Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_024391.1 Length=41941 Score E Sequences producing significant alignments: (Bits) Value seq139237 91.5 4e-14 >seq139237 Length=87585 Score = 91.5 bits (100), Expect = 4e-14 Identities = 110/145 (76%), Gaps = 6/145 (4%) Strand=Plus/Minus Query 34987 GTGAATTGCTGGAACACCCTTAGAGTCTTAAT-AACTACAACGTAGTTGGCAACGATAAG 35045 ||||||||||||||| || |||||| ||| || || ||||||| | ||| |||| || Sbjct 42622 GTGAATTGCTGGAACTCCTTTAGAGCCTTGATGTACGACAACGTGGCTGGAAACGGCGAG 42563 Query 35046 CGTGAATGT--TAAAAAATATTAAGAATTGGGCAATCAGCAGCGAAG--CCTCTATGGTA 35101 ||||| || | ||||| | ||| ||||| ||||||||||| ||| ||| || || | Sbjct 42562 CGTGACCGTTCTGAAAAACGTCAAGGATTGGACAATCAGCAGCCAAGCACCTGTAGGGAA 42503 Query 35102 ACAGTAGAGGAACGTTCAACGACTA 35126 || | | ||| |||||||||||| Sbjct 42502 AC-CTTGGTGAAGGTTCAACGACTA 42479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133664089114408