Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_023571.1
Length=46243
Score E
Sequences producing significant alignments: (Bits) Value
seq64498 84.2 6e-12
>seq64498
Length=562
Score = 84.2 bits (92), Expect = 6e-12
Identities = 223/339 (66%), Gaps = 4/339 (1%)
Strand=Plus/Plus
Query 34200 ATTACTTTCCAAAAGTTCAGACACCTAAAGGTTCAATCGTTGCTTTGGATGTTGAATCAG 34259
||| ||| || ||||||| ||||| ||||| ||||| ||||| | || ||| | |
Sbjct 154 ATTTCTTGCCTGAAGTTCAAACACCAAAAGGGTCAATTGTTGCACTTGACTATGAGGCCG 213
Query 34260 GCAATCCA--AACACGGCCAGTGTTAAATATGCCTTGGACAAAATCCAAGCAGCTGGTTA 34317
| ||| | |||||||| | | | || | ||| | |||| | ||||||||
Sbjct 214 G--ATCAACCAACACGGCAACCTTGCTGTGGGCACTCGACTATATCCGTGATGCTGGTTA 271
Query 34318 CACAGCTGTCTTATATGGTTATAAGTCTTTTTTAATCAGTCATCTTGACCTTACGAATTT 34377
|||| | | | || || |||||| ||| || || || || || || | | | |
Sbjct 272 CACACCAATGCTTTACGGGTATAAGAGTTTCTTGATGAGCCACATTAACTTGTCACAGAT 331
Query 34378 GGCTAAGGCATATCCCTTATGGATGGCTGAATATCCTAATTACAACGTAACGACTAGTCC 34437
|||| |||| | ||| | || ||||||||| ||||||| ||||| || ||
Sbjct 332 TGCTAGTCGCTATCAACTGTGGCTTGCCGAATATCCTGATTACAATGTAACCACCGTGCC 391
Query 34438 CAACTATAATTACTTTCCAAGTTTTAATAATATCCATCTATTTCAATTCACTAGTACCTA 34497
|| ||| ||||| || |||||| ||||| | | | || || ||||| |||||
Sbjct 392 GAATTATGGCTACTTCCCGAGTTTTGATAATGTAGGTATCTTCCAGTTCACGTCAACCTA 451
Query 34498 TAAAGCCGGTGGCTTAGATGGTGACGTTGATTTAACTGG 34536
| || || || | ||||| |||||||| |||||||
Sbjct 452 TCGCGCTGGCGGTCTTGATGGCAACGTTGATCTAACTGG 490
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 147386803749880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |