGTTTTCCAATCCA 8574 Query 15145 AACACTTTCTTGGTCGATAATTAATTGAGTCTAATGCATAGT-TAAGTTGCTCTTGATTT 15203 |||||||||||||||||| || ||| | ||| || | ||| | ||||| || Sbjct 8575 AACACTTTCTTGGTCGATTGTTGATTCTAGAAAGTGCGTAATCTAATTCTGTCTTG-TTG 8633 Query 15204 ACTTTAGCTAAGTCTGTTTTCTTAGGGAAAAATTCTCTTAGTAAACCATTGGTATTTTCA 15263 | | | |||| ||| ||| ||||| || || | || | |||||| | ||| ||| Sbjct 8634 ATCATTCCGAAGTTGGTTCCCTTTGGGAAGAACTCACGGAGAAGACCATTTGCATTCTCA 8693 Query 15264 TTTGTACCTCTTTGCCATGCGGAATATGGATCAGCGAAGTA 15304 || | || | |||||||| ||||| ||||| || ||||| Sbjct 8694 TTGCTGCCACGTTGCCATGAAGAATAGGGATCCGCAAAGTA 8734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136742289863648