Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_023599.1 Length=38772 Score E Sequences producing significant alignments: (Bits) Value seq255890 1366 0.0 seq123612 803 0.0 seq158858 170 5e-38 >seq255890 Length=19928 Score = 1366 bits (1514), Expect = 0.0 Identities = 1454/1916 (76%), Gaps = 2/1916 (0%) Strand=Plus/Plus Query 22262 TGTTAGAAAGATATCTTGTACGAAATGATTATGTATCAGCGGCTAAATTATTATCCAATG 22321 ||||||||| ||||||| ||||||| |||| |||| || ||| | ||| ||| Sbjct 17046 TGTTAGAAAAGCATCTTGTGAAAAATGATCATGTTGCAGCAGCGAAACTTTTAAGTGATG 17105 Query 22322 GGATTCATTATGGAGTGAAAATTGGTGGAGTGGGATTCATTACCTATGTATTTTTTCGAA 22381 | || |||||||| ||| || |||||||| | |||||| |||||||| ||| || Sbjct 17106 GAATATATTATGGAATGAGGATAGGTGGAGTTTGTTTCATTGGTTATGTATTCATTCAAA 17165 Query 22382 TTATAATTATGTTCTAGG-AGGCTTGT-CATGGGAATCATAAAAGAATGGCTTCATAAGA 22439 || | ||||| |||| ||| | |||||| || |||| || ||||||||||| Sbjct 17166 TTGTGGAGATGTTTTAGGGAGGAAATTACATGGGGATTTTAAAGGATTGGCTTCATAAAC 17225 Query 22440 GGTCTTTAAAACACCAGATTATTGAGGTGTTCCAAAAGGCAGGCTTATATACGGAACATC 22499 ||| || | | |||| ||||| || ||||||||| |||||| || |||| Sbjct 17226 AAAGTTTGAAGAATCGACTTATAGAGGTATTTGTAAAGGCAGGTTTATATGTAGACCATC 17285 Query 22500 AAACACGTGGAGGGAAAATCCCAATTTATCCAAAGGTTCATGCTGTTTTTTCTTCAAACG 22559 ||||| | || || ||| | || ||||| || ||| | |||| ||||||| || || | Sbjct 17286 AAACAAGAGGTGGAAAAGTACCCATTTACCCGAAGATACATGACATTTTTTCCTCGAAAG 17345 Query 22560 AAAGCGTGAAATATGTATTTACTATCCCCAATGGATTAGATCCAAAGACAATTGAAAAGA 22619 ||| || ||| ||||||| || || || ||||||||||| || | |||||||||| Sbjct 17346 AAAAGGTTCGATACATATTTACCATTCCAAACGGATTAGATCCGAAAAACATTGAAAAGA 17405 Query 22620 AATGGTTTTGCTTTCAACAAATATTTGGACGGAATGTAGCAATTGAGGGAGATATTAAAA 22679 | ||||||||||||||||||||||| || || |||||||||||||| || |||||||||| Sbjct 17406 AGTGGTTTTGCTTTCAACAAATATTAGGGCGTAATGTAGCAATTGAAGGTGATATTAAAA 17465 Query 22680 AGTTTGTGCTCAATGTATTTCATTCTGATGGTGGTTTGAAACAATACAACTACAGCTATA 22739 |||||| || ||||| |||||||| |||| ||| | || |||||| ||||| |||| Sbjct 17466 GGTTTGTACTTAATGTGTTTCATTCGGATGCTGGGCTACAAGCATACAATTACAGTTATA 17525 Query 22740 AGCAATGGCAACCATTTATAAAAGAATGCCGTCTTCCTGTTATAGTAGGGCGTGACCAGT 22799 || | ||||||||||| | | | || | |||||| || || |||||||||||||| | Sbjct 