Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq70799 131 3e-25 >seq70799 Length=497 Score = 131 bits (144), Expect = 3e-25 Identities = 216/309 (70%), Gaps = 2/309 (1%) Strand=Plus/Minus Query 182998 GAAAAGGCAGAAACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGAGAA 183057 |||||| || |||||||| ||| |||||| | ||||||||||| || | | ||| Sbjct 327 GAAAAGTCACGCACACATGATGATCTGTGGAATTCTGCACAAATACAGTTGGTAAAGGAA 268 Query 183058 GGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACAAGA 183117 || || ||||| |||| | || ||||||||||||||||||||||| |||||||| Sbjct 267 GGCAAGATGCACGGTTTCCTTCGCATGTACTGGGCTAAAAAGATACTGGAATGGACTGAT 208 Query 183118 ACTCCGGA-AGATGCTTTGAGTTATAGTATCTATATGAACAATAAGTACGAACTAGACGG 183176 ||||| || ||| || || || || ||| | || | ||||| | ||||| Sbjct 207 ACTCCAGATAGA-GCACTGGCCGATGCCATTTATCTCAATGACAAGTATAGCATGGACGG 149 Query 183177 TACGGATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGATAGAGC 183236 | || || | || | || || ||||||||||| || || || | || ||| | Sbjct 148 TCGCGACCCAAGTGGTTTTGTTGGATGTATGTGGTCAATATGTGGTATTCATGATCAGGG 89 Query 183237 GTGGAAAGAAAGACCTATATTTGGAAAGATAAGATATATGAATTATGAGAGTTCTAAGAA 183296 ||||| ||||||| || |||||||| || || |||||||| ||||| | | |||| Sbjct 88 GTGGAGAGAAAGAGAAATTTTTGGAAAAATTAGGTATATGAACTATGAAGGATGCAAGAG 29 Query 183297 GAAATTTGA 183305 || ||||| Sbjct 28 AAAGTTTGA 20 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 900393490398080