Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_025830.1 Length=120938 Score E Sequences producing significant alignments: (Bits) Value seq249537 107 1e-18 seq158858 87.8 1e-12 >seq249537 Length=1253 Score = 107 bits (118), Expect = 1e-18 Identities = 64/67 (96%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 9587 TGGCCCCTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCACCTGCTCTAACCACT 9646 |||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||| Sbjct 69 TGGCCCCTGCTGGATTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCTCTTACCACT 10 Query 9647 GAGCTAA 9653 ||||||| Sbjct 9 GAGCTAA 3 >seq158858 Length=235449 Score = 87.8 bits (96), Expect = 1e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 10812 ACAGCACCAGTAGCTTTTACAGCCATACCCAGAGAATCGCGGGTTGTGTATTGCGTTGTA 10871 |||||| |||||||| | ||| | || ||||||||||| || ||||| ||| Sbjct 214850 ACAGCATATGTAGCTTTCATAGCAAACCCTAGAGAATCGCGAGTCTGATATTGGAAAGTA 214791 Query 10872 TAAGAACCTACACCAAACACAATGTTACTGGAAGCAAATCCTCGTTCTTCAAGGCGCTCA 10931 ||||| || || || || |||| ||| | |||||||| ||| |||||| | |||| Sbjct 214790 TAAGATCCCACGCCGAAAACAACGTTTGTTGAAGCAAAGCCTTTTTCTTCTAACTTCTCA 214731 Query 10932 AAGATCTCTTTAGCACGAGAGATTGTGATAGAGTCTCCGTAGATTAATCCAACATGGCTA 10991 | || |||| ||||| | || |||||||| || |||||| |||| ||| || Sbjct 214730 ACAATAGCTTTTGCACGCTCAAGAGTAATAGAGTCACCATAGATTGCACCAATATGAGTA 214671 Query 10992 TCAAGAACTTTGTAACCC 11009 || | | ||| |||||| Sbjct 214670 TCTAATAGTTTATAACCC 214653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385616803679092