17526 AGAAGTGGCAACCATTACTTATACAACATCATCTTCCCGTAATTGTAGGGCGTGACCAAT 17585 Query 22800 TTGGAAACATGCTTGTTTATGATATGGTAAACCCCAATACACCCCATTTACTAATTGCAG 22859 ||||||| ||| || ||||| ||| | | || || || ||| | |||||||||| Sbjct 17586 TTGGAAATATGATTACGTATGACATGATTGCTTCAAACACGCCGCATCTTCTAATTGCAG 17645 Query 22860 GAGAAACAGGTAGCGGAAAAAGTAGTATGGTACGTGTTGTACTTTCTACACTCATTCAAT 22919 |||| ||||| ||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct 17646 GAGAGACAGGGAGCGGAAAAAGTAGTATGGTACGCGTTGTACTGTCCACACTCATTCAAT 17705 Query 22920 ACATGCCTCCTGATAAATTATATTTGTACCTAGGTGACTTGAAAAACTCTGAATTTCATT 22979 | ||| |||||||||||||| |||||||||| ||||| ||||| || || |||||||||| Sbjct 17706 ATATGTCTCCTGATAAATTACATTTGTACCTGGGTGATTTGAAGAATTCCGAATTTCATT 17765 Query 22980 TCTTGCGTAGAGTAAAACATGTGAAAGAAGTGTGCATGGAAGAAATCGAAATGAAAGTCA 23039 ||||||| || || ||||| || ||||| || |||||||||||||| |||||||| | | Sbjct 17766 TCTTGCGAAGGGTGAAACACGTAAAAGAGGTTTGCATGGAAGAAATAGAAATGAAGATTA 17825 Query 23040 TGCTTCATAAGGTTTGGAATGAAATCAGGGAACGCAGAAAGCTCATGGAAGAATATGAAG 23099 |||| || || || ||||| ||||| | ||||| ||||| | |||||||| ||||||| Sbjct 17826 TGCTGCAGAAAGTGTGGAAGGAAATACGCGAACGTAGAAAATTGATGGAAGAGTATGAAG 17885 Query 23100 TGGATCACATTGATGAGTATAACAAATTAAATCCTGATAAACAGAAACTCTATATTCTGT 23159 | ||||| ||||| || || |||||||||||||||||||| ||||||| ||||| | Sbjct 17886 TAGATCATATTGACGAATACAACAAATTAAATCCTGATAATCAGAAACCATATATCTTAC 17945 Query 23160 TAGCTATCGATGAAGTAGCGATGCTACAAGATGAAAAAGAATGTATGACGACAATAGAAA 23219 | |||||||| ||||| | ||| | ||||||||||||||||||||| | | | | |||| Sbjct 17946 TTGCTATCGACGAAGTGGTCATGTTGCAAGATGAAAAAGAATGTATGTCTATAGTTGAAA 18005 Query 23220 AAATATCGGCAGTTGGTCGGTCGCTAGGTGTATTCCTTATGCTATCTATGCAAAGACCAG 23279 ||||||||||||| || || | || || || || | |||||| ||||||| | || | Sbjct 18006 AAATATCGGCAGTCGGAAGGGCACTTGGAGTTTTTTTAATGCTAAGTATGCAACGCCCTG 18065 Query 23280 ACGCAAAGGTGTTAGATGGTAAGTTAAAGCTAAATATGACGGTTAGAATGGGCTTTAAAT 23339 | ||||| || | ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 18066 ATGCAAAAGTACTGGATGGTAAGTTAAAGCTCAATATGACGGTTAGAATGGGCTTTAAAT 18125 Query 23340 GCGATAACACAATTAATAGTAACATCATGGGTACACCTGGATCAGAGCAATTAGAGCAAT 23399 | |||| |||||||| ||||| || |||||||| ||||| ||||| | || ||||||| Sbjct 18126 GTGATAGTACAATTAACAGTAATATTATGGGTACTCCTGGTTCAGAACGCTTGGAGCAAT 18185 Query 23400 CTGGACAAATGATTCTAAAGTTAAATGGATTAAAGAAAGTGCAAGCTCCATATTTAGAAT 23459 |||| |||||||| ||||||||||||||||||||||||| ||| |||| |||||||||| Sbjct 18186 CTGGCCAAATGATATTAAAGTTAAATGGATTAAAGAAAGTACAATCTCCTTATTTAGAAT 18245 Query 23460 TAAATAAAGCAAAGCAAATAGTTGAACCTTACCGTTTACTCAAAGAAGATATGAGGCTTC 23519 ||| |||||| ||| | |||||||||||||| || | | ||||| |||| | | | | Sbjct 18246 TAAGTAAAGCCAAGAAGATAGTTGAACCTTATCGCGTTCCGAAAGAGAATATAAAGTTGC 18305 Query 23520 AGAATTCGTCAAAACAAGAACTTCCATTGTTTGGAGTGTTGGAACATGAAGAGTAGAGAT 23579 | || || || ||||| || ||| || || ||||| || |||| || |||||| Sbjct 18306 AAAACCTACCACAAGAAGAAAATCAATTATTCGGGGTGTTAGATTATGAGGAATAGAGAC 18365 Query 23580 AAAGCGATTATAAAAGACTTATGCCGCTTTAGATGCCTATCACGAGATGATATTATCGAT 23639 ||||| || |||| | || | |||||||| | || || ||||| ||||| ||| Sbjct 18366 AAAGCCATACTAAACAATTTGAAGCTTTTTAGATGTATGTCTCGTGATGACATTATTGAT 18425 Query 23640 TTGCATTTTCAAGGACTCAAGAAAGCTGTGACCAGTTGCAATACGGTTATGAAACGATTA 23699 ||||||||||||||| | ||||| || || || | || |||||||| ||||| |||||| Sbjct 18426 TTGCATTTTCAAGGATTAAAGAACGCGGTTACATGCTGTAATACGGTGATGAAGCGATTA 18485 Query 23700 AGGCGAGATGGGAGCGTGGACGTAAATGTGTTACAGAAACCATATATCTACTTTCCACAA 23759 || ||||||| ||||| | ||| | | || | ||||| || ||||| || ||| Sbjct 18486 AGAAGAGATGGTCATGTGGATGCCAATATCTCGCAACAGCCATACATTTACTTCCCTCAA 18545 Query 23760 CCAAGTCCGATTCGAAAAACAAGTCAAAAGATTCCGCACTTCCTTGCTATTGTGAATGTA 23819 | || | |||| ||||| || ||||||||||| ||||| || | || | ||||| Sbjct 18546 TCCAGCACACTTCGCAAAACTAGCCAAAAGATTCCCCACTTTCTAGGCATATTAGATGTA 18605 Query 23820 TATAAGCAACTTCTTCAGTACGAAAAGCCTAAATTGTTTAAAGTCGAGCCGAAGTATGGT 23879 ||||| || ||| | | || ||||| |||||| |||||||||| ||||| ||||| ||| Sbjct 18606 TATAAACAGCTTATCTATTATGAAAAACCTAAACTGTTTAAAGTGGAGCCAAAGTACGGT 18665 Query 23880 AAAGCATATATGGAGCCAGACATATTTGCAATTTGGCGACAATCTCCATTTTTCATAGAA 23939 |||| || ||||| || || |||| |||||||||| ||||||||| ||||| ||| Sbjct 18666 AAAGAATTCATGGAACCTGATGCATTTACAATTTGGCGTAGATCTCCATTCTTCATTGAA 18725 Query 23940 GTTCAGAATTCGGTATACAGTAAGAAAGTAATGCAAGAGAAATTAAACCGATATGAATTT 23999 || |||| || || ||||| || ||||| |||||||| ||| |||| | |||||||| Sbjct 18726 GTCCAGAGGTCAGTTTACAGCAAAAAAGTTATGCAAGATAAAATAAATAGGTATGAATTA 18785 Query 24000 TACTTTCATAGTTTGGAATGGCAGCGAGAACTATGGCAACCCAAGAAATCGAAATACTTC 24059 ||||| || ||| ||||||||| ||| ||||| || || |||| |||||||| Sbjct 18786 TACTTCCACAGTCAGGAATGGCATAACGAATCTTGGCAGCCAAAAGAATCTAAATACTTT 18845 Query 24060 CCTTCTCTTCTGGTAATTACCGATAGCCAGTATGACATCTCCTCTTCAAATTTTCGCATA 24119 || || | || ||||||| || | | ||| | ||| ||||| | | || || Sbjct 18846 CCATCAATACTTATAATTACTGAAAAGTATTATAATATCAGCTCTTTTAGCCTACGTATT 18905 Query 24120 TTTCAAGCTAAATCCATTCACGATTTCATGAATCAAATGGTTGTTAAGGCGTAGTA 24175 ||||||||| || ||| ||||| ||||| | ||||| || || |||| Sbjct 18906 TTTCAAGCTTCTTCAATTAGTAATTTCTTGAATAGCCTTGTTGTAAAAGCACAGTA 18961 >seq123612 Length=52173 Score = 803 bits (890), Expect = 0.0 Identities = 1435/2074 (69%), Gaps = 52/2074 (3%) Strand=Plus/Minus Query 22099 ATTCCTTTTCGAGATTTTATGGATGGATCATACAAAATGAAAGAGCAGAAAATACAAAGA 22158 ||| |||||| || |||||||| ||| || || | |||| |||| | || | | | | Sbjct 49069 ATTTCTTTTCAAGCCTTTATGGACCAATCTTATAAGAAGAAAAAGCAAACAAAA-ATATA 49011 Query 22159 TATCATT----CATTAAGCTCGTTAGCATTTGTTCGTATGTCGGATTCTATTTTAAATAC 22214 || |||| | | || | || |||||| ||| |||||| | || | |||| Sbjct 49010 TAGCATTGGCCCTATTAGTCCATTCGCATTTTTTCATATGTCATCACCACTTATTCATAC 48951 Query 22215 GTATCTGGCATTAGGGATAATGGGAACGGCTTTA--ATTGGGGCAGTCATGTTAGAAAGA 22272 |||| | || | || ||| | || |||| ||| ||||| || || |||| |||| | Sbjct 48950 GTATGTAGCCCTGGGAATAGTAGG--CGGCCTTACAATTGGAGCTGTTTTGTTGGAAAAA 48893 Query 22273 TATCTTGTACGAAATGATTATGTATCAGCGGCTAAATTATTATCCAATGGGATTCATTAT 22332 || | ||||||||||||||||| | || | || | | || ||||| | |||| Sbjct 48892 TACTTAGTACGAAATGATTATGTTTTTGCATCCAATCTCCTTTCTAATGGTCTGTATTAC 48833 Query 22333 GGAGTGAAAATTGGTGGAGTGGGATTCATTACCTATGTATTTTTTCGAATTATAATTATG 22392 || || | |||||| || | || |||||| |||| ||| |||| ||| || | ||| Sbjct 48832 GGTGTAAGAATTGGAGGGATTGGGTTCATTGGTTATGCGTTTATTCGCATTTTACTCATG 48773 Query 22393 TTCTA-GGAGGCTTGTCATGGGAATCATAAAAGAATGGCTTCATAAGAGGTCTTTAAAAC 22451 || || ||||| || | | || |||| |||| | | |||| | ||| Sbjct 48772 TTATAAGGAGGGTT--------ACTAATGAAAGGATGGTTAAAAAAGAAAAAATATAAAT 