Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_025462.1 Length=99730 Score E Sequences producing significant alignments: (Bits) Value seq81543 107 1e-18 >seq81543 Length=132751 Score = 107 bits (118), Expect = 1e-18 Identities = 188/271 (69%), Gaps = 2/271 (1%) Strand=Plus/Minus Query 19935 CAAACCCAACATCACGAAGATTAATTGTATCAGGTTGGAATCCTCATGATGTTGCAGATG 19994 ||| ||||| |||||| | | || ||||| |||||||| || || | | | | | Sbjct 70874 CAATCCCAAT-TCACGACGCCTTATCGTATCGGGTTGGAACCCAGGAGAGGCCGAACAAG 70816 Query 19995 TAGATTTACCACCTTGCCATACACTATTTCAATTCTTTGTGAAAGATGGTAAATTATCTT 20054 | | || || || |||||||| |||||||| |||||||| || |||| | || | Sbjct 70815 TCGCCTTGCCGCCCTGCCATACTCTATTTCAGTTCTTTGTCGCTGACAATAAACTGTCAT 70756 Query 20055 GCCAGTTGTATCAACGAAGTGCTGACTTATTACTTGGTGTTCCATTTAATATTGCATCTT 20114 ||||| | ||||| || || || ||||| || ||||| ||||| ||||||||| | Sbjct 70755 GCCAGCTATATCAGCGCTCAGCGGATTTATTCCTAGGTGTGCCATTCAATATTGCAAGCT 70696 Query 20115 ATGCTTTACTTACACACTTAGTTGCATTAGAATGTGGGCTTAATGTTGGTGAGTTTGTTT 20174 | || | | || ||| | || ||| | || || | | |||||||||||| | | Sbjct 70695 ACGCGCTCTTGACCCACATGGTCGCACAGGTTTGCGGATTGGACGTTGGTGAGTTTATCT 70636 Query 20175 GGGTTGGTGGTGATTGCCACATTTACTCAAA 20205 || || ||||||||||| ||||| ||||| Sbjct 70635 GGACAGGCGGTGATTGCCATATTTA-TCAAA 70606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 317972231164628