Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq146431 129 1e-24 >seq146431 Length=15796 Score = 129 bits (142), Expect = 1e-24 Identities = 161/220 (73%), Gaps = 3/220 (1%) Strand=Plus/Minus Query 131801 AAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCTAATTTTTCTACAAGA 131860 |||||||| |||||||||| | ||||| |||| || | |||| || | || Sbjct 4333 AAGAAAGCTCAATGGGCTATGACTTGGATC---GATGGATCTCAAACTTTTGCTGAACGA 4277 Query 131861 CTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTT 131920 | |||||||| ||||||||||||||||| ||||| |||||| |||||| | || || Sbjct 4276 ATCGTAGCTTTCGCTTGTGTTGAAGGTATCTTCTTCTCAGGTAGCTTCTGTTCGATTTTC 4217 Query 131921 TGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGA 131980 ||||||||||| |||||| | ||||||||| | | || || || |||| ||||| || Sbjct 4216 TGGCTTAAGAAACGTGGACTCATGCCTGGATTAACCTTCTCTAACGAATTGATCTCACGA 4157 Query 131981 GATGAAGCATTGCATACTGAATTTGCTATATTAATCTATA 132020 || |||| || || ||| || ||| || ||||||| Sbjct 4156 GACGAAGGTTTACACTGTGATTTCGCTTGTTTGATCTATA 4117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1182749320610108