Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_025462.1
Length=99730
Score E
Sequences producing significant alignments: (Bits) Value
seq81543 107 1e-18
>seq81543
Length=132751
Score = 107 bits (118), Expect = 1e-18
Identities = 188/271 (69%), Gaps = 2/271 (1%)
Strand=Plus/Minus
Query 19935 CAAACCCAACATCACGAAGATTAATTGTATCAGGTTGGAATCCTCATGATGTTGCAGATG 19994
||| ||||| |||||| | | || ||||| |||||||| || || | | | | |
Sbjct 70874 CAATCCCAAT-TCACGACGCCTTATCGTATCGGGTTGGAACCCAGGAGAGGCCGAACAAG 70816
Query 19995 TAGATTTACCACCTTGCCATACACTATTTCAATTCTTTGTGAAAGATGGTAAATTATCTT 20054
| | || || || |||||||| |||||||| |||||||| || |||| | || |
Sbjct 70815 TCGCCTTGCCGCCCTGCCATACTCTATTTCAGTTCTTTGTCGCTGACAATAAACTGTCAT 70756
Query 20055 GCCAGTTGTATCAACGAAGTGCTGACTTATTACTTGGTGTTCCATTTAATATTGCATCTT 20114
||||| | ||||| || || || ||||| || ||||| ||||| ||||||||| |
Sbjct 70755 GCCAGCTATATCAGCGCTCAGCGGATTTATTCCTAGGTGTGCCATTCAATATTGCAAGCT 70696
Query 20115 ATGCTTTACTTACACACTTAGTTGCATTAGAATGTGGGCTTAATGTTGGTGAGTTTGTTT 20174
| || | | || ||| | || ||| | || || | | |||||||||||| | |
Sbjct 70695 ACGCGCTCTTGACCCACATGGTCGCACAGGTTTGCGGATTGGACGTTGGTGAGTTTATCT 70636
Query 20175 GGGTTGGTGGTGATTGCCACATTTACTCAAA 20205
|| || ||||||||||| ||||| |||||
Sbjct 70635 GGACAGGCGGTGATTGCCATATTTA-TCAAA 70606
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 317972231164628
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |