Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_023612.1 Length=39078 Score E Sequences producing significant alignments: (Bits) Value seq260187 98.7 2e-16 >seq260187 Length=34880 Score = 98.7 bits (108), Expect = 2e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 33175 GCCCGCGAATTGGATGTTGTTGTCATTGCATTGTCCCAATTAAGCCGGAGCGTTGAGAAC 33234 ||||| ||| | || || |||||||| || ||||| ||| ||| | || |||| | Sbjct 26614 GCCCGTGAACTCGAAGTCCCCGTCATTGCGTTATCCCAGTTATCGCGGGGAGTGGAGAGC 26673 Query 33235 CGACAAGAAAAACGGCCGACAATGAGCGATTTGCGAGAAAGCGGCCAAATTGAGCAAGAT 33294 || || || |||||||||| ||| |||| | || ||| ||| || ||||| ||| Sbjct 26674 CGGCAGGATAAACGGCCGATGATGTCCGATATCCGGGAATCCGGAGCGATCGAGCAGGAT 26733 Query 33295 GCCGATATAATACAATTTTTGTATCGTGATGATTATTATAACCCGGATACCGAAAATAAA 33354 |||||||| | || ||||| || |||||||| || ||| || || ||| || Sbjct 26734 GCCGATATCGTCGCTTTCTTGTACCGCGATGATTACTACAACAAAGAAACGGAAGATGCG 26793 Query 33355 AACATCATTGAGGTTATCGTGGCGAAACACCGAAACGGCCCGACGGG 33401 |||| |||||| | ||| | || || || || || || ||||| || Sbjct 26794 AACACGATTGAGATCATCATCGCCAAGCAGCGGAATGGTCCGACCGG 26840 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124531561917440