48721 Query 22452 ACCAGATTATTGAGGTGTTCCAAAAGGC-AGGCTTATATACGGAACATCAAACACGTGGA 22510 | ||| | || || || | || || | ||| |||| || || ||||| || Sbjct 48720 ATCAGTTAGAAGAAGTATTTAAGAAAGCGAAGCT-ATATGATGAGCACATGACACGAGGT 48662 Query 22511 GGGAAAATCCCAATTTATCCAAAGGTTCATGCTGTTTTTTCTTCAAACGAAAGCGTGAAA 22570 || || |||| |||||||| | | |||||| ||| | ||| ||||| || Sbjct 48661 GGAAAGGTCCCCATTTATCCTACGATTCATGATGTATACGAAGGAAAGGAAAGTGTACGG 48602 Query 22571 TATGTATTTACTATCCCCAATGGATTAGATCCAAAGACAATTGAAAAGAAATGGTTTTGC 22630 || ||||| | || ||||| | |||||| |||| | ||||||||||| || Sbjct 48601 TACACTTTTACACTACCTAATGGCGTTGATCCAGCTCAAATTCATAAGAAATGGTTCTGT 48542 Query 22631 TTTCAACAAATATTTGGACGGAATGTAGCAATTGAGGGAGATATTAAAAAGTTTGTGCTC 22690 ||||| |||||| | || ||| || || || || |||||||||||| || ||| Sbjct 48541 TTTCAGCAAATACTAGGTGAAAATCTAATGATGGAAGGTACTATTAAAAAGTTCGTACTC 48482 Query 22691 AATGTATTTCATTCTGATGGTGGTTTGAAACAATACAACTACAGCTATAAGCAATGGCAA 22750 |||||||||||||| ||| |||| | | ||| | ||||| ||||| ||||||||| Sbjct 48481 CATGTATTTCATTCTAATGCAAGTTTACAGCCTTACGATTACAGTTATAAACAATGGCAA 48422 Query 22751 CCATTTATAAAAGAATGCCGTCTTCCTGTTATAGTAGGGCGTGACCAGTTTGGAAACATG 22810 ||||| ||||| | ||||||||||| ||||||| || ||||| || ||||| | Sbjct 48421 CCATTATTAAAACCGTATCGTCTTCCTGTGGTAGTAGGACGGGACCAATTCGGAAATACA 48362 Query 22811 CTTGTTTATGATATGGTAAACCCCAATACACCCCATTTACTAATTGCAGGAGAAACAGGT 22870 |||| ||||||||||| | | |||||||| |||||||||||||| ||||||||||| Sbjct 48361 ATTGTGTATGATATGGTTGATTCAAATACACCTCATTTACTAATTGCGGGAGAAACAGGA 48302 Query 22871 AGCGGAAAAAGTAGTATGGTACGTGTTGTACTTTCTACACTCATTCAATACATGCCTCCT 22930 |||||||||||||||||||| || || | | | ||| | || ||| | ||| | || Sbjct 48301 AGCGGAAAAAGTAGTATGGTGCGCGTAATTTTAGCCACATTAATCCAACATATGTCACCA 48242 Query 22931 GATAAATTATATTTGTACCTAGGTGACTTGAAAAACTCTGAATTTCATTTCTTGCGTAGA 22990 || | ||| |||||||||| || || || ||||| || || |||||||| || | ||| Sbjct 48241 GAGCATTTACATTTGTACCTGGGGGATTTAAAAAATTCAGAGTTTCATTTTTTAAGAAGA 48182 Query 22991 GTAAAACATGTGAAAGAAGTGTGCATGGAAGAAATCGAAATGA-AAGTCATGCT-TCATA 23048 || || || || || | || |||||||||||| ||||||| |||| ||| | ||| | Sbjct 48181 GTGAAGCACGTAAAGTATGTTTGCATGGAAGAACATGAAATGACAAGT-ATGTTATCAAA 48123 Query 23049 AGGTTTGGAATGAAATCAGGGAACGCAGAAAGCTCATGGAAGAATATGAAGTGGATCACA 23108 | | ||||| || | | | | |||||| | |||||||||||||| ||| ||| | Sbjct 48122 AT-TGTGGAAAGAGGTATTGCATAGAAGAAAGTTAATGGAAGAATATGAGCTGGGTCATA 48064 Query 23109 TTGATGAGTATAACAAATTAAATCCTGATAAACAGAAACTCTATATTCTGTTAGCTATCG 23168 ||||||| || || || ||| ||||||| || ||||||| | | || || | Sbjct 48063 TTGATGAATACAATCAAATAACAAAAGATAAACCCTTACCCTATATTTTTATTGCCATTG 48004 Query 23169 ATGAAGTAGCGATGCTACAAGATGAAAAAGAATGTATGACGACAATAGAAAAAATATCGG 23228 |||||||||| |||||||| || ||||| |||||| | || | ||||||||||||||| | Sbjct 48003 ATGAAGTAGCAATGCTACAGGACGAAAAGGAATGTGTCACCATAATAGAAAAAATATCAG 47944 Query 23229 CAGTTGGTCGGTCGCTAGGTGTATTCCTTATGCTATCTATGCAAAGACCAGACGCAAAGG 23288 | || || | ||||| ||| | ||||| |||||| ||||||| | ||||| ||||| Sbjct 47943 CTGTCGGCAGATCGCTTGGTATCTTCCTCATGCTAAGTATGCAACGTCCAGATGCAAAAA 47884 Query 23289 TGTTAGATGGTAAGTTAAAGCTAAATATGACGGTTAGAATGGGCTTTAAATGCGATAACA 23348 | | ||||||||||||||||| ||| ||||||| ||||||||||||||||| | || Sbjct 47883 TACTGGATGGTAAGTTAAAGCTCAATTTGACGGTAAGAATGGGCTTTAAATGTGCAGACT 47824 Query 23349 CAATTAATAGTAACATCATGGGTACACCTGGATCAGAGCAATTAGAGCAATCTGGACAAA 23408 |||||| |||||||| |||| || ||||||||||| | ||| ||||| || |||| Sbjct 47823 TAATTAACAGTAACATTGTGGGGACGCCTGGATCAGAAAATTTAAGTCAATCGGGCCAAA 47764 Query 23409 TGATTCTAAAGTTAAATGGATTAAAGAAAGTGCAAGCTCCATATTTAGAATTAAATAAAG 23468 ||||| |||| ||| |||| ||||| || ||||| ||||| | ||| | ||| | | | Sbjct 47763 TGATTTTAAAATTAGATGGTTTAAAAAAGGTGCAGGCTCCTTTTTTGGCATTGGACCAGG 47704 Query 23469 CAAAGCAAATAGTTGAACCTTACCGTTTA-CT------CAAAG----AAGATATGAGGCT 23517 |||| ||||| | ||||| || |||||| || ||||| |||| | || | Sbjct 47703 CAAAAGAAATAATAGAACCGTATCGTTTATCTAAAGAGCAAAGTGTAAAGA-AGGAAGAG 47645 Query 23518 TCAGAATTCGTCAAAACAAGAACTTCCATTGTTTGGAGTGTTGGAACATG---AAGAGTA 23574 ||||| | | | |||| | | | ||||| ||||| || ||| | || || Sbjct 47644 TCAGAGT-------ATCGAGAAGATAAAATCTTTGGGGTGTTAGATGATGCTAACGAATA 47592 Query 23575 GAGATAAAGCGATTATAAAAGACTTATGCCGCTTTAGATGCCTATCACGAGATGATATTA 23634 ||||||| |||||| | ||| | |||||||| | || || |||||||||| Sbjct 47591 GAGATAAGCAAATTATATGCCATTTACAACAATTTAGATGTATGTCGCGTGATGATATTA 47532 Query 23635 