Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_025452.1 Length=155346 Score E Sequences producing significant alignments: (Bits) Value seq249645 116 4e-21 >seq249645 Length=476466 Score = 116 bits (128), Expect = 4e-21 Identities = 274/408 (67%), Gaps = 12/408 (3%) Strand=Plus/Minus Query 26878 GTTGATCTGAATACCGTAGTCGATGCGACGTTCGCGGTTCTCTTCTGTTCCACGGTTGTT 26937 ||| | ||| | |||||||| || |||| | ||||| ||||| || ||||| || Sbjct 264957 GTTTAACTGTACGCCGTAGTCCATATGACGGACACGGTTGTCTTCAACACCGCGGTTATT 264898 Query 26938 CTTCAGGAC----AACGACGTCATCGAACTGGTAG-TGCCACAGAGGGATGTACCCTGTC 26992 || || || || ||| || |||| || ||||| || ||| | || ||| Sbjct 264897 TTTGAGTACCAGTAATGAC----TC-AACTTCTAAATGCCATAGTGGGTAGAACAACGTC 264843 Query 26993 GCTGCACCGCCGCGAATGCCGCCCTGAGAGCACGACTTGAGCGCCCCAGTGAGATACTTG 27052 || |||||||| || | ||| || || ||||| | || | || || || | | || Sbjct 264842 GCAGCACCGCCACGTACGCCACCTTGTGAGCAGCATTTAA-CGGCCGTTTGGAACAATTT 264784 Query 27053 ATGAACGGGATCAG-GCCTGTATGAACCATCTCTCCGCCGCGAATAGGACTACCAATACC 27111 || || ||| | ||| ||||| || ||||| || ||||| ||||||| | Sbjct 264783 ATAAAAAGGAATACAGCCAGTATGCTGTGCTTCACCGCCACGGATAGGGCTACCAAGGGC 264724 Query 27112 ACGGATTGCCCCGAAGTCAAAACCGATACCAGCGCGTTTGGACACATAGTCAACGATGGT 27171 |||||| || || | ||||||||||| || | ||||||||| ||||||| Sbjct 264723 ACGGATACGACCTGCGTTGATGCCGATACCAGCACGCTGTGACACATAGCGTACGATGGC 264664 Query 27172 CTTGGCCGTTGCGTTGATAGAGTCCAGGGTGTCACCAGTCTTGATCAACACACATGAGCT 27231 | | || |||||||||||||| | | | |||||| | ||| || || || ||||| Sbjct 264663 GCTAGTGGTGGCGTTGATAGAGTCTAAGCTATCACCACATTCGATTAAGACGCACGAGCT 264604 Query 27232 GAACTGACGGGTAGGAGTACGAACACCGGCCATGATCGGGGTTGGAAG 27279 |||||||| | || ||||| ||||| | |||||| || ||||| || Sbjct 264603 AAACTGACGCGATGGCGTACGCACACCTGACATGATTGGCGTTGGTAG 264556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495319115529280