Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04]
267,228 sequences; 342,306,570 total letters
Query= NC_025830.1
Length=120938
Score E
Sequences producing significant alignments: (Bits) Value
seq249537 107 1e-18
seq158858 87.8 1e-12
>seq249537
Length=1253
Score = 107 bits (118), Expect = 1e-18
Identities = 64/67 (96%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 9587 TGGCCCCTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCACCTGCTCTAACCACT 9646
|||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct 69 TGGCCCCTGCTGGATTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCTCTTACCACT 10
Query 9647 GAGCTAA 9653
|||||||
Sbjct 9 GAGCTAA 3
>seq158858
Length=235449
Score = 87.8 bits (96), Expect = 1e-12
Identities = 138/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 10812 ACAGCACCAGTAGCTTTTACAGCCATACCCAGAGAATCGCGGGTTGTGTATTGCGTTGTA 10871
|||||| |||||||| | ||| | || ||||||||||| || ||||| |||
Sbjct 214850 ACAGCATATGTAGCTTTCATAGCAAACCCTAGAGAATCGCGAGTCTGATATTGGAAAGTA 214791
Query 10872 TAAGAACCTACACCAAACACAATGTTACTGGAAGCAAATCCTCGTTCTTCAAGGCGCTCA 10931
||||| || || || || |||| ||| | |||||||| ||| |||||| | ||||
Sbjct 214790 TAAGATCCCACGCCGAAAACAACGTTTGTTGAAGCAAAGCCTTTTTCTTCTAACTTCTCA 214731
Query 10932 AAGATCTCTTTAGCACGAGAGATTGTGATAGAGTCTCCGTAGATTAATCCAACATGGCTA 10991
| || |||| ||||| | || |||||||| || |||||| |||| ||| ||
Sbjct 214730 ACAATAGCTTTTGCACGCTCAAGAGTAATAGAGTCACCATAGATTGCACCAATATGAGTA 214671
Query 10992 TCAAGAACTTTGTAACCC 11009
|| | | ||| ||||||
Sbjct 214670 TCTAATAGTTTATAACCC 214653
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385616803679092
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |