Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_023571.1 Length=46243 Score E Sequences producing significant alignments: (Bits) Value seq64498 84.2 6e-12 >seq64498 Length=562 Score = 84.2 bits (92), Expect = 6e-12 Identities = 223/339 (66%), Gaps = 4/339 (1%) Strand=Plus/Plus Query 34200 ATTACTTTCCAAAAGTTCAGACACCTAAAGGTTCAATCGTTGCTTTGGATGTTGAATCAG 34259 ||| ||| || ||||||| ||||| ||||| ||||| ||||| | || ||| | | Sbjct 154 ATTTCTTGCCTGAAGTTCAAACACCAAAAGGGTCAATTGTTGCACTTGACTATGAGGCCG 213 Query 34260 GCAATCCA--AACACGGCCAGTGTTAAATATGCCTTGGACAAAATCCAAGCAGCTGGTTA 34317 | ||| | |||||||| | | | || | ||| | |||| | |||||||| Sbjct 214 G--ATCAACCAACACGGCAACCTTGCTGTGGGCACTCGACTATATCCGTGATGCTGGTTA 271 Query 34318 CACAGCTGTCTTATATGGTTATAAGTCTTTTTTAATCAGTCATCTTGACCTTACGAATTT 34377 |||| | | | || || |||||| ||| || || || || || || | | | | Sbjct 272 CACACCAATGCTTTACGGGTATAAGAGTTTCTTGATGAGCCACATTAACTTGTCACAGAT 331 Query 34378 GGCTAAGGCATATCCCTTATGGATGGCTGAATATCCTAATTACAACGTAACGACTAGTCC 34437 |||| |||| | ||| | || ||||||||| ||||||| ||||| || || Sbjct 332 TGCTAGTCGCTATCAACTGTGGCTTGCCGAATATCCTGATTACAATGTAACCACCGTGCC 391 Query 34438 CAACTATAATTACTTTCCAAGTTTTAATAATATCCATCTATTTCAATTCACTAGTACCTA 34497 || ||| ||||| || |||||| ||||| | | | || || ||||| ||||| Sbjct 392 GAATTATGGCTACTTCCCGAGTTTTGATAATGTAGGTATCTTCCAGTTCACGTCAACCTA 451 Query 34498 TAAAGCCGGTGGCTTAGATGGTGACGTTGATTTAACTGG 34536 | || || || | ||||| |||||||| ||||||| Sbjct 452 TCGCGCTGGCGGTCTTGATGGCAACGTTGATCTAACTGG 490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147386803749880