Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_025421.1 Length=29616 Score E Sequences producing significant alignments: (Bits) Value seq232480 89.7 1e-13 >seq232480 Length=511 Score = 89.7 bits (98), Expect = 1e-13 Identities = 166/242 (69%), Gaps = 4/242 (2%) Strand=Plus/Plus Query 24997 TTGCTAAGATCCTCAAGCAAAACGGAATTAACATTGGCTCTATTAGATTTTTCGCTTGGT 25056 |||| ||| | |||| || ||||| || ||||||| | | | || ||||| ||| Sbjct 1 TTGCCAAGGTAATCAAACAGAACGGCGTTGACATTGGTGCCAAGCGGTTGTTCGCATGGC 60 Query 25057 TACGTGACAACGGTTATTTAATCAAGCGGCAAGGCAGTGACTACAATTCACCAACGCAGT 25116 ||||||| | || ||||| ||||| ||| || ||||| || || || || || Sbjct 61 TACGTGAGCAAGGATATTTGATCAAACGGATTGGTGCCGACTATAACTCGCCGACACAAC 120 Query 25117 ATTCAATGGAGCGTGGCTGGTTTGAGGTAAAAGAAACAACGGTCAACTACCCAGACGGCC 25176 | ||||||| |||| ||| ||||| ||||| || || ||| || | ||||||| Sbjct 121 GCGCGATGGAGCTAGGCTTGTTCGAGGTCAAAGAGACGGCGATCAGTCACTCGGACGGCC 180 Query 25177 --GCACCCTTGTTAAGAAGACTCCGAAAGTTACTGGAAAAGGCCAGCAATACTTCGTAAA 25234 | | | ||| ||||||| || || || || || ||||||||||| || || | || Sbjct 181 ATGTAACA--GTTCAGAAGACCCCAAAGGTGACCGGCAAAGGCCAGCAGTATTTTATCAA 238 Query 25235 CA 25236 || Sbjct 239 CA 240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 94349245348208