Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_025422.1 Length=155997 Score E Sequences producing significant alignments: (Bits) Value seq244327 102 8e-17 >seq244327 Length=1302 Score = 102 bits (112), Expect = 8e-17 Identities = 259/386 (67%), Gaps = 15/386 (4%) Strand=Plus/Plus Query 20316 ATGTTGCGAATGATATGAGTATAAGAGCGTGAGTGAATCGTCTCAAAAAACTCCCATGTC 20375 || || | ||| |||||||||||||| ||||||||||| || || |||| |||||| Sbjct 837 ATATTTCTAATAATATGAGTATAAGAACGTGAGTGAATAGTTTCCGAAAAAGACCATGTT 896 Query 20376 TTGAGCCATACTTCAATTTCAGGAAGAGAACAAATAGAAGCAAAAGCTTCAGAGGGGCCT 20435 | | ||| ||| | ||| |||| |||| ||| | |||||| || | | Sbjct 897 TCAATCCAGGTTTCTAATTCCGGAATAGAAATAATTGGTAGAAAAGCAATGTTAGGACTT 956 Query 20436 CGGCCTTGCACAGAGTC-AAGAACG----ATATTACGAGCTAG-AGGAAGTGTAAAAATT 20489 | ||||| | |||||| || || | ||||| | || | ||| ||| || Sbjct 957 CTTCCTTGAATAGAGTCTAATAATGTTTGATATTTTAAATTACTAAGAA----AAATATG 1012 Query 20490 TGTTGC-TGTTCATATGGAAGTTTCTTGAAATCTTTTGAATCTTTCGAGAGTTCTACTTC 20548 | || | |||||| | || ||| | |||||| || |||| ||||| |||| ||| Sbjct 1013 TTTTTCATGTTCAGGT--AAATTT-TGAAAATCTATTCTATCTCGAGAGAGATCTATTTC 1069 Query 20549 TTGAGGTCTCCAAAAGAAACCAAGTGCTTTGTCTGTTAATTTCTCGAACTGATTATATTT 20608 || |||||||||||| ||| ||| ||| || ||||||| || || ||||||||| Sbjct 1070 TTCAGGTCTCCAAAAAAAAGAGAGTTGTTTTTCAATTAATTTTTCAAAAATATTATATTT 1129 Query 20609 GACAGTATCATAACGAGCAATGTTCACCGGTTCTCCCAGGAACATTGGCTGTTTAAGATG 20668 |||||| || ||||| || || |||| ||| | ||||| || | || || || Sbjct 1130 TTGCTGATCATATCGGGCAATATTGACAGGTTGTCCAAAAAACATAGGTTCCTTTAGTTG 1189 Query 20669 ATCTACTTTGGTTGTGTTAAAAATTG 20694 || || ||| || | |||||||| Sbjct 1190 AT-TATTTTTTTTTTCGAAAAAATTG 1214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 497395356912160