Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_025429.1
Length=156446
Score E
Sequences producing significant alignments: (Bits) Value
seq125822 96.9 3e-15
>seq125822
Length=25115
Score = 96.9 bits (106), Expect = 3e-15
Identities = 377/588 (64%), Gaps = 30/588 (5%)
Strand=Plus/Plus
Query 142220 GGAACGGCGGAACGAAAGCAATCTTCGGTCATCAGATGCGTTTCAATCTGGCTCAAGGCT 142279
||||| |||||||| ||||| |||||||||||||| ||| | || | || |
Sbjct 7772 GGAAC--CGGAACGACCAGTATCTTTGGTCATCAGATGCGGTTCCCTTTGCAGGATGGAT 7829
Query 142280 TTCCTCTTCTCTCCACGAAGAAGCTGCATCTGAAGTCGATCATCGTCGAACTCCTGTGGT 142339
|||| | | | ||||| || | ||| |||||||||| ||| || | | ||||
Sbjct 7830 TTCCGATGGTGACGACGAAAAAATTACATATGAAGTCGATTATCCATGAGTTGATTTGGT 7889
Query 142340 TCCTCAAAGGCGATACGAACATCAAGTATCTTCACGATCACAACGTCAAGATCTGGGATG 142399
| || || || || ||||| |||||||| || || |||| ||| ||| | |
Sbjct 7890 TTATCTCGGGTGACACCAACATTTCATATCTTCAAGAAAACGGCGTCCGGATTTGGAACG 7949
Query 142400 AATGGGCTGATGCCAATGGCAACCTCGGACCTGTCTACGGCAAGCAGTGGATGTCCTGGA 142459
| ||||| || | | || || |||||||| || || ||| |||||| || |
Sbjct 7950 AGTGGGCGGACGAAGACGGGAATCTCGGACCGGTTTATGGCGCCCAGTGGCGTTCTTTCC 8009
Query 142460 CGAACCTCGTTGTCGCTGGAGATGACGTCACAGACGAACCGATCGATCAGATCCGCCGGA 142519
|||| | | || ||| ||| || | |||||| | ||||
Sbjct 8010 CGAAACCGGATG--------GAT-----------CGA--CGGTTGATCAGTTG-GCCGAT 8047
Query 142520 -TCATTACTGACTTGAAGAAGTCTCCTCATTCTCGTCGTCACATCGTCACCGCGTGGAAC 142578
|||| | | |||| | ||| |||||||||||| || |||| || |||||
Sbjct 8048 GTCATCGAGCAAATTAAGACGAATCCGGATTCTCGTCGTCTGATTGTCAGTGCTTGGAAT 8107
Query 142579 CCTGCTGAAGTCGACGACATGGCACTTCCTCCGTGTCACATGATGTTCCAATTCCACGTC 142638
|| | | || | || || ||||| | || || || ||| || |||| ||||| | |||
Sbjct 8108 CCCGGTCAATTAGAAGAGATGGCCTTGCCGCCCTGCCACCTGCTGTTTCAATTTTATGTC 8167
Query 142639 GACTCGAA-GAAGCGTCTGTCATGCCAGCTGTATCAGCGTTCGGCAGACTGGTTCCTCGG 142697
| |||| | | || |||| |||||||| || || || || || || || | ||
Sbjct 8168 G---CGAACGGAAAGT-TGTCGTGCCAGCTTTACCAACGGTCTGCCGATGTCTTTTTAGG 8223
Query 142698 CGTTCCGTTCAACATTGCTTCGTACGCGCTTCTCACACAGCTCATTGCTCGCGAATGCGG 142757
||||| || || |||||||| ||||| | || || || | ||||||| | ||
Sbjct 8224 TGTTCCATTTAATATTGCTTCTTACGCTTTGCTGACGCACATGATTGCTCATGTCTGTAA 8283
Query 142758 TCTGGAACTCGGAGACTTCGTCCACACCTTCGGCAATTCGCACATCTA 142805
|| ||| | || || ||||| || || || || || |||| |||||
Sbjct 8284 GCTTGAAGTTGGGGATTTCGTGCATACGTTAGGGGATGCGCATATCTA 8331
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 498827357497280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |