Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Arabis_20nordmanniana_20[genbank_20GCA_5F001484925.1_202016-01-04] 267,228 sequences; 342,306,570 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq255492 91.5 2e-13 seq34509 91.5 2e-13 >seq255492 Length=11799 Score = 91.5 bits (100), Expect = 2e-13 Identities = 114/154 (74%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 146994 CACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAG 147053 |||||| || | ||| | || || || |||||| || ||||| || || || || || Sbjct 6513 CACGTGAGCGAGTATGCAAGTAAGAAGAGAGTAGGAAGCAATGTTAAACGGCACACCAAG 6572 Query 147054 GCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAA 147113 ||||||||| | || | ||| |||| || || ||||||||||| || || || || || Sbjct 6573 ACCCATGTCCGCTGAACGCTGATACATTTGACATGAGAGCTCCCCTTCTGCTACATAGAA 6632 Query 147114 CTG-GCACAGGATGTGGCACGGCGGCAGCGCCAT 147146 ||| ||| | |||||||| || || |||||||| Sbjct 6633 CTGTGCA-AACATGTGGCATGGAGGAAGCGCCAT 6665 >seq34509 Length=4973 Score = 91.5 bits (100), Expect = 2e-13 Identities = 114/154 (74%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 146994 CACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAG 147053 |||||| || | ||| | || || || |||||| || ||||| || || || || || Sbjct 2489 CACGTGAGCGAGTATGCAAGTAAGAAGAGAGTAGGACGCAATGTTAAACGGCACACCAAG 2430 Query 147054 GCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAA 147113 |||||||| | || | ||| |||| || || |||||||||||||| ||||| || || Sbjct 2429 ACCCATGTCTGCTGAACGCTGATACATTTGACATGAGAGCTCCCCGTCTGCCACATAGAA 2370 Query 147114 CTG-GCACAGGATGTGGCACGGCGGCAGCGCCAT 147146 ||| ||| | |||||||| || || || ||||| Sbjct 2369 CTGTGCA-AACATGTGGCATGGAGGAAGTGCCAT 2337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 581538945859200