TCGATTTGCATTTTCAAGGACTCAAGAAAGCTGTGACCAGTTGCAATACGGTTATGAAAC 23694 | ||| | |||||| | | || || || || || | || ||||| |||| || | Sbjct 47531 TTGATCTTCATTTTAGAAATGTTAAAAATGCAGTAACATGCTGTAATACTGTTACAAAGC 47472 Query 23695 GATTAAGGCGAGATGGGAGCGTGGACGTAAATGTGTTACAGAAACCATATATCTACTTTC 23754 ||||||| || || || | || ||| || | ||| ||||| | || |||| Sbjct 47471 GATTAAGCCGCGAAGGATATATTGATGTAGATACATCACAACGTCCATACGTGTATTTTC 47412 Query 23755 CACAACCAAGTCCGATTCGAAAAACAAGTCAAAAGATTCCGCACTTCCTTGCTATTGTGA 23814 | | |||| | | ||||| ||| ||| |||||||| | || || | || ||||| Sbjct 47411 CTTATCCAAATACCATTCGTAAAGGAAGCCAAAAGATACGTCATTTTTTAGCGATTGTAG 47352 Query 23815 ATGTATATAAGCAACTTCTTCAGTA-CGAAAAGCCTAAATTGTTTAAAGTCGAGCCGAAG 23873 |||||||||||| | || || | | ||||| || || | ||| |||| || || ||| Sbjct 47351 ATGTATATAAGC-AGTTATTACGAACCGAAAGACCGAAGATATTTCAAGTAGAACCTAAG 47293 Query 23874 TATGGTAAAGCATATATGGAGCCAGACATATTTGCAATTTGGCGACAATCTCCATTTTTC 23933 ||| |||| |||||||| || || |||||| | |||||||| || ||||||||| Sbjct 47292 TATAAGAAAGGTTATATGGAACCCGATATATTTACCATTTGGCGTAAAAGTCCATTTTTT 47233 Query 23934 ATAGAAGTTCAGAATTCGGTATACAGTAAGAAAGTAATGCAAGAGAAATTAAACCGATAT 23993 |||||||| ||||| || | || | |||| || ||| |||| |||| || ||| Sbjct 47232 ATAGAAGTCCAGAACTCCATCTATAATAAGGCTACGATCCAAACGAAAATAAAACGTTAT 47173 Query 23994 GAATTTTACTTTCATAGTTTGGAATGGCAGCGAGAACTATGGCAACCCAAGAAATCGAA- 24052 |||| || |||| ||| |||||||| | |||| |||||| |||| | || | Sbjct 47172 GAATCGTATTTTCGTAGCATGGAATGGAAAAAAGAATCGTGGCAA-CCAAAACATAATAT 47114 Query 24053 -ATACTTCCCTTCTCTTCTGGTAATTACCGATAGCCAGTATGACATCTCCTCTTCAAATT 24111 || ||||| |||||| | | |||| || | | ||| ||||| ||| || | Sbjct 47113 GGTATTTCCC-TCTCTTTTAATCCTTACTGACCTCAAATATCCAATCTCTAGTTCTAACT 47055 Query 24112 TTCGCATATTTCAAGCTAAATCCATTCACGATTT 24145 |||| || |||||||| || ||||| |||| Sbjct 47054 TTCGTATTTTTCAAGCGCCCTCTATTCAGCATTT 47021 >seq158858 Length=235449 Score = 170 bits (188), Expect = 5e-38 Identities = 237/332 (71%), Gaps = 0/332 (0%) Strand=Plus/Minus Query 17028 AACCTTTTATTAAAATCAAATGTTAAATATGAGAAAACAGATTATTTAATTAATCAGTAT 17087 ||||| |||||| |||| ||| | | | | ||||||||| | ||||| |||| Sbjct 22245 AACCTATTATTAGAATCCAATATGGACTTCTCAACAACAGATTACCTTATTAAGATGTAT 22186 Query 17088 ACTCTTACTGAAAATTTCTCTACAGGTGAAGAATATACTTTCGTAATGAAAGGAAATGTA 17147 | | | | || ||| ||| || |||| || ||||| || || ||||||| ||| Sbjct 22185 AGTTTGTCCGAGGATTGGATTACTGGACAAGAGTACACTTTTGTTATCAAAGGAACTGTT 22126 Query 17148 CCTGCGGGTCAAAAGTTTGGTATATGGATGAATGGTGGGTCTAGCAATGTTGGATATGCA 17207 ||||| || ||||| |||||||||||| |||||||| || | || || || | || Sbjct 22125 CCTGCAGGACAAAAATTTGGTATATGGCAAAATGGTGGTTCAAATAAAGTAGGGGAAGCC 22066 Query 17208 ACAAGTGTTTATGTGAATGGAATAACGTATGTAACCTTCAAAGCTGTTGCGGCTACAAGT 17267 |||| |||||||||||| |||| |||||||| |||||||| | || | |||| | Sbjct 22065 ACAACAACATATGTGAATGGAGTAACTTATGTAACTTTCAAAGCAATAGCTACAACAACT 22006 Query 17268 GGAAATGAACGAAAGTTAAGCTTATATAATTATCCGAGTAGTACTACGAAATCTATTGTG 17327 || |||||| |||| |||| |||||||| || || | ||| || ||| | ||| Sbjct 22005 GGTAATGAAAGAAAACTAAGTTTATATAACTACCCTCAAAATACCACACTATCCACTGTA 21946 Query 17328 GAATGGGTTGCCTTGTATAAAGGGAATAAGCC 17359 || ||||||||| | || ||||| |||||||| Sbjct 21945 GATTGGGTTGCCCTATACAAAGGAAATAAGCC 21914 Score = 158 bits (174), Expect = 3e-34 Identities = 199/271 (73%), Gaps = 2/271 (1%) Strand=Plus/Plus Query 20126 AAGTGCCCTTATACAATGAATCCAGAATTTATCACAGTCCACAATACGTATAATGATGCG 20185 ||||| |||||| | ||||| |||| | || ||||| || || || |||||||||||| Sbjct 160030 AAGTGTCCTTATTCTATGAAAGCAGAGTACATTACAGTGCATAACACTTATAATGATGCG 160089 Query 20186 CCAGCTGAGAATGAAATTGCTTATATGATACGAAATAATAATGAGGTGTCATTCCACATT 20245 || ||| |||| || | ||| ||||| |||||| ||| ||||| ||||||||| | Sbjct 160090 CCTGCTAAGAACGAGGTAAATTACATGATCGGAAATACTAACGAGGTTTCATTCCACTTC 160149 Query 20246 GCAGTAGACGATAAAGAAGCTGTACAAGGCTTACCTTTAGAACGAAATGCATGGGCTTGT 20305 |||||||| |||| |||| | | ||||| | || | || || ||||| ||| |||| Sbjct 160150 GCAGTAGATGATATCGAAGTTATTCAAGGTATTCCGGTTGATCGTAATGCTTGGCATTGT 160209 Query 20306 GGAGATGGGAATGGTTCAGGCAACAAGAAAGTCGATTGGTGTGGAAATCTGTTATTCTTT 20365 || ||||| |||| || ||| |||| || || ||||| ||||||||||| || || Sbjct 160210 GGTGATGGTGGTGGTAACGGAAAC-CGAAAATCTATCGGTGTTGAAATCTGTTACTCATT 160268 Query 20366 AAGCGGCGGGGAAAGATAT-ATAAAGCAGAA 20395 | || || ||||||| | ||||| ||| Sbjct 160269 ATCTGGTGGTCCAAGATATGAAAAAGCTGAA 160299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123555469244624