Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_025421.1
Length=29616
Score E
Sequences producing significant alignments: (Bits) Value
seq232480 89.7 1e-13
>seq232480
Length=511
Score = 89.7 bits (98), Expect = 1e-13
Identities = 166/242 (69%), Gaps = 4/242 (2%)
Strand=Plus/Plus
Query 24997 TTGCTAAGATCCTCAAGCAAAACGGAATTAACATTGGCTCTATTAGATTTTTCGCTTGGT 25056
|||| ||| | |||| || ||||| || ||||||| | | | || ||||| |||
Sbjct 1 TTGCCAAGGTAATCAAACAGAACGGCGTTGACATTGGTGCCAAGCGGTTGTTCGCATGGC 60
Query 25057 TACGTGACAACGGTTATTTAATCAAGCGGCAAGGCAGTGACTACAATTCACCAACGCAGT 25116
||||||| | || ||||| ||||| ||| || ||||| || || || || ||
Sbjct 61 TACGTGAGCAAGGATATTTGATCAAACGGATTGGTGCCGACTATAACTCGCCGACACAAC 120
Query 25117 ATTCAATGGAGCGTGGCTGGTTTGAGGTAAAAGAAACAACGGTCAACTACCCAGACGGCC 25176
| ||||||| |||| ||| ||||| ||||| || || ||| || | |||||||
Sbjct 121 GCGCGATGGAGCTAGGCTTGTTCGAGGTCAAAGAGACGGCGATCAGTCACTCGGACGGCC 180
Query 25177 --GCACCCTTGTTAAGAAGACTCCGAAAGTTACTGGAAAAGGCCAGCAATACTTCGTAAA 25234
| | | ||| ||||||| || || || || || ||||||||||| || || | ||
Sbjct 181 ATGTAACA--GTTCAGAAGACCCCAAAGGTGACCGGCAAAGGCCAGCAGTATTTTATCAA 238
Query 25235 CA 25236
||
Sbjct 239 CA 240
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 94349245348208
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |