Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_024383.1
Length=135831
Score E
Sequences producing significant alignments: (Bits) Value
seq78791 100 2e-16
seq151743 95.1 1e-14
>seq78791
Length=51567
Score = 100 bits (110), Expect = 2e-16
Identities = 307/464 (66%), Gaps = 18/464 (4%)
Strand=Plus/Plus
Query 94044 TCCAGTTGTTTTATAGATACGGTAGATGATAGTTTGCAAGGTATTTACGATAGCAATACA 94103
|| || ||||| || || ||| |||| ||| | | | ||||| ||| | |||
Sbjct 45854 TCAAGCTGTTTCATTGACACGTTAGACGATTCTCTTGAGGGTATCTACTTGAACAACTTT 45913
Query 94104 GATGTTGCTAGAGTTTCTAAGCAAGGCGGAGGCGTAGGAGTCTATATAGGCAATGTAAGG 94163
||||| ||| || || |||| ||||| || | ||||| ||| || ||| | |
Sbjct 45914 GATGTAGCTCGACTTAGTAAGTCTGGCGGTGGACTTGGAGTATATGCTGGAAATATTCGT 45973
Query 94164 TCGTCAGGAGCACCTATTAGAGGAGTTCTC-GGTGCTAGTGGGGGAACGGTACCTTGGAT 94222
| || || |||||| | ||| ||| | || || || || ||| |||||||||||
Sbjct 45974 GCTCTTGGTGCTCCTATTCGTGGA-TTCGCTGGAGCAAGCGGTGGAGTTGTACCTTGGAT 46032
Query 94223 TAAACAATTAAACAATACGGCTGTTAGTGTAGACCAGCTAGG--AGCAAGAAAAGGCGCT 94280
| |||| ||||||| || ||||| |||||||| |||| ||| || || |||
Sbjct 46033 TCGACAACTAAACAACACAGCTGTCTCAGTAGACCAATTAGGTAAGC--GATCTGGAGCT 46090
Query 94281 ATAACTGTAACGTTAGATGTTTTCCACAAAGATATAGAAGCCTTTCTGGATTTAAGACTA 94340
|| | || | || | ||||||||||| | ||||||| || || || ||||
Sbjct 46091 GTAGCGGTTTATCTTGACATCTTCCACAAAGACGTGCAAGCCTTCCTAGACCTACGACTT 46150
Query 94341 AACAATGGAGACCAACGTTTACGGGCTCACGACATT----TTTACTTCTGTTTCTATTCC 94396
| ||| |||||| || ||| ||||| || ||| || ||| || ||||||
Sbjct 46151 AGCAACGGAGACGAAAAAGAACGAGCTCATGAGATTCACCTTGGCTTATG----TATTCC 46206
Query 94397 TGATTTATTTATG-GAA-GCTGTAGAGAATAGAGGGGAATGGTATTTATTTGACCCTTAC 94454
|||||||||||| ||| |||| |||||| | || || ||| || ||||| || ||
Sbjct 46207 AGATTTATTTATGAGAACGCTG-AGAGAAGA-CGGAGAGTGGCATCTATTTTGTCCGTAT 46264
Query 94455 GAGGTTAAGCAGAAAAAAGGTTGGTACCTACAAGACTACTATGA 94498
|| || | || | || ||| | |||||||| | ||| ||
Sbjct 46265 GAAGTAGAAAAGTTTATGGGATGGAAACTACAAGATTGCTACGA 46308
>seq151743
Length=442
Score = 95.1 bits (104), Expect = 1e-14
Identities = 80/95 (84%), Gaps = 4/95 (4%)
Strand=Plus/Plus
Query 41136 CCGTGCTAAATCAGG-CGCA--AGCTTGTAAATGCCTAACGACTAAATTTCTAGGTAGCT 41192
|||||||||||||| || | |||| ||||||||||||||||||||||||| |||||||
Sbjct 309 CCGTGCTAAATCAGCTCGTATGAGCT-GTAAATGCCTAACGACTAAATTTCTGGGTAGCT 367
Query 41193 AACCAAATGGGGTTAGTGAGAACTAGATAAGAAAA 41227
|||||| |||||||||| |||||||||||
Sbjct 368 GGTAAAATGGTACTAGTGAGAACCAGATAAGAAAA 402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433119190441536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |